KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:47 2014 Check: 00 .. Name: ENSP00000351614/1-580 Len: 580 Check: 1580 Weight: 1.00 Name: bmy_06952T0/1-330 Len: 580 Check: 4166 Weight: 1.00 Name: ENSTTRP00000006078/1-580 Len: 580 Check: 9270 Weight: 1.00 Name: ENSBTAP00000027501/1-578 Len: 580 Check: 9434 Weight: 1.00 Name: BACU000891/1-104 Len: 580 Check: 4990 Weight: 1.00 // 1 50 ENSP00000351614/1-580 MNFLRRRLSD SSFMANLPNG YMTDLQRPDS STSSPASPAM ERRHPQPLAA bmy_06952T0/1-330 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006078/1-580 MNFLRRRLSD SSFVANLPNG YMTDLQRPDS STSSPASPAM ERRHPQPLAA ENSBTAP00000027501/1-578 MNFLRRRLSD SSFVANLPNG YMTDLQRPDS STSSPASPAM ERRHPQPLAA BACU000891/1-104 MNFLRRRLSD SSFVANLPNG YMTDLQRPDS STSSPASPAM ERRHPQPLAA 51 100 ENSP00000351614/1-580 SFSSPGSSLF SSLSSAMKQA PQATSGLMEP PGPSTPIVQR PRILLVIDDA bmy_06952T0/1-330 ---------- ---------- -MEAVNLLQ- ---------- ---------- ENSTTRP00000006078/1-580 SFSSPGSSLF SSFSSAMKQT SQAPLGPMES PGPSTPVVQR PRILLVIDDA ENSBTAP00000027501/1-578 SFSSPGSSLF SSFSSAMKQT SQAPSGLMEP PGPSTPVVQR PRILLVIDDA BACU000891/1-104 SFSSPGSSLF SSFSSAMKQT SQAPLGLMEP PGPSTPVVQR PRILLVIDDA 101 150 ENSP00000351614/1-580 HTDWSKYFHG KKVNGEIEIR VEQAEFSELN LAAYVTGGCM VDMQVVRNGT bmy_06952T0/1-330 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006078/1-580 HTDWAKYFHG KKVNGEIEIR VEQAEFSELN LAAYVTGGCM VDMQVVRNGT ENSBTAP00000027501/1-578 HTDWAKYFHG KKVNGEIEIR VEQAEFSELN LAAYVTGGCM VDMQVMRNGT BACU000891/1-104 HTDW------ ---------- ---------- ---------- ---------- 151 200 ENSP00000351614/1-580 KVVSRSFKPD FILVRQHAYS MALGEDYRSL VIGLQYGGLP AVNSLYSVYN bmy_06952T0/1-330 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006078/1-580 KVVSRSFKPD FILVRQHAYS MALGEDYRSL VIGLQYGGLP AVNSLYSVYN ENSBTAP00000027501/1-578 KVV-RSFKPD FILVRQHAYS MALGEDYRSL VIGLQYGGLP AVNSLYSVYN BACU000891/1-104 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000351614/1-580 FCSKPWVFSQ LIKIFHSLGP EKFPLVEQTF FPNHKPMVTA PHFPVVVKLG bmy_06952T0/1-330 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006078/1-580 FCSKPWVFSQ LIKIFHSLGP EKFPLVEQTF FPNHKPMXXX XXXXXXXXXX ENSBTAP00000027501/1-578 FCSKPWVFSQ LIKIFHSLGP EKFPLVEQTF FPNHKPMLTA PHFPVVVKLG BACU000891/1-104 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000351614/1-580 HAHAGMGKIK VENQLDFQDI TSVVAMAKTY ATTEAFIDSK YDIRIQKIGS bmy_06952T0/1-330 --------IK VENQHDYQDI TSMVAMAKTY