KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:36 2014 Check: 00 .. Name: ENSP00000292574/1-499 Len: 500 Check: 5864 Weight: 1.00 Name: ENSBTAP00000027472/1-500 Len: 500 Check: 8110 Weight: 1.00 Name: ENSTTRP00000013772/1-497 Len: 500 Check: 7262 Weight: 1.00 Name: bmy_22425T0/1-464 Len: 500 Check: 5583 Weight: 1.00 Name: BACU004867/1-499 Len: 500 Check: 5634 Weight: 1.00 // 1 50 ENSP00000292574/1-499 MRVLVPPAER SQDTRVGAPA WREAAQAMAR TAHILTDRCG QEAVTMWQPK ENSBTAP00000027472/1-500 MPVLIPPVEH SQDTRVGHPA WREATRALAE EAHQLTDRCG QEAVTMWQPN ENSTTRP00000013772/1-497 MPVLIPPVEH SQDTRVGPPA WREATKALTQ KAHQLTDRCG REAVTMWQPK bmy_22425T0/1-464 MPVLIPPVEH SQDTRVGPPA WREATKALTQ KAHQLTDRCG QEAVTMWQPK BACU004867/1-499 MPVLIPPVEH SQDTRVGPPA WREATKALTQ KAHQLTDRCG QEAVTMWQPK 51 100 ENSP00000292574/1-499 DSVLDPNVAH HLGRAAYIQP WRFRVEMIKG GGTLEKPPPG EGVTLWKGKM ENSBTAP00000027472/1-500 ESVRDPHVAH HLCRAAYILP WRFRVEMLKG GSTMEKPPPG EGVTLWKSKM ENSTTRP00000013772/1-497 DSVRDPHMAR HLGRAAYILP WRFRVEMLKG GSTMEKPPPG EGVTLWKGKM bmy_22425T0/1-464 DSVRDPHMAR HLCRAAYILP WRFRVEMLKG GSTMEKPPPG EGVTLWKGKM BACU004867/1-499 DSVRDPHVAR HLCRAAYILP WRFRVEMLKG GSTMEKPPPG EGVTLWKGKM 101 150 ENSP00000292574/1-499 KPPAWYARLP LPLHRKARAL QTTEVVHAHA RGARLTAARL GRAQHQINGR ENSBTAP00000027472/1-500 KPPAWHARLP LPMHRDARAL QTAEVVQAHA RGARLTAARL GRAQHQINGQ ENSTTRP00000013772/1-497 KPPAWNARLP LPMHRDARAL QTAEVVHAHA RGARLTAARL SRAQHQINGQ bmy_22425T0/1-464 KPPAWHARLP LPIHRDARAL QTAEVVHAHA RGARLTAARL SRAQHQINGQ BACU004867/1-499 KPPAWHARLP LPVHRDARAL QTAEVVHAHA RGARLTAARL SRAQHQINGQ 151 200 ENSP00000292574/1-499 VRQLLRQREV TDHRLSEVRK GLLINQQSVK LRGYRPKSEK VPDKADSMLT ENSBTAP00000027472/1-500 LRLLQRQREA TDRRLSEVRK ALLINQQSVK LRGYRPKSET ISDKADSMLT ENSTTRP00000013772/1-497 LRLLQRQREA TDHRLSEVRK ALLINQQSVK LRGYRPKSEK IPDKADSMLT bmy_22425T0/1-464 LRLLQRQREA TDHRLSEVRK ALLINQQSVK LRGYRPKSE- ---------- BACU004867/1-499 LRLLQRQREA TDHRLSEVRK ALLINQQSVK LRGYRPKSEK IPDKADRMLT 201 250 ENSP00000292574/1-499 WEKEELKSMK RKMERDMEKS EVLLKTLASC RDTLNFCFKE RLQAVDLMNQ ENSBTAP00000027472/1-500 WEKEELKSMK RKMEADMEKS EALLKTLASC RDALVFCCKE RLQAVELMNQ ENSTTRP00000013772/1-497 WEKEELKKMK