KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:06 2014 Check: 00 .. Name: ENSP00000365777/1-656 Len: 822 Check: 1735 Weight: 1.00 Name: ENSBTAP00000027586/1-655 Len: 822 Check: 7996 Weight: 1.00 Name: ENSTTRP00000010873/1-696 Len: 822 Check: 3268 Weight: 1.00 Name: bmy_12774T0/1-780 Len: 822 Check: 5872 Weight: 1.00 Name: BACU019827/1-696 Len: 822 Check: 3531 Weight: 1.00 // 1 50 ENSP00000365777/1-656 ---------- ---------- ---------- ---------- -MVNEARGNS ENSBTAP00000027586/1-655 ---------- ---------- ---------- ---------- -MVNEPRGNG ENSTTRP00000010873/1-696 MDRPKPKVLP AGHCCPSLGM RAWEAGSARF SVTPSISRSS AMVNEPRGHG bmy_12774T0/1-780 ---------- ---------- ---------- ---------- -MVNEPRGHG BACU019827/1-696 MDGPKPKVLP AGHCCPSLGM RAWEAGSARL SVPPSISRSS AMVNEPRGHG 51 100 ENSP00000365777/1-656 SLNPCLEGSA SSGSESSKDS SRCSTPGLDP ERHERLREKM RRRLESGDKW ENSBTAP00000027586/1-655 SPGPRWEGS- SSGSESSKDS SRCSTPGLDP ERCERLREKM KRRMDSGDKW ENSTTRP00000010873/1-696 GPSPRWEGS- SSGSESSKDS SRCSTPVLDP ERHERLREKM KRRMESGDKW bmy_12774T0/1-780 GPSPRWEGS- SSGSESSKDS SRCSTPVLDP ERHERLRERM KRRMESGDKW BACU019827/1-696 GPSPRWEGS- SSGSESSKDS SRCSTPVLDP ERHERLREKM KRRMESGDKW 101 150 ENSP00000365777/1-656 FSLEFFPPRT AEGAVNLISR FDRMAAGGPL YIDVTWHPAG DPGSDKETSS ENSBTAP00000027586/1-655 FSLEFFPPRT AQGAVNLISR FDRMGAGGPL FVDVTWHPAG DPGSDKETSS ENSTTRP00000010873/1-696 FSLEFFPPRT AEGAVNLISR FDRMGAGGPL FIDVTWHPAG DPGSDKETSS bmy_12774T0/1-780 FSLEFFPPRT AEGAVNLISR FDRMGAGGPL FIDVTWHPAG DPGSDKETSS BACU019827/1-696 FSLEFFPPRT AEGAVNLISR FDRMGAGGPL FIDVTWHPAG DPGSDKETSS 151 200 ENSP00000365777/1-656 MMIASTAVNY CGLETILHMT CCRQRLEEIT GHLHKAKQLG LKNIMALRGD ENSBTAP00000027586/1-655 MVIASTAVNY CGLETILHMT CCHQSREEIT GHLNKAKQLG LKNILALRGD ENSTTRP00000010873/1-696 MVIASTAVNY CGLETILHMT CCHQSREEIT GHLHKAKRLG LKNILALRGD bmy_12774T0/1-780 MVIASTAVNY CGLETILHMT CCHQSREEIT GHLHKAKRLG LKNILALRGD BACU019827/1-696 MVIASTAVNY CGLETILHMT CCHQSREEIT GHLHKAKRLG LKNILALRGD 201 250 ENSP00000365777/1-656 PIGDQWEEEE GGFNYAVDLV KHIRSEFGDY FDICVAGYPK GHPEAGSFEA ENSBTAP00000027586/1-655 PIGDQWEEEE GGFNYATDLV KHIRNEFGDY FDVCVAGYPK GHPEGESFEA ENSTTRP00000010873/1-696 PIGDQWEEED GGFNYAVDLV KHIRSEFGDY FDVCVAGYPK GHPDAESFEA bmy_12774T0/1-780 PIGDQWEEEE GGFNYAVDLV KHIRSEFGDY FDVCVAGYPK GHPDSESFEA BACU019827/1-696 