KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:32:52 2014 Check: 00 .. Name: ENSBTAP00000027525/1-597 Len: 605 Check: 1765 Weight: 1.00 Name: ENSTTRP00000014966/1-550 Len: 605 Check: 359 Weight: 1.00 Name: bmy_14415T0/1-578 Len: 605 Check: 1538 Weight: 1.00 Name: ENSP00000336752/1-594 Len: 605 Check: 1346 Weight: 1.00 Name: BACU008764/1-484 Len: 605 Check: 3410 Weight: 1.00 // 1 50 ENSBTAP00000027525/1-597 MSAGEVERLV SELSGGTGGD EEEEWLYGGP WDVHVHTDLA KDLVDENEVE ENSTTRP00000014966/1-550 MSAGEVERLV SELSGGTGGD EEEEWLYGGP WDVHVHSDLA KDL-DENEVE bmy_14415T0/1-578 MSAGEVERLV SELSGGTGGD EEEEWLYG-- ---------- ----DENEVE ENSP00000336752/1-594 MSAGEVERLV SELSGGTGGD EEEEWLYGGP WDVHVHSDLA KDL-DENEVE BACU008764/1-484 MSAGEVERLV SELSGGTGGD EEEEWLYG-- ---------- ----DENEVE 51 100 ENSBTAP00000027525/1-597 RPEEENASAN PPSGIEDETP ENGVPKPKVT ETEDDSDSDS DDDEDDVHVT ENSTTRP00000014966/1-550 RPEEENASAN PPSGIEDETP ENGVPKPKVT ETEDDSDSDS DDDEDDVHVT bmy_14415T0/1-578 RPEEENASDS LTSCLLK--- -------KVT ETEDDSDSDS DDDEDDVHVT ENSP00000336752/1-594 RPEEENASAN PPSGIEDETA ENGVPKPKVT ETEDDSDSDS DDDEDDVHVT BACU008764/1-484 RPEEENASAN PPSGIEDETP ENGVPKPKVT ETEDDSDSDS DDDEDDVHVT 101 150 ENSBTAP00000027525/1-597 IGDIKTGAPQ YGSYGTAPVN LNIKTGGRVY GTAVGTKVKG VDLDAPGSIN ENSTTRP00000014966/1-550 IGDIKTGAPQ YGSYGTAPVN LNIKTGGRVY GTT-GTKVKG VDLDAPGSIN bmy_14415T0/1-578 IGDIKTGAPQ YGSYGTAPVN LNIKTGGRVY GTT-GTKVKG VDLDAPGSIN ENSP00000336752/1-594 IGDIKTGAPQ YGSYGTAPVN LNIKTGGRVY GTT-GTKVKG VDLDAPGSIN BACU008764/1-484 IGDIKTGAPQ YGSYGTAPVN LNIKTGGRVY GTT-GTKVKG VDLDAPGSIN 151 200 ENSBTAP00000027525/1-597 GVPLLEVDLD SFEDKPWRKP GADLSDYFNY GFNEDTWKAY CEKQKRIRMG ENSTTRP00000014966/1-550 GVPLLEVDLD SFEDKPWRKP GADLSDYFNY GFNEDTWKAY CEKQKRIRMG bmy_14415T0/1-578 GVPLLEVDLD SFEDKPWRKP GADLSDYFNY GFNEDTWKAY CEKQKRIRMG ENSP00000336752/1-594 GVPLLEVDLD SFEDKPWRKP GADLSDYFNY GFNEDTWKAY CEKQKRIRMG BACU008764/1-484 GVPLLEVDLD SFEDKPWRKP GADLSDYFNY GFNEDTWKAY CEKQKRIRMG 201 250 ENSBTAP00000027525/1-597 LEVIPVTSTT NKITAEDCTM EVTPGAEIQD GRFNLFKVQQ GRTGNAEKET ENSTTRP00000014966/1-550 LEVIPVTSTT NKITAEDCTM EVTPGAEIXX XXXXXXXVQQ GRTGNSEKET bmy_14415T0/1-578 LEVIPVTSTT NKITAEDCTM EVTPGAEIQD GRFNLFKVQQ GRTGNSEKET ENSP00000336752/1-594 LEVIPVTSTT NKITAEDCTM EVTPGAEIQD GRFNLFKVQQ GRTGNSEKET BACU008764/1-484 LEVIPVTSTT NKITAEDCTM EVTPGAEIQD GRFNLFK--- ---------- 251 300 ENSBTAP00000027525/1-597 VLPSTKAEFT SPPSLFKTGL PPSRLKTNST FQTSSSSLIQ HSELGKMKSR ENSTTRP00000014966/1-550 ALPSTKAEFT SPPSLFKTGL PPSRNSTSSQ SQTSTASKKA NSSVGKWQDQ bmy_14415T0/1-578 ALPSTKAEFT SPPSLFKTGL PPSRNSTSSQ SQTSTASKKA NSSVGKWQDQ ENSP00000336752/1-594 