KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:04 2014 Check: 00 .. Name: BACU013252/1-921 Len: 973 Check: 8369 Weight: 1.00 Name: ENSTTRP00000012773/1-741 Len: 973 Check: 202 Weight: 1.00 Name: bmy_20612T0/1-460 Len: 973 Check: 6052 Weight: 1.00 Name: ENSP00000373648/1-872 Len: 973 Check: 7811 Weight: 1.00 Name: ENSBTAP00000027546/1-866 Len: 973 Check: 3687 Weight: 1.00 // 1 50 BACU013252/1-921 MIEEDIVGPP DVGEKKRGIR RTWLPPQSAG KVSSASGRAN MLQLPSARGP ENSTTRP00000012773/1-741 ---------- ---------- ---------- ---------- ---------- bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 ---------- ------MGLK ARRAAGAAGG GGDGGGGGGG AANPAG---- ENSBTAP00000027546/1-866 ---------- ------MGLK ARRPAGAAGG GGDGGGGGGG AANPAG---- 51 100 BACU013252/1-921 ATLLITSFHK AQPSPQINIV TQFTKFDAGP RNWELYVEPV NPSLSGTRYV ENSTTRP00000012773/1-741 ---------- ---------- ---------- ---------- ---------- bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027546/1-866 ---------- ---------- ---------- ---------- ---------- 101 150 BACU013252/1-921 HFNVHWNNWF PDDARAVFLD IGDTGVDIDD DIDIGRDDMD VDIDDIAIDI ENSTTRP00000012773/1-741 ---------- ---------- ---------- ---------- ---------- bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 ---------- ---------- -GDAAAAGDE ERKVGLAPGD VEQVTLALGA ENSBTAP00000027546/1-866 ---------- ---------- -GDAAAAGDE ERKVGLAPGD VEQVTLALGA 151 200 BACU013252/1-921 ADIDVDLDDI DTDIDDMDVD LHDDIDTDKD DMDVDIDDID TDIDDMDVDI ENSTTRP00000012773/1-741 ---------- ---------- ---------- ---------- ---------- bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 G--------- -ADKDGTLLL EGGGRDEGQR RTPQGIGLLA KTPLSRPVKR ENSBTAP00000027546/1-866 G--------- -ADKDGTLLL EGGGRDEGQR RTPQGIGLLA KTPLSRPVKR 201 250 BACU013252/1-921 DDID-TDIDD MDVDIDDIDT DIDDMDVDIV FLIVLGCLIL AVLTTFREYE ENSTTRP00000012773/1-741 ---------- ---------- ---------- FLIVLGCLIL AVLTTFREYE bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 NNAKYRRIQT LIYDALERPR GWALLYHALV FLIVLGCLIL AVLTTFKEYE ENSBTAP00000027546/1-866 NNAKYRRIQT LIYDALERPR GWALLYHALV FLIVLGCLIL AVLTTFREYE 251 300 BACU013252/1-921 TVSGDWLLLL ETFAIFIFGA EFALRIWAAG CCCRYKGWRG RLKFARKPLC ENSTTRP00000012773/1-741 TVSGDWLLLL ETFAIFIFGA EFALRIWAAG CCCRYKGWRG RLKFARKPLC bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 TVSGDWLLLL ETFAIFIFGA EFALRIWAAG CCCRYKGWRG RLKFARKPLC ENSBTAP00000027546/1-866 TVSGDWLLLL ETFAIFIFGA EFALRIWAAG CCCRYKGWRG RLKFARKPLC 301 350 BACU013252/1-921 MLDIFVLIAS VPVVAVGNQG NVLATSLRSL RFLQILRMLR MDRRGGTWKL ENSTTRP00000012773/1-741 MLDIFVLIAS