PVGDQWEEEE GGFSYAVDLV KHIRSEFGDY FDVCVAGYPK GHPDSESFEA 251 300 ENSP00000365777/1-656 DLKHLKEKVS AGADFIITQL FFEADTFFRF VKACTDMGIT CPIVPGIFPI ENSBTAP00000027586/1-655 DLKHLKEKVA AGADFIITQL FFEAETFFRF VKACSEIGIT CPILPGIFPI ENSTTRP00000010873/1-696 GLKHLKEKVA AGADFIITQL FFEADTFFRF VKACSEIGIT CPILPGIFPI bmy_12774T0/1-780 DLKHLKEKVA AGADFIITQL FFEANTFFRF VKACSEIGIT CPILPGIFPI BACU019827/1-696 DLKHLKEKVA AGADFIITQL FFEADTFFRF VKACSEIGIT CPILPGIFPI 301 350 ENSP00000365777/1-656 QGYHSLRQLV KLSKLEVPQE IKDVIEPIKD NDAAIRNYGI ELAVSLCQEL ENSBTAP00000027586/1-655 QGYHSLRQLV KLSKLEVPQQ IKDVIEPIKD NDAAIRNYGI EQAVSLCQEL ENSTTRP00000010873/1-696 QGYHSLRQLV KLSKLEVPQQ IKDVIEPIKD NDDAIRNYGI EQALSLCREL bmy_12774T0/1-780 QGYHSLRQLV KLSKLEVPQQ IKDVIEPIKD NDAAIRNYGI EQALSLCQEL BACU019827/1-696 QGYHSLRQLV KLSKLEVPQQ IKDVIEPIKD NDAAIRNYGI EQALSLCQEL 351 400 ENSP00000365777/1-656 LASGLVPGLH FYTLNREMAT TEVLKRLGMW TEDPRRPLPW ALSAHPKRRE ENSBTAP00000027586/1-655 LASGLVPGLH FYTLNREVAT IEVLKRLGLW IEDPRRPLPW ALSAHPKRRV ENSTTRP00000010873/1-696 LASGSVPGLH FYTLNREVAT TEVLKRLGMW IEDPRRPLPW AISAHPKRRE bmy_12774T0/1-780 LASGLVPGLH FYTLNREMAT TEVLKRLGMW IEDPRRPLPW AISAHPKRRE BACU019827/1-696 LASGLVPGLH FYTLNREMAT TEVLKRLGMW IEDPRRPLPW AISAHPKRRE 401 450 ENSP00000365777/1-656 EDVRPIFWAS RPKSYIYRTQ EWDEFPNGRW GNSSSPAFGE LKDYYLFYLK ENSBTAP00000027586/1-655 EDVRPIFWAS RPKSYIYRTQ EWDEFPNGRW GNSSSPAFGE LKDYYLFYLK ENSTTRP00000010873/1-696 EDVRPIFWAS RPKSYIYRTQ EWDEFPNGRW GNSSSPAFGE LKDYYLFYLK bmy_12774T0/1-780 EDVRPIFWAS RPKSYIYRTQ EWDEFPNGRW GNSSSPAFGE LKDYYLFYLK BACU019827/1-696 EDVRPIFWAS RPKSYIYRTQ EWDEFPNGRW GNSSSPAFGE LKDYYLFYLK 451 500 ENSP00000365777/1-656 SKSPKEELLK MWGEELTSEE SVFEVFVLYL SGEPNRNGHK VTCLPWNDEP ENSBTAP00000027586/1-655 SKSPKEELLK MWGEELTSEE SVFQVFAHYL SGEPNQNGYK VTCLPWNDEP ENSTTRP00000010873/1-696 SKSPKEELLK MWGEELTSEE SVFEVFVHYL SGEPNQNGYK VTCLPWNDEP bmy_12774T0/1-780 SKSPKEELLK MWGEELTSEE SVFEVFAHYL SGEPNQNGYK VTCLPWNDEP BACU019827/1-696 SKSPKEELLK MWGEELTSEE SVFEVFAHYL SGEPNQNGYK VTCLPWNDEP 501 550 ENSP00000365777/1-656 LAAETSLLKE ELLRVNRQGI LTINSQPNIN GKPSSDPIVG WGPSGGYVFQ ENSBTAP00000027586/1-655 LAAETSLMKE ELLRVNRRGI LTINSQPNIN GKPSSDPIVG WGPSGGYVFQ ENSTTRP00000010873/1-696 LAAETSLMKE ELLRVNRRGI LTINSQPNIN GKPSSDPIVG WGPGGGYVFQ bmy_12774T0/1-780 