KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:47 2014 Check: 00 .. Name: ENSP00000266087/1-522 Len: 545 Check: 1539 Weight: 1.00 Name: BACU000893/1-391 Len: 545 Check: 2439 Weight: 1.00 Name: ENSBTAP00000027498/1-522 Len: 545 Check: 8316 Weight: 1.00 Name: bmy_06953T0/1-538 Len: 545 Check: 6703 Weight: 1.00 Name: ENSTTRP00000006076/1-513 Len: 545 Check: 9116 Weight: 1.00 // 1 50 ENSP00000266087/1-522 MRLRVRLLKR TWPLEVPETE ---PTLGHLR SHLRQSLLC- ---------- BACU000893/1-391 MKLRVRLQKR TWPLEMAQAE ---PTLGQLR AHLREALLP- ---------- ENSBTAP00000027498/1-522 MKLRVRLQKR TWPLDMPEVE ---PTLGQLR AYLSQA-LP- ---------- bmy_06953T0/1-538 ------MENV GLMVTLESLQ FGGSDIERLR QYYIQS-KPF FLQIKNINTE ENSTTRP00000006076/1-513 --GGRAASGR AAACGVPAPR GHGPASRGLR S------PP- ---------- 51 100 ENSP00000266087/1-522 --------TW GYSSNTRFTI TLNYKDPLTG DEETLASYGI VSGDLICLIL BACU000893/1-391 --------TW GYSSDTRFAI TLNNKDALTG DEETLASYGI VSGDLICLIL ENSBTAP00000027498/1-522 --------TW GYSSDARFAI TLNNKDALTG DEETLASYGI VSGDLLCLIL bmy_06953T0/1-538 NELLLSLSIF LGSSDTRFAI TLNNKDALTG DEETLASYGI VSGDLICLIL ENSTTRP00000006076/1-513 ---------- --GSDTRFAI TLNNEDALTG DEETLASYGI VSGDLICLIL 101 150 ENSP00000266087/1-522 QDDIPAPNIP SSTDSEHSSL QNNEQPSLAT SSNQTSMQDE QPSDSFQGQA BACU000893/1-391 EDAIAAPNLP SSTDSEHSSL QNNDQPSLAA SS-------- ---------- ENSBTAP00000027498/1-522 EDAIAAPNLP SSTVSEHSSV QNNDQPSLAA SSSQSNIQDA QLHDSLQGQA bmy_06953T0/1-538 EDAIAAPNLP SSTDSEHSSL QNNDQPSLAA SSSQSSIQDE QLRDSFQGQA ENSTTRP00000006076/1-513 EDAIAAPNLP SSTDSEHSSL QNNDQPSLAA SSSQSSIQDE QLRDSFQGQA 151 200 ENSP00000266087/1-522 AQSGVWNDDS MLGPSQNFEA ESIQDNAHMA EGTGFYPSEP MLCSESVEGQ BACU000893/1-391 ---------- --GPSQNFEA ESIPDVVDVE EGTGFYPSEP MLCSESVEGQ ENSBTAP00000027498/1-522 AQSEVWNDDS VSGPGQHFEA EAVPDVVDVE EGTGYYLAEP MLCSESVEGQ bmy_06953T0/1-538 AQSDVWNDGS MSGPSQNFEA ESIPDVVDVE EGTGFYPSEP MLCSESVEGQ ENSTTRP00000006076/1-513 AQSDVWNDGS MSGPSHNFEA ESIPDVVDAE EGTGFFPSEP MLCSESVEGQ 201 250 ENSP00000266087/1-522 VPHSLETLYQ SADCSDANDA LIVLIHLLML ESGYIPQGTE AKALSMPEKW BACU000893/1-391 VPHSLETLYQ SADCSNPSDA LIVSIHLLML ESGYIPQGTE AKAVSMPENW ENSBTAP00000027498/1-522 VPHSLEILYQ SADCLNPCDA LIVSIHLLML ESGYIPQGTE AKAVSMPQNW bmy_06953T0/1-538 VPHSLETLYQ SADCSNPSDA LIVSIHLLML ESGYIPQGTE AKAVSMPENW ENSTTRP00000006076/1-513 VPHSLETLYQ SADCSNPSDA LIVSIHLLML E-GYIPQGTE