RKMEEDMEKS EALLKTLASC RDTLVFCCKE RLQAAELMNQ bmy_22425T0/1-464 ---------- ---------- ----KTLASC RDTLVFCCKE RLQAVELMNQ BACU004867/1-499 WEKEELKRMK RKMEKDMEKS EALLKTLASC RDTLVFCCKE RLQAVELMNQ 251 300 ENSP00000292574/1-499 PLDKVLEQAR RHSWVNLSRA PTPRTQGQKT PPPDPVGTYN PACALALNEA ENSBTAP00000027472/1-500 PLDKVLEQAG RHSWVNISRV PTPRTQGLKT PPPDPVGTYT PECAKALYEA ENSTTRP00000013772/1-497 PLDKILEQAG RHSWVTLSRV PTPRTQGLKT PPPDPVGTYT PECATALYEA bmy_22425T0/1-464 PLDKVLEQAG RHSWVNLSRV PTPRTQGLKT PPPDPVGTYT PECATALYEA BACU004867/1-499 PLDKVLEQAG RHSWVNLSRV PTPRTQGLKT PPPDPVGTYT PECATALCEA 301 350 ENSP00000292574/1-499 KRLLVESKDT LVEMAKNEVD VREQQLQISD RVCASLAQKA SETLELKERL ENSBTAP00000027472/1-500 KRLLMESKDT LLDMAKNEED IREQQQQISD RVCASLAQKM RETLELKDRL ENSTTRP00000013772/1-497 KRLLMESKDT LLDMAKNEED IREQLQQISD HVCASLAQKM RETLELKDRL bmy_22425T0/1-464 KRLLMESKDT LLDMAKNEED IREQQQQISD RVCASLAQKM RETLELKDRL BACU004867/1-499 KRLLMESKDT LLDMAKNEED IRGQQQQISD RVCASLAQKM RETLELKDML 351 400 ENSP00000292574/1-499 NMTLGLMRGT ILRCTKYNQE LYTTHGLIKG PLSKVHLETA EKLDRPLVRM ENSBTAP00000027472/1-500 NMTLGLMRGT IHRCTKFNQE MYITRGLIKG PLSKSHLETR EKLDRPLVRM ENSTTRP00000013772/1-497 NMTLGLMRAT IHRCTKFNQE MCVTRGLVKG PLSKSHLETR EKLDRPLVRM bmy_22425T0/1-464 NMTLGLMRGT IHRCTKFNQE MYITRGLVKG PLSESHLETR EKLDRPLVRM BACU004867/1-499 NMTLGLMRGT IHRCTKFNQE MYITRGLVKG PLSERHLETR EKLDRPLVRM 401 450 ENSP00000292574/1-499 YQRHVGTQLP EAARLAQGTD KLQCHITYLE KNLDELLATH KNLSWGLNCK ENSBTAP00000027472/1-500 YQRHVGTQLP EAARLAQGTD KLQRHISHVE KNLDELLSMR KKLTWSFNCK ENSTTRP00000013772/1-497 YQRHVGTQLP EATRLAQGTD KLQRRIAHVE ENLKELLSMR KNVAWSFNCK bmy_22425T0/1-464 YQRHVGTQLP EATRLAQGTD KLQRRISHVE KNLEELLSMR RNLTWSLNCK BACU004867/1-499 YQRHVGTQLP EATRLAQGTD KLQRRISHVE KNLEELLSMR RNLTWSLNCK 451 500 ENSP00000292574/1-499 NIGHEVDGNV VRLRLRQRQP HVCYEQAQRL VKDWDPRTPP PRSKSSA-DP ENSBTAP00000027472/1-500 KIGHNVDYSV VRLRLRQRHP QVCYEQAQRL VNDWDPRTPP RVKSNTAITK ENSTTRP00000013772/1-497 KIGQDVDYNV VRLRLRQRHP HVFYEQAQRL VNDWDPRTPP R--SSVA-RK bmy_22425T0/1-464 KIGQDVDYSV VRLRLRQRHP HVCYEQAQRL VNDRDPRTPP RAQSSIA-RK BACU004867/1-499 KIGQDVDYSV VRLRLRQRHP HVCYEQAQRL VNDRDPHTPP RAQSSIA-RK