KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:34 2014 Check: 00 .. Name: ENSP00000265316/1-842 Len: 844 Check: 3828 Weight: 1.00 Name: ENSBTAP00000027459/1-843 Len: 844 Check: 9602 Weight: 1.00 Name: ENSTTRP00000009513/1-844 Len: 844 Check: 3067 Weight: 1.00 Name: bmy_13375T0/1-844 Len: 844 Check: 7626 Weight: 1.00 Name: BACU012721/1-844 Len: 844 Check: 7030 Weight: 1.00 // 1 50 ENSP00000265316/1-842 MVTVGNYCEA EGPVGPAWMQ DGLSPCFFFT LVPSTRMALG TLALVLALPC ENSBTAP00000027459/1-843 MVTVGNFCEA EGPAGPVWAK GGLSPCFFFT LVPSILMALG ALALVPAFPC ENSTTRP00000009513/1-844 MVTVGNYCEA EGPAGPVWAK GGLSPCFFFT LVPSTLMGLG ALALVPVLPC bmy_13375T0/1-844 MVTVGNYCEA EGPAGPVWAK GGLSPCFFFT LVPSTLMGLG ALALVPVLPC BACU012721/1-844 MVTVGNYCEA EGPAGPVWAK GGLSPCFFFT LVPSTLMGLG ALALVPVLPC 51 100 ENSP00000265316/1-842 RRRERPAGAD SLSWGAGPRI SPYVLQLLLA TLQAALPLAG LAGRVGTARG ENSBTAP00000027459/1-843 RRPEGPGGAD RVSWAAGPRV APYVLQLLLA TLQVALPLAG LVGRVGTAQG ENSTTRP00000009513/1-844 KRPEQPGGAD AVSWAAGPRV APYVLQLLLA TLQVALPLAG LVGRVGAAQG bmy_13375T0/1-844 KRPERPGGAD AVSWAAGPRV APYVLQLLLA TLQVALPLAG LVGRVGTAQG BACU012721/1-844 KRPERPGGAD AVSWAAGPRV APYVLQLLLA TLQVALPLAG LVGRVGTAQG 101 150 ENSP00000265316/1-842 APLPSYLLLA SVLESLAGAC GLWLLVVERS QARQRLAMGI WIKFRHSPGL ENSBTAP00000027459/1-843 APLPGYLFLA SVLGTVASAC GLAMLVTERS QALQKLAMGV WIKFRHSPGL ENSTTRP00000009513/1-844 APLPGYLLLA SLLGTVASAC GLGLLVVERS QARQKLAMGV WIKFTHSPGL bmy_13375T0/1-844 APLPGYLLLA SVLGTVASAC GLGLLVVERS QARQKLAMGV WIKFTHSPGL BACU012721/1-844 APLPGYLLLA SVLGTVASAC GLGLLVVERS QARQKLAMGV WIKFTHSPGL 151 200 ENSP00000265316/1-842 LLLWTVAFAA ENLALVSWNS PQWWWARADL GQQVQFSLWV LRYVVSGGLF ENSBTAP00000027459/1-843 LLLWTVSFAA ENLALVSWNN PQWWWARANL SQQVQFSLWV LRYVVSGGLF ENSTTRP00000009513/1-844 LLLWTVAFAA ENLALVSWNS PQWWWARANL SQQVQFSLWV LRYVVSGGLF bmy_13375T0/1-844 LLLWTVAFAA ENLALVSWNS PQWWWARANL SQQVQFSLWV LRYVVSGGLF BACU012721/1-844 LLLWTVAFAA ENLALVSWNS PQWWWARANL SQQVQFSLWV LRYVVSGGLF 201 250 ENSP00000265316/1-842 VLGLWAPGLR PQSYTLQVHE EDQDVERSQV RSA--AQQST WRDFGRKLRL ENSBTAP00000027459/1-843 VLGLWAPGLR PQSYTLRVNE EDQDVERSQV PSTEGPPRST WRDLGRKLRL ENSTTRP00000009513/1-844 VLGLWAPGLR PQSYTLRVNE EDQDVDRSQV QSTEGPPRST WQDLGRKLRL bmy_13375T0/1-844 VLGLWAPGLR PQSYTLRVNE EDQDVDRSQV QSTEGPPRST WQDLGRKLRL BACU012721/1-844 VLGLWAPGLR PQSYTLRVNE EDQDVDRSQV QSTEEPPRST WQDLGRKLRL 