KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:36 2014 Check: 00 .. Name: ENSP00000295759/1-654 Len: 654 Check: 6734 Weight: 1.00 Name: ENSBTAP00000027467/1-647 Len: 654 Check: 6007 Weight: 1.00 Name: ENSTTRP00000009522/1-649 Len: 654 Check: 5049 Weight: 1.00 Name: bmy_13378T0/1-593 Len: 654 Check: 8417 Weight: 1.00 Name: BACU012723/1-552 Len: 654 Check: 2884 Weight: 1.00 // 1 50 ENSP00000295759/1-654 MAPKKLSCLR SLLLPLSLTL LLPQADTRSF VVDRGHDRFL LDGAPFRYVS ENSBTAP00000027467/1-647 MAPKKPLCLP FLLLPL-LTL LLPQADARSF VVDRDHNRFL LDGAPFRYVS ENSTTRP00000009522/1-649 MAPQKLLCLP SLLLLL-LTR LLPQADTRSF VVDRDHDRFL LDGAPFRYVS bmy_13378T0/1-593 MAPKKLLCLP SLLLPL-LTL LLPQADTRSF VVDPDHDRFL LDGAPFRYVS BACU012723/1-552 MAPKKLLCLP SLLLPL-LTL LLPQADTRSF VVDPDHDRFL LDGAPFRYVS 51 100 ENSP00000295759/1-654 GSLHYFRVPR VLWADRLLKM RWSGLNAIQF YVPWNYHEPQ PGVYNFNGSR ENSBTAP00000027467/1-647 GSLHYFRVPR VLWADRLLKM RMSGLNVVQF YVPWNYHEPE PGVYNFNGSR ENSTTRP00000009522/1-649 GSLHYFRVPR VLWADRLFKM RMSGLNAVQF YVPWNYHEPE PGVYNFNASR bmy_13378T0/1-593 GSLHYFRVPR VLWADRLFKM RMSGLNAVQF YVPWNYHEPE PGVYKFNGSR BACU012723/1-552 GSLHYFRVPR VLWADRLFKM RMSGLNAVQF YVPWNYHEPE PGVYKFNGSR 101 150 ENSP00000295759/1-654 DLIAFLNEAA LANLLVILRP GPYICAEWEM GGLPSWLLRK PEIHLRTSDP ENSBTAP00000027467/1-647 DLFAFLKEAT LANLLVILRP GPYICAEWEM GGLPAWLLRK PKIHLRTSDP ENSTTRP00000009522/1-649 DLFAFLKEAT LANLLVILRP GPYICAEWEM GGLPAWLLRK PKIRLRTSDP bmy_13378T0/1-593 DLFAFLKEAT LANLLVILRP GPYICAEWEM ---------- ---------- BACU012723/1-552 DLFAFLKEAT LANLLVILRP GPYICAEWEM GGLPAWLLRK PKIHLRTSDP 151 200 ENSP00000295759/1-654 DFLAAVDSWF KVLLPKIYPW LYHNGGNIIS IQVENEYGSY RACDFSYMRH ENSBTAP00000027467/1-647 DFLAAVDSWF KVLLPRIYPW LYHNGGNIIS IQVENEYGSY RACDVSYMRH ENSTTRP00000009522/1-649 DFLAAVDSWF KVLLPKIHPW LYHNGGNIIS IQVENEYGSY GACDMSYMRH bmy_13378T0/1-593 ---------- -VLLPKIHPW LYHNGGNIIS IQVENEYGSY RACDMSYMRH BACU012723/1-552 DFLAAVDSWF KVLLPKIHPW LYHNGGNIIS IQVENEYGSY RACDMSYMRH 201 250 ENSP00000295759/1-654 LAGLFRALLG EKILLFTTDG PEGLKCGSLR GLYTTVDFGP ADNMTKIFTL ENSBTAP00000027467/1-647 LAGLFRALLG DRILLFTTDG PEGLKCGSLQ GLYTTVDFGP ADNMTKIFGL ENSTTRP00000009522/1-649 LAGLFRALLG DKILLFTTDG PEGLKCGSLQ GLYTTIDFGP ADNMTKIFAL bmy_13378T0/1-593 LAGLFRALLG DKILLFTTDG PEGLKCGSLQ GLYTTIDFGP ADNMTKIFAL BACU012723/1-552 LAGLFRALLG DKILLFTTDG PEGLKCGSLQ GLYTTIDFGP ADNMTKIFAL 251 300 ENSP00000295759/1-654 LRKYEPHGPL VNSEYYTGWL DYWGQNHSTR SVSAVTKGLE NMLKLGASVN ENSBTAP00000027467/1-647 LRKYEPRGPL VNSEYYTGWL DYWGQNHSTR SIPAVTKGLE KMLKLGASVN ENSTTRP00000009522/1-649 LRKYEPRGPL VNSEYYTGWL DYWGQNHSTR SVPAVTKGLE NMLKLGASVN bmy_13378T0/1-593 LRKYEPRGPL VNSEYYTGWL DYWGQNHSTR SVPAVTKGLE NMLKLGASVN BACU012723/1-552 LRKYEPRGPL VNSEYYTGWL DYWGQNHSTR SVPAVTKGLE NMLKLGASVN 301 350 ENSP00000295759/1-654 MYMFHGGTNF GYWNGADKKG RFLPITTSYD