VPVVAVGNQG NVLATSLRSL RFLQILRMLR MDRRGGTWKL bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 MLDIFVLIAS VPVVAVGNQG NVLATSLRSL RFLQILRMLR MDRRGGTWKL ENSBTAP00000027546/1-866 MLDIFVLIAS VPVVAVGNQG NVLATSLRSL RFLQILRMLR MDRRGGTWKL 351 400 BACU013252/1-921 LGSAICAHSK ELITAWYIGF LTLILSSFLV YLVEKDVPEV DAQGQEMKEE ENSTTRP00000012773/1-741 LGSAICAHSK ELITAWYIGF LTLILSSFLV YLVEKDVPEV DAQGEEMKEE bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 LGSAICAHSK ELITAWYIGF LTLILSSFLV YLVEKDVPEV DAQGEEMKEE ENSBTAP00000027546/1-866 LGSAICAHSK ELITAWYIGF LTLILSSFLV YLVEKDVPEV DAQGEEMKEE 401 450 BACU013252/1-921 FETYADALWW GLITLATIGY GDKTPKTWEG RLIAATFSLI GVSFFALPAG ENSTTRP00000012773/1-741 FETYADALWW GLITLATIGY GDKTPKTWEG RLIAATFSLI GVSFFALPAG bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 FETYADALWW GLITLATIGY GDKTPKTWEG RLIAATFSLI GVSFFALPAG ENSBTAP00000027546/1-866 FETYADALWW GLITLATIGY GDKTPKTWEG RLIAATFSLI GVSFFALPAG 451 500 BACU013252/1-921 ILGSGLALKV QEQHRQKHFE KRRKPAAELI Q--------- ---------- ENSTTRP00000012773/1-741 ILGSGLALKV QEQHRQKHFE KRRKPAAELI QAAWRYYATN PNRIDLVATW bmy_20612T0/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000373648/1-872 ILGSGLALKV QEQHRQKHFE KRRKPAAELI QAAWRYYATN PNRIDLVATW ENSBTAP00000027546/1-866 ILGSGLALKV QEQHRQKHFE KRRKPAAELI QAAWRYYATN PNRIDLVATW 501 550 BACU013252/1-921 ---------- -FRIKLLIHL SPAKVKFCDN ---------- ---------- ENSTTRP00000012773/1-741 RFYESVVSFP FFXXXXXXXX XXXKLGLLDR VRLSNPRGSN TKGKLFTPLN bmy_20612T0/1-460 ---------- ---KEQLDAA ASQKLGLLDR VRLSNPRGSN TKGKLFTPLN ENSP00000373648/1-872 RFYESVVSFP FFRKEQLEAA SSQKLGLLDR VRLSNPRGSN TKGKLFTPLN ENSBTAP00000027546/1-866 RFYESVVSFP FFRKEQLDPA ASQKLGLLDR VRLSNPRGSN TKGKLFTPLN 551 600 BACU013252/1-921 -DAIEESPSK EPKPVGSNNK ERFRTAFRMK AYAFWQSSED AGTGDPIAED ENSTTRP00000012773/1-741 VDAIEESPSK EPKPVGSNNK ERFRTAFRMK AYAFWQSSED AGTADPIAED bmy_20612T0/1-460 VDAIEESPSK EPKPVGSNNK ERFRTAFRMK AYAFWQSSED AGTGDPIAED ENSP00000373648/1-872 VDAIEESPSK EPKPVGLNNK ERFRTAFRMK AYAFWQSSED AGTGDPMAED ENSBTAP00000027546/1-866 VDAIEESPSK EPKPVGSNNK ERFRTAFRMK AYAFWQSSED AGTGDPTAED 601 650 BACU013252/1-921 RGYGNDFLIE DMIPTLKAVI RAVRILQFRL YKKKFKETLR PYDVKDVIEQ ENSTTRP00000012773/1-741 RGYGNDFLIE DMIPTLKAAI RAVRILQFRL YKKKFKETLR PYDVKDVIEQ bmy_20612T0/1-460 RGYGNDFLIE DMIPTLKTAI RAVRILQFRL YKKKFKETLR PYDVKDVIEQ ENSP00000373648/1-872 RGYGNDFPIE DMIPTLKAAI RAVRILQFRL YKKKFKETLR PYDVKDVIEQ ENSBTAP00000027546/1-866 RGYGNDFLIE DMIPTLKAAI RAVRILQFRL YKKKFKETLR PYDVKDVIEQ 651 700 BACU013252/1-921 YSAGHLDMLS RIKYLQTRID MIFTPGPPST