AKAVSMPENW 251 300 ENSP00000266087/1-522 KLSGVYKLQY MHPLCEGSSA TLTCVPLGNL IVVNATLKIN NEIRSVKRLQ BACU000893/1-391 RSGGVYKLQY THPLCEGGSA ALTCVPLGNL IVINATLKIN NEIRSVKRLQ ENSBTAP00000027498/1-522 RLGGVYKLQY THPLCEGGSA ALTCVPLGNL IVINATLKIN SEVRSVKRLQ bmy_06953T0/1-538 RSGGVYKLQY THPLCEGGSA ALTCVPLGNL IVINATLKIN NEIRSVKRLQ ENSTTRP00000006076/1-513 RSGGVYKLQY THPLCEGGSA ALTCVPLGNL IVINXTLKIN SEIRSVKRLQ 301 350 ENSP00000266087/1-522 LLPESFICKE KLGENVANIY KDLQKLSRLF KDQLVYPLLA FTRQALNLPD BACU000893/1-391 LLPESFICKE ESGENVAKIY KDLQKLSRLF KDQLVYPLLA FTRQALNLPD ENSBTAP00000027498/1-522 LLPESFICKE ESGENVAMIY KDLQKLSRLF KDQLVYPLLA FTRQALNLPD bmy_06953T0/1-538 LLPESFICKE ESGENVAKIY KDLQKLSRLF KDQLVYPLLA FTRQALNLPD ENSTTRP00000006076/1-513 LLPESFICKE ESGENVAKIY KDLQKLSRLF KDQLVYPLLA FTRQALNLPD 351 400 ENSP00000266087/1-522 VFGLVVLPLE LKLRIFRLLD VRSVLSLSAV CRDLFTASND PLLWRFLYLR BACU000893/1-391 VFGLVVLPLE LKLRIFRLLD IRSVLSLSAV CRDLYIASND QLLWRCLYLR ENSBTAP00000027498/1-522 VFGLVVLPLE LKLRIFRLLD VRSVLSLSAV CRDLCITSND QLLWRCLYLR bmy_06953T0/1-538 VFGLVVLPLE LKLRIFRLLD VRSVLSLSAV CRDLYIASND QLLWRCLYLR ENSTTRP00000006076/1-513 VFGLVVLPLE LKLRIFRLLD VRSVLSLSAV CRDLCIASND QLLWRCLYLR 401 450 ENSP00000266087/1-522 DFRDNTVRVQ DTDWKELYRK RHIQRKESPK GRFVMLLPSS THTIPFYPNP BACU000893/1-391 DFRG------ ---WLEL--- ------GSAV VRCVVCRLDG T--------- ENSBTAP00000027498/1-522 DFRDGSIRGR DTDWKELYKK RYKQRKEAQR GRHVMFLPSS PHPIPFYPSP bmy_06953T0/1-538 DFRDGTVRGR DTDWKELYKK RHKQRKEAQR GRHVMFLPSS PHPIPFYPNP ENSTTRP00000006076/1-513 DFRDGTVRGR DTDWKELYKK RHKQRKEAQR GRHVMFLPSS PHPIPFYPNP 451 500 ENSP00000266087/1-522 LHPRPF-PSS RLPPGIIGGE YDQRPTLPYV GDPISSLIPG PGETPSQFPP BACU000893/1-391 -------PGS LLD------- -----KLSYC ---------- ---------- ENSBTAP00000027498/1-522 LHPRPFPPSS LLPPGIIGGE YDQRLTLPYV GDPINSLIPG PGETPSQFPP bmy_06953T0/1-538 LHPRPFPPSS LLPPGIIGGE YDERLTLPYV GDPINSLIPG PGETPRQFPP ENSTTRP00000006076/1-513 LHPRPFPPSS LLPPGIIGGE YDERLTLPYV GDPMNSLIPE PGEIPRQFPP 501 550 ENSP00000266087/1-522 LRPRFDPVGP LPGPNPILPG RGGPNDRFPF RPSRGRPTDG RLSFM BACU000893/1-391 ---------- -PGLLAAPPD ---------- ---------- ----- ENSBTAP00000027498/1-522 LRPRFDPVGP LPGPNPILPG RGGPSDRFPL RPSRGWPTDS RLPFM bmy_06953T0/1-538 LRPRFDPIGP LPGPNPILPG RGGPNDRFPL RPSRGRPTDN RLPFM ENSTTRP00000006076/1-513 LRPHFDPVGP FPGPNPILPG RGGPNDRFPL RPSRGWPTDS RLPFM