LAAETSLMKE ELLRVNRQGI LTINSQPSIN GKPSSDPIVG WGPGGGYVFQ BACU019827/1-696 LAAETSLMKE ELLRVNRRGI LTINSQPSIN GKPSSDPVVG WGPGGGYVFQ 551 600 ENSP00000365777/1-656 K--------- ---------- ---------- ---------- ---------- ENSBTAP00000027586/1-655 K--------- ---------- ---------- ---------- ---------- ENSTTRP00000010873/1-696 K--------- ---------- ---------- ---------- ---------- bmy_12774T0/1-780 KVVLEKPSTQ QIGGWGVSGF SCLTCQTGPP VQLLERLLHG TFPNWTKGWQ BACU019827/1-696 K--------- ---------- ---------- ---------- ---------- 601 650 ENSP00000365777/1-656 ---------- --AYLEFFTS RETAEALLQV LKKYELRVNY HLVNVK---- ENSBTAP00000027586/1-655 ---------- --AYLEFFTS RETVEALLQV LKKYELRVNY HIVDVK---- ENSTTRP00000010873/1-696 ---------- --AYLEFFTS RETVEALLQV LKKYELRVNY HIVDVK---- bmy_12774T0/1-780 TSLRPVQTEK PHAYLEFFTS RETVEALLQV LKKYELRVNY HIVDVKVGRP BACU019827/1-696 ---------- --AYLEFFTS RETVEALLQV LKKYELRVNY HIVDVK---- 651 700 ENSP00000365777/1-656 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027586/1-655 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010873/1-696 ---------- ---------- ---------- ---------- ---------- bmy_12774T0/1-780 RVKGRSAGPG LVARHRAAEP GQGWGRDSGR RGRAHPWGEG WSCLHPKSAP BACU019827/1-696 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000365777/1-656 ---------- GENITNAPEL QPNAVTWGIF PGREIIQPTV VDPVSFMFWK ENSBTAP00000027586/1-655 ---------- GENITNAPEL QPNAVTWGIF PGREIIQPTV VDPVSFMFWK ENSTTRP00000010873/1-696 ---------- GDNITNAPEL QPNAVTWGIF PGREIIQPTV VDPVSFMFWK bmy_12774T0/1-780 THRAPSSPPQ GDNITNAPEL QPNAVTWGIF PGREIIQPTV VDPVSFMFWK BACU019827/1-696 ---------- GDNITNAPEL QPNAVTWGIF PGREIIQPTV VDPVSFMFWK 751 800 ENSP00000365777/1-656 DEAFALWIER WGKLYEEESP SRTIIQYIHD NYFLVNLVDN DFPLDNCLWQ ENSBTAP00000027586/1-655 DEAFALWIEQ WGKLYEEESP SRMIIQYIHD NYFLVNLVDN EFPLDNCLWQ ENSTTRP00000010873/1-696 DEAFALWVEQ WGKLYEEGSP SRTIIQHIHD NYFLVNLVDN EFPLDSCLWQ bmy_12774T0/1-780 DEAFALWIEQ WGKLYEEESP SRMIIQYIHD NYFLVNLVDN EFPLDSCLWQ BACU019827/1-696 DEAFALWIEQ WGKLYEEESP SRMIIQYIHD NYFLVNLVDN EFPLDSCLWQ 801 850 ENSP00000365777/1-656 VVEDTLELLN RPTQNARETE AP ENSBTAP00000027586/1-655 VVEDTFELLS RPPQDKRETE AL ENSTTRP00000010873/1-696 VVEDTFELLS GPPQSKRETE AP bmy_12774T0/1-780 VVEDTFELLS RPPQNKSETE AP BACU019827/1-696 VVEDTFELLN RPPQNKSETE AP