ATTEAFIDSK YDIRIQKIGS ENSTTRP00000006078/1-580 XXXXXXXXIK VENQHDYQDI TSMVAMAKTY ATTEAFIDSK YDIRIQKIGS ENSBTAP00000027501/1-578 HAHAGMGKIK VENQHDYQDV TSMVAMAKTY ATTEAFIDSK YDIRIQKIGS BACU000891/1-104 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000351614/1-580 NYKAYMRTSI SGNWKANTGS AMLEQVAMTE RYRLWVDSCS EMFGGLDICA bmy_06952T0/1-330 NYKAYMRTSI SGNWKANTGS AMLEQVAMTE RYRLWVDSCS EMFGGLDVCA ENSTTRP00000006078/1-580 NYKAYMRTSI SGNWKANTGS AMLEQVAMTE RYRLWVDSCS EMFGGLDICA ENSBTAP00000027501/1-578 NYKAYMRTSI SGNWKANTGS AMLEQVAMTE RYRLWVDSCS EMFGGLDICA BACU000891/1-104 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000351614/1-580 VKAVHSKDGR DYIIEVMDSS MPLIGEHVEE DRQLMADLVV SKMSQLPMPG bmy_06952T0/1-330 VKAVHSKDGR DYIIEVMDSS MPLIGEHVEE DKQLMADLVV SRMSQLPMPG ENSTTRP00000006078/1-580 VKAVHSKDGR DYIIEVMDSS MPLIGEHLEE DKQLMADLVV SKMSQLPMPG ENSBTAP00000027501/1-578 VKAVHSKDGR DYIIEVMDSS MPLIGEHVEE DKQLMADLVI SKMSQLLMPG BACU000891/1-104 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000351614/1-580 GTAPSPLRPW APQIKSAKSP GQAQLGPQLG QPQPRPPPQG GPRQAQSPQP bmy_06952T0/1-330 GTVPSPLRPW APQTKPAKSP GQAQLGPPLG QPQPRPPTQG GSRQAQSPQP ENSTTRP00000006078/1-580 GTVPSPLRPW TPQTKPAKPP GQAQLGPPLG QPQPRTPTQG GPRQAQSPQP ENSBTAP00000027501/1-578 GTVPSPLRPW APQTKPAKSP GQAQLGPPLG QPQPRPPTQG GPRPAQSPQP BACU000891/1-104 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000351614/1-580 QRSGSPSQQR LSPQGQQPLS PQSGSPQQQR SPGSPQLSRA SSGSSPNQAS bmy_06952T0/1-330 PRSGSPSQQR LSPQGQQPLS PSSGSPQQQR SPGSPQLSRT SGGSSPNQVS ENSTTRP00000006078/1-580 PRSGSPSQQR LSPQGQQPLS PSSGSPQQQR SPGSPQLSRT SGGSSPNQVS ENSBTAP00000027501/1-578 PRSGSPSQQR LSPQGQQPLS PQSGSP-QQR SPGSPQLSRA SGGSSPNQAP BACU000891/1-104 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000351614/1-580 KPGATLASQP RPPVQGRSTS QQGEESKKPA PPHPHLNKSQ SLTNSLSTSD bmy_06952T0/1-330 KPGTTLTSQP RPPLQGRSTS QQGEESKKPA TPHPHLNKSQ SLTNSLSTSD ENSTTRP00000006078/1-580 KPGTTLTSQP RPPMQSRSTS QQGEESKKPA APHPHLNKSQ SLTNSLSTSD ENSBTAP00000027501/1-578 KSSAPLTSQP RPPVQGRSAS QQGEEAKKPA SPHPHLNKSQ SLTNSLSTSD BACU000891/1-104 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000351614/1-580 TSQRGTPSED EAKAETIRNL RKSFASLFSD bmy_06952T0/1-330 ASQRGTPSED EAKAETIRNL RKSFASLFSD ENSTTRP00000006078/1-580 ASQRGTPSED EAKAETIRNL RKSFASLFSD ENSBTAP00000027501/1-578 TSQRGTPSED EAKAETIRNL RKSFASLFSD BACU000891/1-104 ---------- ---------- ----------