KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:48 2014 Check: 00 .. Name: ENSP00000359864/1-556 Len: 630 Check: 1175 Weight: 1.00 Name: ENSBTAP00000027510/1-505 Len: 630 Check: 7466 Weight: 1.00 Name: bmy_03713T0/1-332 Len: 630 Check: 6409 Weight: 1.00 Name: BACU005441/1-522 Len: 630 Check: 4542 Weight: 1.00 Name: ENSTTRP00000005626/1-502 Len: 630 Check: 5480 Weight: 1.00 // 1 50 ENSP00000359864/1-556 MARFGLPALL CTLAVLSAAL LAAELKSKSC SEVRRLYVSK GFNKNDAPLH ENSBTAP00000027510/1-505 ---------- ---------- ---------- ---------- ---------- bmy_03713T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU005441/1-522 ---------- ---------- ---------- ---------- --MEIDCPTF ENSTTRP00000005626/1-502 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000359864/1-556 EINGDHLKIC PQGSTCCSQE MEEKYSLQSK DDFKSVVSEQ CNHLQAVFAS ENSBTAP00000027510/1-505 -LLGDHLKIC LQGYTCCSQE MEEKYSLQSK EDFKSVVSEQ CNHLQAVFAS bmy_03713T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU005441/1-522 YLPGDHLKIC PQGYTCCSQE MEEKYSLQSK DDFKSVVSEQ CNHLQAVFAS ENSTTRP00000005626/1-502 ----DHLKIC PQGYTCCSQE MEEKYSLQSK DDFKSVVSEQ CNHLQAVFAS 101 150 ENSP00000359864/1-556 RYKKFD---- ----EFFKEL LENAEKSLND MFVKTYGHLY MQNSELFKDL ENSBTAP00000027510/1-505 RYKKFD---- ----EFFKEL LENAEKSLND MFVKTYGHLY MQNSELFKDL bmy_03713T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU005441/1-522 RYKKFDGMYW NFGLKFFKEL LENAEKSLND MFVKTYGHLY MQNSELFKDL ENSTTRP00000005626/1-502 RYKKFD---- ----EFFKEL LENAEKSLND MFVKTYGHLY MQNSELFKDL 151 200 ENSP00000359864/1-556 FVELKRYYVV GNVNLEEMLN DFWARLLERM FRLVNSQYHF TDEYLECVSK ENSBTAP00000027510/1-505 FEELKRYYVA GNVNLEEMLN DFWARLLERM FRLVNSQYHF TDEYLECVSK bmy_03713T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU005441/1-522 FEELKRYYVA GNVNLEEMLN DFWARLLERM FRLVNSQYHF TDDYLECVSK ENSTTRP00000005626/1-502 FEELKRYYVA GNVNLEEMLN DFWARLLERM FRLVNSQYHF TDDYLECVSK 201 250 ENSP00000359864/1-556 YTEQLKPFGD VPRKLKLQVT RAFVAARTFA QGLAVAGDVV SKVSVVNPTA ENSBTAP00000027510/1-505 YTEQLKPFGD VPRKLKLQVT RAFVAARTFA QGLAVARDVV SKVSVVNPTT bmy_03713T0/1-332 ---------- ---------- ---------- ---------- ---------- BACU005441/1-522 YTEQLKPFGD VPRKLKLQVT RAFVAARTFA QGLAVARDVV SKVSVVNPTA ENSTTRP00000005626/1-502 YTEQLKPFGD VPRKLKLQVT RAFVAARTFA QGLAVARDVV SKVSVVNPTA 251 300 ENSP00000359864/1-556 QCTHALLKMI YCSHCRGLVT VKPCYNYCSN IMRGCLANQG DLDFEWNNFI ENSBTAP00000027510/1-505 QCTHALVKMM YCSHCQGLVT VKPCYNYCSN IMRGCLANQG DLDLEWNNFI bmy_03713T0/1-332 ---------- ---------- ---------- ---------- --------ML BACU005441/1-522 QCTHALLKMI YCSHCQGLVT VKPCYNYCSN IMRGCLANQG DLDFEWNNFI ENSTTRP00000005626/1-502 QCTHALLKMI YCSHCQGLVT VKPCYNYCSN