PKHKKSQKGA AFTYPAQQSP ENSTTRP00000012773/1-741 YSAGHLDMLS RIKYLQTRID MIFTPGPPST PKHKKSQK-- AFTYPSQQSP bmy_20612T0/1-460 YSAGHLDMLS RIKYLQTRID MIFTPGPPST PKHKKSQKGA AFTYPSQQSP ENSP00000373648/1-872 YSAGHLDMLS RIKYLQTRID MIFTPGPPST PKHKKSQKGS AFTFPSQQSP ENSBTAP00000027546/1-866 YSAGHLDMLS RIKYLQTRID MIFTPGPPST PKHKKSQRGA AFTYPSQQSP 701 750 BACU013252/1-921 RNEPYVARPS TSETEDQSMM GKFVKVERQV HDMGKKLDFL VDMHLQHVQR ENSTTRP00000012773/1-741 RNEPYVARPS TSEAEDQSMM GKFVKVERQV RDMGKKLDFL VDMHMQHMER bmy_20612T0/1-460 RNEPYVARPS TSETEDQSMM GKFVKVERQV HDMGKKLDFL VDMHMQHVQR ENSP00000373648/1-872 RNEPYVARPS TSEIEDQSMM GKFVKVERQV QDMGKKLDFL VDMHMQHMER ENSBTAP00000027546/1-866 RNEPYVARPS TSETEDQSMM GKFVKVERQV HDMGKKLDFL VDMHLQHMER 751 800 BACU013252/1-921 LQVHVTDFCP TKGTSSPAEV EKEEDHRDSD LKTIICNYSE TGAPNAPYSF ENSTTRP00000012773/1-741 LQVHVTDFCP TKGTSSPAEA ERREDHREAD LKTIMCNDSE TGAPGAPYSI bmy_20612T0/1-460 LQVHVTDFCP TKGTSSPAEV EKEEDHRDLD LKTIICNYSE TGAPNAPYSF ENSP00000373648/1-872 LQVQVTEYYP TKGTSSPAEA EKKEDNRYSD LKTIICNYSE TGPPEPPYSF ENSBTAP00000027546/1-866 LQVHVAGFSP SKGASSPAEA EQKEDRRDAD LKTIICNYSE TGAPDAPYSF 801 850 BACU013252/1-921 HQVPIDKAGP YGFFAHDPVN LSRGAPSSGK VHATLSSSAT TYAERPTVLP ENSTTRP00000012773/1-741 HQVPIDRAGP YGVFAHDPVN LSRGAPSSGK VHATLSSSAT TYAERPTVLP bmy_20612T0/1-460 HQVPIDKAGP YGFFAHDPVN LSRGAPSSGK VHATLSSSAT TYAERPTVLP ENSP00000373648/1-872 HQVTIDKVSP YGFFAHDPVN LPRGGPSSGK VQATPPSSAT TYVERPTVLP ENSBTAP00000027546/1-866 HQVPVDKVGP YGFFAHDPVN LPLGGPSSGK GHATP----- -YAERPTVLP 851 900 BACU013252/1-921 ILTLLDSRGS YHSQAELHSP CSDRLSPQQR RSITRDSDTP LSLMSVNHEE ENSTTRP00000012773/1-741 ILTLLDSRGS YHSQAELHSP CSDRVSPQQR RSITRDSDTP LSLMSVNHEE bmy_20612T0/1-460 ILTLLDSRGS YHSQAELHSP CSDRLSPQQR RSITRDSDTP LSLMSVNHEE ENSP00000373648/1-872 ILTLLDSRVS CHSQADLQGP YSDRISPRQR RSITRDSDTP LSLMSVNHEE ENSBTAP00000027546/1-866 ILTLLDSRGS YRSQVELHGP CSDRVSPRQR RSITRDSDTP LSLMSVNHEE 901 950 BACU013252/1-921 LERSPSGFSI SQDRDDYVFG PSGGSSWMRE KRYLAEGETD TDTDPFTPSG ENSTTRP00000012773/1-741 LERSPSGFSI SQDRDDFVFG PSGGSSWMRE KRYLAEGETD TDTDPFTPSG bmy_20612T0/1-460 LERSPSGFSI SQDRDDYVFG PSGGSSWMRE KRYLAEGETD TDTDPFTPSG ENSP00000373648/1-872 LERSPSGFSI SQDRDDYVFG PNGGSSWMRE KRYLAEGETD TDTDPFTPSG ENSBTAP00000027546/1-866 LERSPSGFSI SQDRDDYAFG PSGGSSWMRE KRYLAEGETD TDTEPFTPSG 951 1000 BACU013252/1-921 SMPLSSTGDG ISDSIWTPSN KPT ENSTTRP00000012773/1-741 SMPLSSTGDG ISDSIWTPSN KPT bmy_20612T0/1-460 SMPLSSTGDG ISDSIWTPSN KPT ENSP00000373648/1-872 SMPLSSTGDG ISDSVWTPSN KPI ENSBTAP00000027546/1-866 SLPLSSTGDG ISDSIWTPSG KPT