YDAPISEAGD PTPKLFALRD ENSBTAP00000027467/1-647 MYMFHGGTNF GYWNGADEKG RFLPITTSYD YDAPISEAGD PTPKLFAIRN ENSTTRP00000009522/1-649 MYMFHGGTNF GYWNGADEKG RFLPITTSYD YDAPISEAGD PTPKLFAIRN bmy_13378T0/1-593 MYMFHGGTNF GYWNGADEKG RFLPITTSYD YDAPISEAGD PTPKLFAIRN BACU012723/1-552 MYMYHGGTNF GYWNGADEKG RFLPITTSYD YDAPISEAGD PTPKLFAIRN 351 400 ENSP00000295759/1-654 VISKFQEVPL GPLPPPSPKM MLGPVTLHLV GHLLAFLDLL CPRGPIHSIL ENSBTAP00000027467/1-647 VISKFQEVPL GPLPPPSPKM TLGPLNLHLD GNLLDFLDFL CPQGPIHSVL ENSTTRP00000009522/1-649 VISKFQEVPL GPLPPPSPKM MLGPLSLHLD GNLLAFLDFL CPQGPIHSIL bmy_13378T0/1-593 VISK------ ---------- ---------D GNLLAFLDFL CPQGPIHSIL BACU012723/1-552 VISK------ ---------- ---------D GNLLAFLDFL CPQGPIHSIL 401 450 ENSP00000295759/1-654 PMTFEAVKQD HGFMLYRTYM THTIFEPTPF WVPNNGVHDR AYVMVDGVFQ ENSBTAP00000027467/1-647 PMTFEAVNQV HGYMLYRTYL PHTVSEPTQL WVPNNGVHDR AYVMVDGVFQ ENSTTRP00000009522/1-649 PMTFEAVNQD HGYMLYRTYL IHTVSEPAQF WVPNNGVHDR AYVMVDGVFQ bmy_13378T0/1-593 PMTFEAVNQD HGYMLYRTYL THTVSEPTQF WVPNNGVHDR AYVMVDGVFQ BACU012723/1-552 PMTFEAVNQD HGYMLYRTYL THTVSEPTQF WVPNNGVHDR AYVMVDGVFQ 451 500 ENSP00000295759/1-654 GVVERNMRDK LFLTGKLGSK LDILVENMGR LSFGSNSSDF KGLLKPPILG ENSBTAP00000027467/1-647 GVLERNMKHN LFLMGKIGAT LDVLLENMGR LSFGSNSSDF KGLLQPPILG ENSTTRP00000009522/1-649 GVLERNMKHN LFLTGKKGAK LDVLLENMGR LSFGSNSSDF KGLLEPPILG bmy_13378T0/1-593 GVLERNMKRN LFLMGKKGAK LDVLLENMGR LSFGSNSSDF KGLLEPPILG BACU012723/1-552 GVLERNMKRN LFLTGKKGAK LDVLLENMGR LSFGSNSSDF ---------- 501 550 ENSP00000295759/1-654 QTILTQWMMF PLKIDNLVKW WFPLQLPKWP YPQAPSGPTF YSKTFPILGS ENSBTAP00000027467/1-647 QTILTQWLMF PLKVDNLVKG WFPIQPLKHS HPQTPSGPTF YSTTFPILNS ENSTTRP00000009522/1-649 QTVLTQWLMF PLKVDNLVKW RFPNQLLKSS HPQTPSGPTF YSTTFPILDS bmy_13378T0/1-593 QTVLTQWLMF PLKVDNLVKW WFPNQLLKSS HPQTPSGPTF YSTTFPILDS BACU012723/1-552 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000295759/1-654 VGDTFLYLPG WTKGQVWING FNLGRYWTKQ GPQQTLYVPR FLLFPRGALN ENSBTAP00000027467/1-647 GGDTFLFLPG WTKGQVWING FNLGRYWTKR GPQQTLYVPR PLLFPRGAHN ENSTTRP00000009522/1-649 GGDTFLFLPG WTKGQVWING FNLGRYWTKR GPQQTLYVPR PLLFPRGALN bmy_13378T0/1-593 GGDTFLFLPG WTKGQVWING FNLGRYWTKR GPQQTLYVPR PLLFPRGALN BACU012723/1-552 ---------- --KGQVWING FNLGRYWTKR GPQQTLYVPR PLLFPRGALN 601 650 ENSP00000295759/1-654 KITLLELEDV PLQPQVQFLD KPILNSTSTL HRTHINSLSA DTLSASEPME ENSBTAP00000027467/1-647 RITLLELENV PPQPQIQFLD RPILNSTK-- HRTYVYSLS- ---SASEPME ENSTTRP00000009522/1-649 KITLLELENV PLRPQIQFLD RPILNGTV-- HKTHICSLSA E--SASEPME bmy_13378T0/1-593 KITLLELENV PLQPQIQFLD RPILNSTM-- HKTYIYSLSA E--SASEPME BACU012723/1-552 KITLLELENV PLQPQIQFLD RPILNSTV-- HKTYIYSLSA E--SASERME 651 700 ENSP00000295759/1-654 LSGH ENSBTAP00000027467/1-647 LSGH ENSTTRP00000009522/1-649 LSGH bmy_13378T0/1-593 LSGH BACU012723/1-552 LSGH