ALPSTKAEFT SPPSLFKTGL PPSRNSTSSQ SQTSTASRKA NSSVGKWQDR BACU008764/1-484 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000027525/1-597 YTKVESIQLA RIGGNMSQVG KTISILVVQS GFYIDEDYNF QVRNRKHSLH ENSTTRP00000014966/1-550 YGRAESPDLR RLPGAIDVIG QTITISRVEG RRRANENSNI QVLSERSATE bmy_14415T0/1-578 YGRAESPDLR RLPGAIDVIG QTITISRVEG RRRANENSNI QVLSERSATE ENSP00000336752/1-594 YGRAESPDLR RLPGAIDVIG QTITISRVEG RRRANENSNI QVLSERSATE BACU008764/1-484 ---------- ---------- ---------- ---------- -VLSERSATE 351 400 ENSBTAP00000027525/1-597 CSGTLSLPKF LQPPDSPPTH --------PY TSLHLKVHIT YWKSIPITVP ENSTTRP00000014966/1-550 VDNNFSKPPP FFPPGAPPTH LPPPPFLPPP PTVSTAPPLI ---------P bmy_14415T0/1-578 VDNNFSKPPP FFPPGAPPTH LPPPPFLPPP PTVSTAPPLI PPPGIPITVP ENSP00000336752/1-594 VDNNFSKPPP FFPPGAPPTH LPPPPFLPPP PTVSTAPPLI ---------P BACU008764/1-484 VDNNFSKPPP FFPPGAPPTH LPPPPFLPPP PTVSTAPPLI PPPGIPITVP 401 450 ENSBTAP00000027525/1-597 PPGFPPPPGA PPPSLIPTIE SGHSSGYDSR SARAFPYGNV AFPHLPGSTP ENSTTRP00000014966/1-550 PPGFPPPPGA PPPSLIPTIE SGHSSGYDSR SARAFPYGNV AFPHLPGSAP bmy_14415T0/1-578 PPGFPPPPGA PPPSLIPTIE SGHSSGYDSR SARAFPYGNV AFPHLPGSAP ENSP00000336752/1-594 PPGFPPPPGA PPPSLIPTIE SGHSSGYDSR SARAFPYGNV AFPHLPGSAP BACU008764/1-484 PPGFPPPPGA PPPSLIPTIE SGHSSGYDSR SARAFPYGNV AFPHLPGSAP 451 500 ENSBTAP00000027525/1-597 SWPSLVDTSK QWDYYSRREK DRDRDRDRDR ERDRDRDRER ERTRERERER ENSTTRP00000014966/1-550 SWPSLVDTSK QWDYYSRREK DRDRDRDRDR ERDRDRDRER ERTRERERER bmy_14415T0/1-578 SWPSLVDTSK QWDYYSRREK DRDRDRDRDR ERDRDRDRER ERTRERERER ENSP00000336752/1-594 SWPSLVDTSK QWDYYARREK DRDRERDRDR ERDRDRDRER ERTRERERER BACU008764/1-484 SWPSLVDTSK QWDYYSRREK DRDRDRDRDR ERDRDRDRER ERTRERERER 501 550 ENSBTAP00000027525/1-597 DHSPTPSVFN SDEERYRYRE YAERGYERHR ASREKEERHR ERRHREKEET ENSTTRP00000014966/1-550 DHSPTPSVFN SDEERYRYRE YAERGYERHR ASREKEERHR ERRHREKEET bmy_14415T0/1-578 DHSPTPSVFN SDEERYRYRE YAERGYERHR ASREKEERHR ERRHREKEET ENSP00000336752/1-594 DHSPTPSVFN SDEERYRYRE YAERGYERHR ASREKEERHR ERRHREKEET BACU008764/1-484 DHSPTPSVFN SDEERYRYRE YAERGYERHR ASREKEERHR ERRHREKEET 551 600 ENSBTAP00000027525/1-597 RHKSSRSNSR RRHESEEGDS HRRHKHKKSK RSKEGKEAGS EPAPEQESTE ENSTTRP00000014966/1-550 RHKSSRSSNS R--------- ---------- ---------- ---------- bmy_14415T0/1-578 RHKSSRSNSR RRHESEEGDS HRRHKHKKSK RSKEGKEAGS EPAPEQESTE ENSP00000336752/1-594 RHKSSRSNSR RRHESEEGDS HRRHKHKKSK RSKEGKEAGS EPAPEQESTE BACU008764/1-484 RHKSSRSNSR RRHESEEGDS HRRHKHKKSK RSKEGKEAGS EPAPEQESTE 601 650 ENSBTAP00000027525/1-597 ATPAE ENSTTRP00000014966/1-550 ----- bmy_14415T0/1-578 ATPAE ENSP00000336752/1-594 ATPAE BACU008764/1-484 AAPAE