KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:05 2014 Check: 00 .. Name: ENSP00000410481/1-244 Len: 430 Check: 7944 Weight: 1.00 Name: ENSBTAP00000027554/1-246 Len: 430 Check: 47 Weight: 1.00 Name: BACU015901/1-360 Len: 430 Check: 5194 Weight: 1.00 Name: bmy_03155T0/1-235 Len: 430 Check: 9813 Weight: 1.00 Name: ENSTTRP00000013356/1-193 Len: 430 Check: 3019 Weight: 1.00 // 1 50 ENSP00000410481/1-244 MGALGLEGRG GRLQGRGSLL LAVAGATSLV TLLLAVPITV LAVLALVPQD ENSBTAP00000027554/1-246 MGERGLEGRG RRPQRKGWLL LAVAGVSSLV TLLLAVPITV VAVLALVPQE BACU015901/1-360 ---------- ---------- --------MA RMLLLIFITV H--------- bmy_03155T0/1-235 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013356/1-193 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000410481/1-244 QGGLVTETAD PGA------- ---------- ---------- ---------- ENSBTAP00000027554/1-246 QGGLVTGTAD PGT------- ---------- ---------- ---------- BACU015901/1-360 ---------- PGSCALWVSQ PPEIRTQEGT PAFLPCSFNA SQGKLAIGSV bmy_03155T0/1-235 ----VTGTAD PGA------- ---------- ---------- ---------- ENSTTRP00000013356/1-193 ----VTGTAD PGA------- ---------- ---------- ---------- 101 150 ENSP00000410481/1-244 ---------- ---------- ---------- ------QAQQ G--------- ENSBTAP00000027554/1-246 ---------- ---------- ---------- ------QAPA H--------- BACU015901/1-360 TWYQDKVAPG KEVRNETSEF RGRLAPLPSS RFLCDHQAEL HIWDTRARDA bmy_03155T0/1-235 ---------- ---------- ---------- ------QAQA H--------- ENSTTRP00000013356/1-193 ---------- ---------- ---------- ------QAQA H--------- 151 200 ENSP00000410481/1-244 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027554/1-246 ---------- ---------- ---------- ---------- ---------- BACU015901/1-360 GIYVCRVEVL GLGVGTGNGT LLVVEKGPPQ LAAGTVFLLR AGFYAFSFLS bmy_03155T0/1-235 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013356/1-193 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000410481/1-244 ---------L GF-------- ---------- ---QKLP-EE EPETDLSPGL ENSBTAP00000027554/1-246 ---------Q RF-------- ---------- -ESGELP-EE DSETDLSPRL BACU015901/1-360 VAMGSTIYYQ GKCDYTWVAA LPPTVDSSPL TESGELPVEE EAETDLSPRL bmy_03155T0/1-235 ---------Q RFGDYTWVAA LPPTVDSSPL PESGELPVEE EAETDLSPRL ENSTTRP00000013356/1-193 ---------Q RF-------- ---------- -ESRELPVEE EAETDLSPRL 251 300 ENSP00000410481/1-244 PAAHLI---- ---------- ---------G APLKGQGLGW ETTKEQAFLT ENSBTAP00000027554/1-246 PAAHLI---- ---------- ---------G AWTTGQGLGW EAKKEEAFLS BACU015901/1-360 PAAHLI---- ---------- ---------G AWTRGQGLGW EAKKEEAFLR bmy_03155T0/1-235 PAAHLIEVPG LDHSFQDRIS ESQPARFSAG AWTRGQGLGW EAKKEEAFLR ENSTTRP00000013356/1-193 PAAHLI---- ---------- ---------G AWTTGQGLGW EAKKEEAFLR 301 350 ENSP00000410481/1-244 SGTQFSDAEG LALPQDGLYY LYCLVGYRGR APPGGGDPQG RSVTLRSSLY ENSBTAP00000027554/1-246 SGTQFSGAEG LALPQDGLYY LYCHIGYRGR APPPAVEPLD GSVTLLSRLY BACU015901/1-360 SGTQFSGAEG LALPQDGLYY LYCHVGYRGR APPPGGDPLD RSVTLLSRLY bmy_03155T0/1-235 SGTQFSGAEG LALPQDGLYY LYCHVGYRGR APPPGGDPLD RSVTLLSRLY ENSTTRP00000013356/1-193 SGTQFSGAEG LALPQDGLYY LYCHVGYRGR APPPGGDPLD RSVTLLSRLY 351 400 ENSP00000410481/1-244 RAGGAYGPGT PELLLEGAET VTPVLDPARR QGYGPLWYTS VGFGGLVQLR ENSBTAP00000027554/1-246 RAGGAYGSGT PELLLEGAET VTPVSDPARR HDYGPLWYTS VGFGGLVQLR BACU015901/1-360 RAGGAYGSGS PELLLEGAET VTPVLDPARR HEYGPLWYTS VGFGGLVQLR bmy_03155T0/1-235 RAGGAYGSGS PELLLEGAET VTPVLDPARR HEYGPLWYTS VGFGGLVQLR ENSTTRP00000013356/1-193 RAGGAYGSGS PELLLEGAET VSPVLDPAQR HEYGPLWYTS VGFGGLVQLR 401 450 ENSP00000410481/1-244 RGERVYVNIS HPDMVDFARG KTFFGAVMVG ENSBTAP00000027554/1-246 RGERVYVNIS HPDMVDYRRG KTFFGAVMVG BACU015901/1-360 RGERVYVNIS HPDMVDYRRG KTFFGAVMVG bmy_03155T0/1-235 RGERVYVNIS HPDMVDYRRG KTFFGAVMVG ENSTTRP00000013356/1-193 RGERVYVNIS HPDMVDYRRG KTFFGAVMVG