KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:12 2014 Check: 00 .. Name: BACU008880/1-213 Len: 257 Check: 2534 Weight: 1.00 Name: ENSP00000257836/1-226 Len: 257 Check: 9643 Weight: 1.00 Name: ENSBTAP00000027625/1-228 Len: 257 Check: 8557 Weight: 1.00 Name: bmy_16595T0/1-256 Len: 257 Check: 3671 Weight: 1.00 Name: ENSTTRP00000001983/1-227 Len: 257 Check: 7201 Weight: 1.00 // 1 50 BACU008880/1-213 MGDSKGATSA DRVRFHRKAE GGRGDSCQTM FTLLLLLSQL RIVTFAFPHG ENSP00000257836/1-226 ---------- ---------- ---------M FTLLVLLSQL PTVTLGFPHC ENSBTAP00000027625/1-228 ---------- ---------- ---------M FPLLVLLSQL PVVTFAFPHC bmy_16595T0/1-256 MGDSKGTTSA DRVRFHRKAE GGRGDSCQTM FTLLVLLSQL RIVTFAFPHG ENSTTRP00000001983/1-227 ---------- ---------- ---------M FTLLVLLSQL RILTFASPHR 51 100 BACU008880/1-213 TGGP-EESRH AGEEVFTSKE EANLFIRRHL LYNRFDLELF TPSDLERECR ENSP00000257836/1-226 ARGP-KASKH AGEEVFTSKE EANFFIHRRL LYNRFDLELF TPGNLERECN ENSBTAP00000027625/1-228 TRSPSEESRH AREEVFTSKE EANLFIHRHL LYNRFDLELF TPGDLERECI bmy_16595T0/1-256 TRGP-EESRH AGEEVFTSKE EANLFIRRHL LYNRFDLELF TPSDLERECR ENSTTRP00000001983/1-227 TRSP-EESRH KGEEVFTSKE EANLFIRRHL LYNRFDLELF TSSDLERECR 101 150 BACU008880/1-213 EELCNYEEAR EIFVDEDKTM TFWQEYSIKG PTTKSDANRE KIDVMGLLTG ENSP00000257836/1-226 EELCNYEEAR EIFVDEDKTI AFWQEYSAKG PTTKSDGNRE KIDVMGLLTG ENSBTAP00000027625/1-228 EELCNYEEAR EIFVDEDKTM KFWQEYSVRG PTTKSDANRE KIDVMGLLTG bmy_16595T0/1-256 EELCNYEEAR EIFVDEDKTM TFWQEYSIKG PTTKSDDNRE KIDVMGLLTG ENSTTRP00000001983/1-227 EELCNYEEAR EIFVDEDKTM AFWQEYSIKG PTTESDANRE KIDVMGLLTG 151 200 BACU008880/1-213 LIAAGVFLVI FGLLGYYLCI TKCNRQRHPG LKYSV----- ---------- ENSP00000257836/1-226 LIAAGVFLVI FGLLGYYLCI TKCNRLQHPC SSAVY-ERGR HTPSIIFRRP ENSBTAP00000027625/1-228 LIAAGVFLVI LGLVGYYLCI TKCHRQQYPG SSDICVRRGR HTPSIIFRRP bmy_16595T0/1-256 LIAAGVFLVI FGLLGYYLCI TKCNRQRHPG SSATYARRGR HTPSIIFRRP ENSTTRP00000001983/1-227 LIAAGIFLVI FGLLGYYLCI TKCNRQRHPG SSATYARRGR HTPSIVFRRP 201 250 BACU008880/1-213 --NLFTPID- ---------- ------SQES NCKSS----- ----FRACDN ENSP00000257836/1-226 EEAALSPLPP SVEDAGLPSY EQAVALTRKH SVSPPPPYPG HTKGFRVFKK ENSBTAP00000027625/1-228 EEAVLSPSPP SLEDTGLPSY EQAVALTRKQ SVSPPPPYPG PANDFRVFKK bmy_16595T0/1-256 EEAVLSPLPP SVEDTGLPSY EQAMALTRKH NVSPPPPYPG PAKGFRVFKK ENSTTRP00000001983/1-227 EEAVLPPLPP SVEDTGLPSY EQAMALTRKQ NVSPPPPYPG PAKGFRVFKK 251 300 BACU008880/1-213 PVTPAVA ENSP00000257836/1-226 SMSLPSH ENSBTAP00000027625/1-228 SMSLPSH bmy_16595T0/1-256 SMSLPSH ENSTTRP00000001983/1-227 SMSLPSR