KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:46 2014 Check: 00 .. Name: ENSP00000225298/1-556 Len: 565 Check: 5380 Weight: 1.00 Name: ENSBTAP00000027490/1-547 Len: 565 Check: 1615 Weight: 1.00 Name: ENSTTRP00000013149/1-510 Len: 565 Check: 67 Weight: 1.00 Name: BACU006448/1-488 Len: 565 Check: 2701 Weight: 1.00 Name: bmy_20770T0/1-511 Len: 565 Check: 2538 Weight: 1.00 // 1 50 ENSP00000225298/1-556 MPPERRRRMK LDRRTGAKPK RKPGMRPDWK AGAGPGGPPQ KPAPSSQRKP ENSBTAP00000027490/1-547 MPPERRRRVR QDRKTQVRPD R--------R AGAQWGGPPR KAASSCQQKS ENSTTRP00000013149/1-510 MPPERRSRTR PDRRAGARPD RKTRMRPDDR A-AGPDGPLQ KAAPSFQRKS BACU006448/1-488 ---------- ---------- ---------- ---------- ---------- bmy_20770T0/1-511 MPPERRSRAR PDRRAGARPD RKTRMRPDDR AGAGPGGPFR KAAPSSQRKS 51 100 ENSP00000225298/1-556 PARPSAAAAA IAVAAAEEER RLRQRNRLRL EEDKPAVERC LEELVFGDVE ENSBTAP00000027490/1-547 LAWPRAAPAA ISVE-AEEEN RLRLRNRLML EEDKPAAERC LEELVFGDVE ENSTTRP00000013149/1-510 PARPRAAAAV VA---AEEER RLRQRNRQTL EEGKPAVERC LEELVFGDVV BACU006448/1-488 ---------- ---------- -------MTL EEDKPAVERC LEELIFGDVE bmy_20770T0/1-511 PARPRAAATV VA---AEEER RLRQRNRQTL EEDKPAVERC LEELIFGDVE 101 150 ENSP00000225298/1-556 NDEDALLRRL RGPRVQEHED SGDSEVENEA KGNFPPQKKP VWVDEEDEDE ENSBTAP00000027490/1-547 DDEDALLRRL RVPLVQVQED SDDSEVEKEA KDNFLPQKKP VWLDEEDEDE ENSTTRP00000013149/1-510 DDEDALLRRL RGPRVQVQED SGDSEVENEA KDNFPPQKKP VWLDEEDEDE BACU006448/1-488 DDEDALLRRL RGPRVQVQED SGDSEVENEA KDNFPLQKKP VWLDEEDEEE bmy_20770T0/1-511 DDEDALLRRL RGPRVQVQED SGDSEVENEA KDNFPLQKKP VWLDEEDEDE 151 200 ENSP00000225298/1-556 EMVDMMNNRF RKDMMKNASE SKLSKDNLKK RLKEEFQHAM GGVPAWAETT ENSBTAP00000027490/1-547 EMVDMMNNRF RKDMMKNASE NQLSKDELQK RLKEEFQHAM GGVPAWAEAN ENSTTRP00000013149/1-510 EMVDMMNNRF RKDMMKNASE NKLSKDELQK RLKEEFQHAM GGVPAWAETN BACU006448/1-488 EMVDMMNNRF RKDMMKNASE NKLSKDQLQK RLKEEFQHAM GGVPAWAETN bmy_20770T0/1-511 EMVDMMNNRF RKDMMKNASE NKLSKDQLQK RLKEEFQHAM GGVPAWAETS 201 250 ENSP00000225298/1-556 KRKTSSD--- ------DESE EDEDDLLQRT GNFISTSTSL PRGILKMKNC ENSBTAP00000027490/1-547 KWKTPSD--- ------DESE EEEDDLLQRT GNFISTSTSL PKGILKMKNC ENSTTRP00000013149/1-510 KRKTSSD--- ------DESE EDEDDLLQRT GNFISTSTSL PKGILK---- BACU006448/1-488 KRKTSSDDQP MDLFDLDESE EDEDDLLQRT GNFISTSTSL PKGILKMKHC bmy_20770T0/1-511 KRKTSSD--- ------DESE EDEDDLLQRT GNFISTSTSL PKGILK---- 251 300 ENSP00000225298/1-556 QHANAERPTV ARISSVQFHP GAQIVMVAGL DNAVSLFQVD GKTNPKIQSI ENSBTAP00000027490/1-547 