KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:12 2014 Check: 00 .. Name: ENSP00000361359/1-277 Len: 296 Check: 639 Weight: 1.00 Name: ENSBTAP00000027630/1-280 Len: 296 Check: 3978 Weight: 1.00 Name: ENSTTRP00000000458/1-280 Len: 296 Check: 3848 Weight: 1.00 Name: bmy_06248T0/1-296 Len: 296 Check: 8818 Weight: 1.00 Name: BACU011369/1-191 Len: 296 Check: 7385 Weight: 1.00 // 1 50 ENSP00000361359/1-277 ------MVRL PLQCV----L W-----GCLL TAVHPEPPTA CREKQYLINS ENSBTAP00000027630/1-280 ------MVRL PLQCL----F W-----GFFL TAVHSEPATA CGEKQYPVNS ENSTTRP00000000458/1-280 ------MVRL PLQCL----L W-----GCFL TAVHAEPPTS CRENQYQTNS bmy_06248T0/1-296 MGWDSGSGRD PVLALSPPAA WFSPRHGSSA SAVSPLGLLF DRRPPRTTHF BACU011369/1-191 ------MSQE ---------- ---------- ---------- ---------- 51 100 ENSP00000361359/1-277 QCCSLCQPGQ -KLVSDCTEF TETECLPCGE SEFLDTWNRE THCHQHKYCD ENSBTAP00000027630/1-280 LCCDLCPPGQ -KLVNDCTEV SKTECQSCGK GEFLSTWNRE KYCHEHRYCN ENSTTRP00000000458/1-280 RCCNLCPPGQ -KLKNDCTEV TETECLPCSK GEFLATRNSE KYCHQHRYCN bmy_06248T0/1-296 MRRKPIPNKQ SKLMNDCTEV TDTECLPCSK GEFLATYSRE KYCHQHKYCN BACU011369/1-191 ------RAGQ -KLVNDCTEV TETECLPCSK GEFLATYSRE KYCHQHKYCN 101 150 ENSP00000361359/1-277 PNLGLRVQQK GTSETDTICT CEEGWHCTSE ACESCVLHRS CSPGFGVKQI ENSBTAP00000027630/1-280 PNLGLRIQSE GTLNTDTTCV CVEGQHCTSH TCESCTPHSL CLPGFGVKQI ENSTTRP00000000458/1-280 PNLGLQIQTE GTSITDTICT CDEGHHCTSH TCESCTPHSL CLPGFGVKQM bmy_06248T0/1-296 PNLGLQIQRE GTTETDTICI CDEGQHCTSH TCESCTPHSL CLPGFGVKQI BACU011369/1-191 PNLGLQIQRE GTTETDTTCI CDEGQHCTSH TCESCTPHSL CLPGFGVKQI 151 200 ENSP00000361359/1-277 ATGVSDTICE PCPVGFFSNV SSAFEKCHPW TSCETKDLVV QQAGTNKTDV ENSBTAP00000027630/1-280 ATGLLDTVCE PCPLGFFSNV SSAFEKCHRW TSCERKGLVE QHVGTNKTDV ENSTTRP00000000458/1-280 ATGVSDTICE RCPVGFFSSV SSAFEKCHPW TSCESKGLVE QHAGTNKTDV bmy_06248T0/1-296 ATGVSDTICE PCSVGFFSNV SSAFEKCHPW TSCESKGLVE QHAGTNKTDV BACU011369/1-191 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000361359/1-277 VCGPQDRLRA LVVIPIIFGI LFAILLVLVF IKKVAKKPTN KAPHP---KQ ENSBTAP00000027630/1-280 VCGFQSRMRT LVVIPVTMGV LFAVLLVSAC IRNITKKRQA KALHPMAERQ ENSTTRP00000000458/1-280 VCGFQNRMRA LVVIPITMVI LFTVLLVSAC IRKMVKKQET KALHPKAERQ bmy_06248T0/1-296 VCGFQNRTRA LVVIPITMAI LFTVLLVSTC IRKMAKKQET KALHPKAERQ BACU011369/1-191 --GFQNRTRA LVVIPITMVI LFTVLLVSTC IGKMIKKQET KVLHPKAERQ 251 300 ENSP00000361359/1-277 EPQEINFPDD LPGSNTAAPV QETLHGCQPV TQEDGKESRI SVQERQ ENSBTAP00000027630/1-280 DPVETIDPED FPGPHPPPPV QETLCWCQPV AQEDGKESRI SVQERE ENSTTRP00000000458/1-280 DPVETIDPED FLGPHSTPPV QETLHWCQPV AQEDGKESRI SVQERE bmy_06248T0/1-296 DPVETIDPED FLGPHSTPPV QETLHWCQPV AQEDGKESRI SVQERE BACU011369/1-191 DPVETIDPED FLGPHSTPPV QETLHWCQPV AQEDGKESRI SVQERE