251 300 ENSP00000265316/1-842 LSGYLWPRGS PALQLVVLIC LGLMGLERAL NVLVPIFYRN IVNLLTEKAP ENSBTAP00000027459/1-843 LSGYLWPRGS PALQFVVLIC LGLMGLERGL NVLVPIFYRD IVNLLTQKAP ENSTTRP00000009513/1-844 LSGYLWPRGS PALQFVVLIC LGLMVLDRGL NVLVPIFYRD IVNLLTQKAP bmy_13375T0/1-844 LSGYLWPRGS PALQFVVLIC LGLMGLDRGL NVLVPIFYRD IVNLLTQKAP BACU012721/1-844 LSGYLWPRGS PALQFVVLIC LGLMGLDRGL NVLVPIFYRD IVNLLTQKAP 301 350 ENSP00000265316/1-842 WNSLAWTVTS YVFLKFLQGG GTGSTGFVSN LRTFLWIRVQ QFTSRRVELL ENSBTAP00000027459/1-843 WNSLVWTVII YVFLKFLQGG GTGSTGFVTN LRTFLWIRVQ QFTSRQVELR ENSTTRP00000009513/1-844 WSSLVWTVIT YVFLKFLQGG GTGSTGFVSN LRTFLWIRVQ QFTSRHVELR bmy_13375T0/1-844 WSSLVWTVII YVFLKFLQGG GTGSTGFVSN LRTFLWIRVQ QFTSRQVELR BACU012721/1-844 WSSLVWTVII YVFLKFLQGG GTGSTGFVSN LRTFLWIRVQ QFTSRQVELR 351 400 ENSP00000265316/1-842 IFSHLHELSL RWHLGRRTGE VLRIADRGTS SVTGLLSYLV FNVIPTLADI ENSBTAP00000027459/1-843 LFSHLHELSL RWHLGRRTGE VLRIVDRGTS SVTGLLSYLV FNIIPTLADI ENSTTRP00000009513/1-844 LFSHLHELSL RWHLGRRTGE VLRIVXXXXX XXXXXXXYLV FNVIPTLADI bmy_13375T0/1-844 LFSHLHELSL HWHLGRRTGE VLRIVDRGTS SVTGLLSYLV FNIIPTLADI BACU012721/1-844 LFSHLHELSL HWHLGRRTGE VLRIVDRGTS SVTGLLSYLV FNIIPTLADI 401 450 ENSP00000265316/1-842 IIGIIYFSMF FNAWFGLIVF LCMSLYLTLT IVVTEWRTKF RRAMNTQENA ENSBTAP00000027459/1-843 IIGIVYFSMF FNAWFGLIVF LCMGFYLALT IVVTEWRTKF RRAMNMQENA ENSTTRP00000009513/1-844 IIGIIYFSMF FNAWFGLIVF LCMSLYLALT IVVTEWRTKF RRAMNTQENA bmy_13375T0/1-844 IIGIIYFSMF FNAWFGLIVF LCMSLYLALT IVVTEWRTKF RRAMNTQENA BACU012721/1-844 IIGIIYFSMF FNAWFGLIVF LCMSLYLALT IVVTEWRTKF RRAMNTQENA 451 500 ENSP00000265316/1-842 TRARAVDSLL NFETVKYYNA ESYEVERYRE AIIKYQGLEW KSSASLVLLN ENSBTAP00000027459/1-843 TRARAVDSLL NFETVKYYNA ESYEVERYRE AIIKYQSLEW KSNASLVLLN ENSTTRP00000009513/1-844 TRARAVDSLL NFETVKYYNA ESYEVERYRE AIIKYQGLEW KSSASLVLLN bmy_13375T0/1-844 TRARAVDSLL NFETVKYYNA ESYEVERYRE AIIKYQGLEW KSSASLVLLN BACU012721/1-844 TRARAVDSLL NFETVKYYNA ESYEVERYRE AIIKYQGLEW KSSASLVLLN 501 550 ENSP00000265316/1-842 QTQNLVIGLG LLAGSLLCAY FVTEQKLQVG DYVLFGTYII QLYMPLNWFG ENSBTAP00000027459/1-843 QTQNLVIGLG LLAGSLLCAY FVTEQKLQVG DFVLFGTYII QLYMPLNWFG ENSTTRP00000009513/1-844 QTQNLVIGLG LLSGSLLCAY FVSEQKLQVG DFVLFGTYII QLYMPLNWFG bmy_13375T0/1-844 QTQNLVIGLG LLSGSLLCAY FVSEQKLQVG DFVLFGTYII QLYMPLNWFG BACU012721/1-844 QTQNLVIGLG LLSGSLLCAY FVSEQKLQVG