KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:48 2014 Check: 00 .. Name: bmy_15679T0/1-456 Len: 706 Check: 947 Weight: 1.00 Name: ENSTTRP00000009470/1-705 Len: 706 Check: 8897 Weight: 1.00 Name: ENSP00000295987/1-705 Len: 706 Check: 3640 Weight: 1.00 Name: ENSBTAP00000027503/1-386 Len: 706 Check: 2482 Weight: 1.00 Name: BACU008461/1-190 Len: 706 Check: 2603 Weight: 1.00 // 1 50 bmy_15679T0/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009470/1-705 MNYLRRRLSD SNFMANLPNG YMTDLQRPQP PPPPPAAPSP GATPGPATST ENSP00000295987/1-705 MNYLRRRLSD SNFMANLPNG YMTDLQRPQP PPPPPGAHSP GATPGPGTAT ENSBTAP00000027503/1-386 ---------- ---------- ---------- ---------- ---------- BACU008461/1-190 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_15679T0/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009470/1-705 AERASSAAPV ASPAAPSPGS SGGGGFFSSL SNAVKQTTAA AAATFSEQVG ENSP00000295987/1-705 AERSSGVAPA ASPAAPSPGS SGGGGFFSSL SNAVKQTTAA AAATFSEQVG ENSBTAP00000027503/1-386 ---------- ---------- ---------- ---------- ---------- BACU008461/1-190 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_15679T0/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009470/1-705 GGSGGAGRGG AAARVLLVID EPHTDWAKYF KGKKIHGEID IKVEQAEFSD ENSP00000295987/1-705 GGSGGAGRGG AASRVLLVID EPHTDWAKYF KGKKIHGEID IKVEQAEFSD ENSBTAP00000027503/1-386 ---------- ---------- ---------- ---------- ---------- BACU008461/1-190 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_15679T0/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009470/1-705 LNLVAHANGG FSVDMEVLRN GVKVVRSLKP DFVLIRQHAF SMARNGDYRS ENSP00000295987/1-705 LNLVAHANGG FSVDMEVLRN GVKVVRSLKP DFVLIRQHAF SMARNGDYRS ENSBTAP00000027503/1-386 ---------- ---------- ---------- ---------- ---------- BACU008461/1-190 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_15679T0/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009470/1-705 LVIGLQYAGI PSVNSLHSVY NFCDKPWVFA QMVRLHKKLG TEEFPLIDQT ENSP00000295987/1-705 LVIGLQYAGI PSVNSLHSVY NFCDKPWVFA QMVRLHKKLG TEEFPLIDQT ENSBTAP00000027503/1-386 ---------- ---------- ---------- ---------- ---------- BACU008461/1-190 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_15679T0/1-456 MGHAHSGMGK APRLPPPPDR ALLPTPLPQV KVDNQHDFQD IASVVALTKT ENSTTRP00000009470/1-705 FYPNHKEMXX XXXXXXXXXX XXXXXXXXXV KVDNQHDFQD IASVVALTKT ENSP00000295987/1-705 FYPNHKEMLS STTYPVVVKM GHAHSGMGKV KVDNQHDFQD IASVVALTKT ENSBTAP00000027503/1-386 --------LS STTYPVVVKM GHAHSGMGKV KVDNQHDFQD IASVVALTKT BACU008461/1-190 -----MRKLS STTYPVVVKM GHAHSGMGKV KVDNQHDFQD IASVVALTKT 301 350 bmy_15679T0/1-456 YATAEPFIDA KYDVRVQKIG QNYKAYMRTS VSGNWKTNTG SAMLEQIAMS ENSTTRP00000009470/1-705 YATAEPFIDA KYDVRVQKIG QNYKAYMRTS VSGNWKTNTG SAMLEQIAMS ENSP00000295987/1-705 YATAEPFIDA KYDVRVQKIG QNYKAYMRTS VSGNWKTNTG SAMLEQIAMS ENSBTAP00000027503/1-386 YATTEPFIDA KYDVRIQKIG QNYKAYMRTS VSGNWKTNTG SAMLEQIAMS BACU008461/1-190 YATAEPFIDA