KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:22 2014 Check: 00 .. Name: ENSTTRP00000005566/1-445 Len: 471 Check: 3009 Weight: 1.00 Name: ENSP00000293894/1-446 Len: 471 Check: 9469 Weight: 1.00 Name: BACU009239/1-383 Len: 471 Check: 5680 Weight: 1.00 Name: bmy_01900T0/1-378 Len: 471 Check: 6050 Weight: 1.00 Name: ENSBTAP00000027633/1-468 Len: 471 Check: 229 Weight: 1.00 // 1 50 ENSTTRP00000005566/1-445 ------MLDM SETRAQPPCS PSGTASSMSH VEDSDSDAPP SPAGSEGLGR ENSP00000293894/1-446 ------MLDM SEARSQPPCS PSGTASSMSH VEDSDSDAPP SPAGSEGLGR BACU009239/1-383 ------MLDM SEIRAQPPCS PSGTASSMSH VEYSDSDAP- ---------- bmy_01900T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027633/1-468 SPRAAPMLDM SEARAQPPCS PSGTASSMSH VEDSDSDAPP SPAGSEGLGR 51 100 ENSTTRP00000005566/1-445 AAGAGGGGRG DAAEAADERF PACIRDAVSQ VLKGYDWSLV PMPVRGGGGG ENSP00000293894/1-446 AGVAVGGARG DPAEAADERF PACIRDAVSQ VLKGYDWSLV PMPVRGGGGG BACU009239/1-383 ---------- ----TRRRRL P------VPR VLKGYDWSLV PMPVRGGGGG bmy_01900T0/1-378 ---------- ---------- ---------- ---------- -MPVRGGGGG ENSBTAP00000027633/1-468 AAGAGGGGRG DAAEAADERF PACIRDAVSQ VLKGYDWSLV PMPVRGGGGG 101 150 ENSTTRP00000005566/1-445 ALKAKPHVKR PMNAFMVWAQ AARRKLADQY PHLHNAELSK TLGKLWRLLS ENSP00000293894/1-446 ALKAKPHVKR PMNAFMVWAQ AARRKLADQY PHLHNAELSK TLGKLWRLLS BACU009239/1-383 ALKAKPHVKR PMNAFMVWAQ AARRKLADQY PHLHNAELSK TLGKLWR--- bmy_01900T0/1-378 ALKAKPHVKR PMNAFMVWAQ AARRKLADQY PHLHNAELSK TLGKLWRLLS ENSBTAP00000027633/1-468 ALKAKPHVKR PMNAFMVWAQ AARRKLADQY PHLHNAELSK TLGKLWRLLS 151 200 ENSTTRP00000005566/1-445 ESEKRPFVEE AERLRVQHKK DHPDYKYQPR RRKSVKTGQS DSDSGAELGH ENSP00000293894/1-446 ESEKRPFVEE AERLRVQHKK DHPDYKYQPR RRKSAKAGHS DSDSGAELGP BACU009239/1-383 ----RGAMD- ---------- -----PWQPR ---------- -----ASVSL bmy_01900T0/1-378 ESEKRPFVEE AERLRVQHKK DHPDYKYQPR RRKSVKTGQS DSDSGAELGH ENSBTAP00000027633/1-468 ESEKRPFVEE AERLRVQHKK DHPDYKYQPR RRKSVKTGQS DSDSGAELGH 201 250 ENSTTRP00000005566/1-445 HP-GGTVYKT DAGLGDAHHH GDHTXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000293894/1-446 HPGGGAVYKA EAGLGDGHHH GDHTGQTHGP PTPPTTPKTE LQQAGAKPEL BACU009239/1-383 DP----VLQA DMSF------ --WKGQTHGP PTPPTTPKTD LHH-GGKQEL bmy_01900T0/1-378 HP-GGAVYKT DAGLGDAHHH GDHTGQTHGP PTPPTTPKTD LHH-GGKQEL ENSBTAP00000027633/1-468 HP--GSMYKT DAGLGDAHHH SDHTGQTHGP PTPPTTPKTD LHH-GGKQEL 251 300 ENSTTRP00000005566/1-445 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000293894/1-446 KLEGRRPVDS GRQNIDFSNV DISELSSEVM GTMDAFDVHE FDQYLPLGGP BACU009239/1-383 KLEGRRLVDS GRQNIDFSNV DISELSSEVI GNMDTFDVHE FDQYLPLNGH bmy_01900T0/1-378 KLEGRRLVDS GRQNIDFSNV DISELSSEVI GNMDTFDVHE FDQYLPLNGH ENSBTAP00000027633/1-468 KLEGRRLVDS GRQNIDFSNV DISELSSEVI GNMDTFDVHE FDQYLPLNGH 301 350 ENSTTRP00000005566/1-445 ---------- ---------X XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000293894/1-446 A--PPEPGQ- ----AYGG-A YFHA-----G ASPVWAHKSA PSASASPTET BACU009239/1-383 SALPTETGQP AAASSYGGTS YSHSGAGGIG ASPVWAHKGA LSASASPTEA bmy_01900T0/1-378 SALPTETGQP AAASSYGGTS YSHSGAAGIG ASPVWAHKGA PSASASPTEA ENSBTAP00000027633/1-468 SALPAEPGQP AAAGSYGGTS YSHSGAASIG ASPVWAHKGT PSASASPTEA 351 400 ENSTTRP00000005566/1-445 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000293894/1-446 GPPRPHIKTE QPSPGHYGDQ PRGSP---DY GSCSGQSSAT ---PAAPAGP BACU009239/1-383 GPPRPHIKTE QLSPGHYGDQ SHGSPGHTDY SSYSAQASVT TAASAAAASS bmy_01900T0/1-378 GPTRPHIKTE QLSPGHYGDQ SHGSPGHTDY SSYSAQASVT TAASAAAASS ENSBTAP00000027633/1-468 GPPRPHIKTE QLSPGHYGDQ SHGSPGHADY GSYSAQASVT TAAPAAAASS 401 450 ENSTTRP00000005566/1-445 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV ENSP00000293894/1-446 FAGSQGDYGD LQASSYYGAY PGYAPGLYQY PCFHSPRRPY ASPLLNGLAL BACU009239/1-383 FTSSQCDYTD LQAPNYYGPY PGYPSGLYQY PYFHSPRRPY ASPLLGGLSV bmy_01900T0/1-378 FTSSQCDYTD LQAPNYYGPY PGYPSGLYQY PYFHSPRRPY ASPLLGGLSV ENSBTAP00000027633/1-468 FTSSQCDYTD LQAPSYYGPF PGYPSGLYQY PYFHSPRRPY ASPLLGGLSV 451 500 ENSTTRP00000005566/1-445 PPAHSPPSNW EQPVYTTLTR P ENSP00000293894/1-446 PPAHSPTSHW DQPVYTTLTR P BACU009239/1-383 PPAHSPPSNW EQPVYTTLTR P bmy_01900T0/1-378 PPAHSPPSNW EQPVYTTLTR P ENSBTAP00000027633/1-468 PPAHSPPSNW EQPVYTTLTR P