DFVLFGTYII QLYMPLNWFG 551 600 ENSP00000265316/1-842 TYYRMIQTNF IDMENMFDLL KEETEVKDLP GAGPLRFQKG RIEFENVHFS ENSBTAP00000027459/1-843 TYYRMIQTNF IDMENMFDLL KEKTEVKDLP GAGPLRFQRG QIEFENVHFS ENSTTRP00000009513/1-844 TYYRMIQTNF IDMENMFDLL KEETEVKDLP GAGPLHFQRG QIEFENVHFS bmy_13375T0/1-844 TYYRMIQTNF IDMENMFDLL KEETEVKDLP GAGPLHFQRG QIEFENVHFS BACU012721/1-844 TYYRMIQTNF IDMENMFDLL KEETEVKDLP GAGPLHFQRG QIEFENVHFS 601 650 ENSP00000265316/1-842 YADGRETLQD VSFTVMPGQT LALVGPSGAG KSTILRLLFR FYDISSGCIR ENSBTAP00000027459/1-843 YTDGRETLQD VSFTVMPGQT LALVGPSGAG KSTVLRLLFR FYDISSGCIR ENSTTRP00000009513/1-844 YTNGRETLQD VSFTVMPGQT LALVGPSGAG KSTILRLLFR FYDISSGCIR bmy_13375T0/1-844 YTDGRETLQD VSFTVMPGQT LALVGPSGAG KSTILRLLFR FYDVSSGCIR BACU012721/1-844 YTDGRETLQD VSFTVMPGQT LALVGPSGAG KSTILRLLFR FYDISSGCIR 651 700 ENSP00000265316/1-842 IDGQDISQVT QASLRSHIGV VPQDTVLFND TIADNIRYGR VTAGNDEVEA ENSBTAP00000027459/1-843 IDGQDVSQVT QASLRSHIGV VPQDTVLFND TIANNIRYGR ITAGNDEVKA ENSTTRP00000009513/1-844 IDGQNIPQVT QVSLRSHIGV VPQDTVLFND TIANNIRYGR ITAGNDEVKA bmy_13375T0/1-844 IDGQNISQVT QVSLRSHIGV VPQDTVLFND TIANNIRYGR ITAGNDEVKA BACU012721/1-844 IDGQNISQVT QVSLRSHIGV VPQDTVLFND TIANNIRYGR ITAGNDEVKA 701 750 ENSP00000265316/1-842 AAQAAGIHDA IMAFPEGYRT QVGERGLKLS GGEKQRVAIA RTILKAPGII ENSBTAP00000027459/1-843 AAQAAGIHDT ITAFPEGYDT QVGERGLKLS GGEKQRVAIA RTILKAPDIV ENSTTRP00000009513/1-844 AAQAAGIHDT IMAFPEGYDT QVGERGLKLS GGEKQRVAIA RTILKAPDII bmy_13375T0/1-844 AAQAAGIHDP IMAFPEGYDT QVGERGLKLS GGEKQRVAIA RTILKAPDIV BACU012721/1-844 AAQAAGIHDT IMAFAEGYDT QVGERGLKLS GGEKQRVAIA RTILKAPDIV 751 800 ENSP00000265316/1-842 LLDEATSALD TSNERAIQAS LAKVCANRTT IVVAHRLSTV VNADQILVIK ENSBTAP00000027459/1-843 LLDEATSALD THNERAIQAS LAKVCANRTT IVVAHRLSTV VSADQILVIK ENSTTRP00000009513/1-844 LLDEATSALD TSNERAIQAS LAKVCTNRTT IVVAHRLSTV VSADQILVVK bmy_13375T0/1-844 LLDEATSALD TPNERAIQAS LAKVCANRTT IVVAHRLSTV VSADQILVIK BACU012721/1-844 LLDEATSALD TPNERAIQAS LAKVCANRTT IVVAHRLSTV VSADQILVIK 801 850 ENSP00000265316/1-842 DGCIVERGRH EALLSRGGVY ADMWQLQQGQ EETSEDTKPQ TMER ENSBTAP00000027459/1-843 DGRIVERGRH EALLSRGGVY ADMWQLQQQG QEVPEDTKPQ TKA- ENSTTRP00000009513/1-844 DGCIVERGRH EALLSRGGVY ADMWQLQQQG QEVSEDTKPQ TKAW bmy_13375T0/1-844 DGCIVERGRH EALLSRGGVY ADMWQLQQQG QEVSEDTKPQ TKAW BACU012721/1-844 DGCIVERGRH EALLSRGGVY ADMWQLQQQG QEVSEDTKPQ TKAW