KYDVRIQKIG QNYKAYMRTS VSGNWKTNTG SAMLEQIAMS 351 400 bmy_15679T0/1-456 DRYKLWVDTC SEIFGGLDIC AVEALHGKDG RDHIIEVVGS SMPLIGDHQD ENSTTRP00000009470/1-705 DRYKLWVDTC SEIFGGLDIC AVEALHGKDG RDHIIEVVGS SMPLIGDHQD ENSP00000295987/1-705 DRYKLWVDTC SEIFGGLDIC AVEALHGKDG RDHIIEVVGS SMPLIGDHQD ENSBTAP00000027503/1-386 DRYKLWVDTC SEIFGGLDIC AVEALHGKDG RDHIIEVVGS SMPLIGDHQD BACU008461/1-190 DRYKLWVDTC SEIFGGLDIC AVEALHGKDG RDHIIEVVGS SMPLIGDHQD 401 450 bmy_15679T0/1-456 EDKQLIVELV VNKMAQALPR QRQRDASPGR GSHSQTPSPG ALPLGRQTSQ ENSTTRP00000009470/1-705 EDKQLIVELV VNKMAQVLPR QRQRDASPGR GSHSQTPSPG ALPLGRQTSQ ENSP00000295987/1-705 EDKQLIVELV VNKMAQALPR QRQRDASPGR GSHGQTPSPG ALPLGRQTSQ ENSBTAP00000027503/1-386 EDKQLIVELV VNKMAQALPR QRQRDASPGR GSHSQTPSPG ALPLGRQISQ BACU008461/1-190 EDKQLIVELV VNKMAQALPR QRQRDASPGR GSHSQV---- ---------- 451 500 bmy_15679T0/1-456 QPAGPPAQQR PPPQGGPPQP GPGPQRQGPP LQQRPTPQGQ QHLSGLGPPA ENSTTRP00000009470/1-705 QPAGPPAQQR PPPQGGPPQP GPGPQRQGPP LQQRPTPQGQ QHL-GLGPPA ENSP00000295987/1-705 QPAGPPAQQR PPPQGGPPQP GPGPQRQGPP LQQRPPPQGQ QHLSGLGPPA ENSBTAP00000027503/1-386 QPAGPPAQQR PPPQGGPPQP GPGPQRQGPP LQQRPTPQGQ QHLSGLGPPA BACU008461/1-190 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_15679T0/1-456 GSPLPQRLPS PTSAPQQPAS QATPLPQGQG RQSRPVAGGP GAPPAARPPA ENSTTRP00000009470/1-705 GSPLPQRLPS PTSAPQQPAS QATPLPQGQG RQSRPVAGGP GAPPAARPPA ENSP00000295987/1-705 GSPLPQRLPS PTSAPQQPAS QAAPPTQGQG RQSRPVAGGP GAPPAARPPA ENSBTAP00000027503/1-386 GSPLPQRLPS PTSVPQQPAS QATPMTQGQG RQSRPVAGGP GAPPATRPPA BACU008461/1-190 ---------- ---------- ---------- ---RPLALA- ---------- 551 600 bmy_15679T0/1-456 SPSPQRQAGP PQATRQTSAS GQAPPKASGA PPGGQQRQGP PQKPPGPAGP ENSTTRP00000009470/1-705 SPSPQRQAGP PQATRQTSAS GQAPPKASGA PPGGQQRQGP PQKPPGPAGP ENSP00000295987/1-705 SPSPQRQAGP PQATRQTSVS GPAPPKASGA PPGGQQRQGP PQKPPGPAGP ENSBTAP00000027503/1-386 SPSPQRQAGP PQATRQTSVS GQAPPKASGV PPGGQQRQGP PQKPPGPAGP BACU008461/1-190 ---------- ---------- ---------- -LGG------ ---------- 601 650 bmy_15679T0/1-456 TRQASQVGPM PRTGPPTTQQ PRPSGSGPAG RPTKPQLAQK PSQDVPPPAT ENSTTRP00000009470/1-705 TRQASQAGPM PRTGPPTTQQ PRPSASGPAG RPTKPQLAQK PSQDVPPPAT ENSP00000295987/1-705 TRQASQAGPV PRTGPPTTQQ PRPSGPGPAG RP-KPQLAQK PSQDVPPPAT ENSBTAP00000027503/1-386 TRQASQAGPM PRTGPPTTQQ PRPSGPGPAG RPTKPQLAQK PSQD------ BACU008461/1-190 ---------- ---------- ---------- ---------- ---------- 651 700 bmy_15679T0/1-456 AAAGGPPHPQ LNKSQSLTNA FNLPEPAPPR PSLSQDEVKA ETIRSLRKSF ENSTTRP00000009470/1-705 AAAGGPPHPQ LNKSQSLTNA FNLPEPAPPR PSLSQDEVKA ETIRSLRKSF ENSP00000295987/1-705 AAAGGPPHPQ LNKSQSLTNA FNLPEPAPPR PSLSQDEVKA ETIRSLRKSF ENSBTAP00000027503/1-386 ---------- ---------- ---------- ---------- ---------- BACU008461/1-190 ---------- ---------- ---------- ---------- ---------- 701 750 bmy_15679T0/1-456 ASLFSD ENSTTRP00000009470/1-705 ASLFSD ENSP00000295987/1-705 ASLFSD ENSBTAP00000027503/1-386 ------ BACU008461/1-190 ------