QHANAERPTT ARISSVQFHP RAQVVMVAGL DNAVSLFQVD GKTNPKIQSI ENSTTRP00000013149/1-510 ---------- ---------- ---------- --------VD GKTNPKIQSI BACU006448/1-488 QHANAERPTT ARISSVQFHP RAQVVMVAGL DNAVSLFQVD GKTNPKIQSI bmy_20770T0/1-511 ---------- ---------- ---------- --------VD GKTNPKIQSI 301 350 ENSP00000225298/1-556 YLERFPIFKA CFSANGEEVL ATSTHSKVLY VYDMLAGKLI PVHQVRGLKE ENSBTAP00000027490/1-547 YLEKFPIFKA CFSANGEEVL ATSTHSKILY VYDMLAGKLI PVHQVRGLKE ENSTTRP00000013149/1-510 YLEKFPIFKA CFSANGEEVL ATSTHSKVLY VYDMLAGKLI PVHQVRGLKE BACU006448/1-488 YLEKFPIFKA CFSANGEKVL ATSTHSKVLY VYDMLAGKLI PVHQVRGLKE bmy_20770T0/1-511 YLEKFPIFKA CFSANGEKVL ATSTHSKVLY VYDMLAGKLI PVHQVRGLKE 351 400 ENSP00000225298/1-556 KIVRSFEVSP DGSFLLINGI AGYLHLLAMK TKELIGSMKI NGRVAASTFS ENSBTAP00000027490/1-547 KIVRSFEISP DGSFLLINGV AGYLHLLSMK TKELIGSMKI NGRIAASTFS ENSTTRP00000013149/1-510 KIVRSFEVSP DGSFLLINGV AGYFHLLSMK TKELLGSMKI NGRIAASTFS BACU006448/1-488 KIVRSFEVSP DGSFLLINGV AGYFHLLSMK NKELIGSMKI NGRIAASTFS bmy_20770T0/1-511 KIVRSFEVSP DGSFLLINGV AGYSHLLSMK TKELIGSMKI NGRIAASTFS 401 450 ENSP00000225298/1-556 SDSKKVYASS GDGEVYVWDV NSRKCLNRFV DEGSLYGLSI ATSRNGQYVA ENSBTAP00000027490/1-547 SDSKKVYASS GDGEVYVWDV NSRKCLNRFV DEGSLYGLSI ATSRNGQYVA ENSTTRP00000013149/1-510 SDSKKVYASS GDGDVYVWDV NSRKCLNRFV DEGSLYGLSI ATSRNGQYVA BACU006448/1-488 SDSKKVYASS GDGDVYVWDV NSRKCLNRFV DEGSLYGLSI ATSRNGQYVA bmy_20770T0/1-511 SDSKKVYASS GDGDVYVWDV NSRKCLNRFV DEGSLYGLSI ATSRNGQYVA 451 500 ENSP00000225298/1-556 CGSNCGVVNI YNQDSCLQET NPKPIKAIMN LVTGVTSLTF NPTTEILAIA ENSBTAP00000027490/1-547 CGSNCGVVNI YNQDSCLQET NPKPIKAIMN LVTGVTSLTF NPTTEILAIA ENSTTRP00000013149/1-510 CGSNCGVVNI YNQDSCLQEA NPKPIKAIMN LVTGVTSLTF NPTTEILAIA BACU006448/1-488 CGSNCGVVNI YNQDSCLQEA NPKPIKAIMN LVTGVTSLTF NPTTEILAVA bmy_20770T0/1-511 CGSNCGVVNI YNQDSCLXEA NPKPIKAIMN LVTGVTSLTF NPTTEILAIA 501 550 ENSP00000225298/1-556 SEKMKEAVRL VHLPSCTVFS NFPVIKNKNI SHVHTMDFSP RSGYFALGNE ENSBTAP00000027490/1-547 SANMKEAVRL VHLPSFTVFS NFPVVKKKNI SLIHTMDFSP RSGYFALGNE ENSTTRP00000013149/1-510 SEKMKEGVRL VHLPSCTVFS NFPVVKKKNI SLVYTMDFSP RSGYFALGNE BACU006448/1-488 SEKMKEAVRL VHLPSCTVFS NFPVVKKKNI SLVHTMDFSP RSGYFALGNE bmy_20770T0/1-511 SEKMKEAVRL VHLPSCTVFS NFPVVKKKNI SLVHTMDFSP RSGYFALGNE 551 600 ENSP00000225298/1-556 KGKALMYRLH HYSDF ENSBTAP00000027490/1-547 KGKALMYRLH HYSDF ENSTTRP00000013149/1-510 KGKALMYRLH HYSDF BACU006448/1-488 KGKALLYRLH HYSDF bmy_20770T0/1-511 KGKALLYRLH HYSDF