IMRGCLANQG DLDFEWNNFI 301 350 ENSP00000359864/1-556 DAMLMVAERL EGPFNIESVM DPIDVKISDA IMNMQDNSVQ VSQK------ ENSBTAP00000027510/1-505 DAMLMVAERL EGPFNIESVM DPIDVKISDA IMNMQENSVQ VSQK------ bmy_03713T0/1-332 DAMLMVAERL EGPFNIESVM DPIDVKISDA IMNMQENSVQ VSQKVRKAGS BACU005441/1-522 DAMLMVAERL EGPFNIESVM DPIDVKISDA IMNMQENSVQ VSQK------ ENSTTRP00000005626/1-502 DAMLMVAERL EGPFNIESVM DPIDVKISDA IMNMQENSVQ VSQK------ 351 400 ENSP00000359864/1-556 ---------- ---------- -----VFQGC GPPKPLPAGR ISRSISESAF ENSBTAP00000027510/1-505 ---------- ---------- -----VFQGC GPPKPLPAGR ISRSISEGTF bmy_03713T0/1-332 WKGEEGARSS LRCHFRHVTT LMPMQVFQGC GPPKPLPAGR ISRSISESAF BACU005441/1-522 ---------- ---------- -----VFQGC GPPKPLPAGR ISRSISESAF ENSTTRP00000005626/1-502 ---------- ---------- -----VFQGC GPPKPLPAGR ISRSISESAF 401 450 ENSP00000359864/1-556 SARFRPHHPE ERPTTAAGTS LDRLVTDVKE KLKQAKKFWS SLPSNVCNDE ENSBTAP00000027510/1-505 SARFRPFHPE ERPTTAAGTS LDRLVTDVKE KLKQAKKFWS SLPSSVCNDE bmy_03713T0/1-332 SARFRPFHPE ERPTTAAGTS LDRLVTDVKE KLKQAKKFWS SLPSNVCNDE BACU005441/1-522 SARFRPFHPE ERPTTAAGTS LDRLVTDVKE KLKQAKKFWS SLPSNVCNDE ENSTTRP00000005626/1-502 SARFRPFHPE ERPTTAAGTS LDRLVTDVKE KLKQAKKFWS SLPSNVCNDE 451 500 ENSP00000359864/1-556 RMAAGNGNED DCWNGKGKSR YLFAVTGNGL ANQGNNPEVQ VDTSKPDILI ENSBTAP00000027510/1-505 RMAAGSGNED DCWNGKGQSR YLFAVTGNGL ANQGNNPEVQ VDTSKPDILI bmy_03713T0/1-332 RMAAGNGNED DCWNGKGKSR YLFAVTGNGL ANQGNNPEVQ VDTSKPDILI BACU005441/1-522 RMAAGNGNED DCWNGKGKSR YLFAVTGNGL ANQGNNPEVQ VDTSKPDILI ENSTTRP00000005626/1-502 RMAAGNGNED DCWNGKGKSR YLFAVTGNGL ANQGNNPEVQ VDTSKPDILI 501 550 ENSP00000359864/1-556 LRQIMALRVM TSKMKNAYNG NDVDFFDISD ESSGEGSGSG CEYQQCPSEF ENSBTAP00000027510/1-505 LRQVMALRVM TSKMKNAYNG NDVDFFDISD ESSGEGSGSG CESQQCPSEF bmy_03713T0/1-332 LRQIMALRVM TSKMKNAYNG NDVDFFDISD ESSGEGSGSG CEYQQCPSEF BACU005441/1-522 LRQIMALRVM TSKMKNAYNG NDVDFFDISD ESSGEGSGSG CEYQQCPSEF ENSTTRP00000005626/1-502 LRQIMALRVM TSKMKNAYNG NDVDFFDISD ESSGEGSGSG CEYQQCPSEF 551 600 ENSP00000359864/1-556 DYNATDHAGK SANEKADSAG VRPGAQAYLL TVFCILFLVM QR-------- ENSBTAP00000027510/1-505 EYNATDHSGK SANDKASSAG VPAAAWPYLL PVFCILSLVM QR-------- bmy_03713T0/1-332 EYNATDHSGK SANDKASSAG VPAGARPYLL TVFCILALFC GKRGLVRKLP BACU005441/1-522 EYNATDHSGK SANDKASSAG VPAGARPYLL TVFCILALVM QR-------- ENSTTRP00000005626/1-502 EYNATDHSGK SVSDKASSAG VPAGARPYLL TVFCILSLVM QG-------- 601 650 ENSP00000359864/1-556 --EWR----- ---------- ---------- ENSBTAP00000027510/1-505 --EWR----- ---------- ---------- bmy_03713T0/1-332 YLERRGAPSD RKGKGLAMHG SQLCATLSAK BACU005441/1-522 --EWR----- ---------- ---------- ENSTTRP00000005626/1-502 --EWR----- ---------- ----------