KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:26 2014 Check: 00 .. Name: ENSP00000351631/1-339 Len: 381 Check: 4140 Weight: 1.00 Name: ENSTTRP00000005961/1-291 Len: 381 Check: 4520 Weight: 1.00 Name: ENSBTAP00000027650/1-339 Len: 381 Check: 2874 Weight: 1.00 Name: bmy_12471T0/1-347 Len: 381 Check: 3450 Weight: 1.00 Name: BACU014473/1-339 Len: 381 Check: 3864 Weight: 1.00 // 1 50 ENSP00000351631/1-339 MAASALYACT KCTQRYPFEE LSQGQQLCK- ---------- ---------- ENSTTRP00000005961/1-291 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027650/1-339 MAASALYACT KCTQRYPFEE LSQGQQLCK- ---------- ---------- bmy_12471T0/1-347 MAASALYACT KCTQRYPFEE LSQGQQLCKE PEAAKLMASF FPVQESEASG BACU014473/1-339 MAASALYACT KCTQRYPFEE LSQGQQLCK- ---------- ---------- 51 100 ENSP00000351631/1-339 ---------- ---------- -ECRIAHPIV KCTYCRSEFQ QESKTNTICK ENSTTRP00000005961/1-291 ---------- ---------- -ECRIAHPIV KCTYCRSEFQ QE-------- ENSBTAP00000027650/1-339 ---------- ---------- -ECRIAHPIV KCTYCRSEFQ QESKTNTICK bmy_12471T0/1-347 LGTECSMIWS SSHPIKAGML SECRIAHPIV KCTYCRSEFQ QESKTNTICK BACU014473/1-339 ---------- ---------- -ECRIAHPIV KCTYCRSEFQ QESKTNTICK 101 150 ENSP00000351631/1-339 KCAQNVKQFG TPKPCQYCNI IAAFIGTKCQ RCTNSEKKYG PPQTCEQCKQ ENSTTRP00000005961/1-291 ---------- -PKPCQYCNI IAAFIGTKCQ RCTNSEKKYG PPQTCEQCKQ ENSBTAP00000027650/1-339 KCAQNVKQFG TPKPCQYCNI IAAFIGTKCQ RCTNSEKKYG PPQTCEQCKQ bmy_12471T0/1-347 KCAQNVKQFG TPKPCQYCNI IAAFIGTKCQ RCTNSEKKYG PPQTCEQCKQ BACU014473/1-339 KCAQNVKQFG TPKPCQYCNI IAAFIGTKCQ RCTNSEKKYG PPQTCEQCKQ 151 200 ENSP00000351631/1-339 QCAFDRKEEG RRKVDGKLLC WLCTLSYKRV LQKTKEQRKS LGSSHSNSSS ENSTTRP00000005961/1-291 QCAFDRKEEG RRKVDGKLLC WLCTLSYKRV LQKTKEQRKS LGSSHSNSSS ENSBTAP00000027650/1-339 QCAFDRKEEG RRKVDGKLLC WLCTLSYKRV LQKTKEQRKS LGSSHSNSSS bmy_12471T0/1-347 QCAFDRKEEG RRKVDGKLLC WLCTLSYKRV LQKTKEQRKS LGSSHSNSSS BACU014473/1-339 QCAFDRKEEG RRKVDGKLLC WLCTLSYKRV LQKTKEQRKS LGSSHSNSSS 201 250 ENSP00000351631/1-339 SSLTEKDQHH PKHHHHHHHH HHRHSSSHHK ISNLSPEEEQ GLWKQSHKSS ENSTTRP00000005961/1-291 SSHTEKDQHH SKHHHHHHHH HHRHSSSHHK ISNLSPEQEQ GLWKQSHKSS ENSBTAP00000027650/1-339 SSLTEKDQHH AKHHHHHHHH HHRHSSSHHK ISNLSPEQEQ GLWKQSHKSS bmy_12471T0/1-347 SSLTEKDQHH SKHHHHHHHH HHRHSSSHHK ISNLSPEQEQ GLWKQSHKSS BACU014473/1-339 SSLTEKDQHH SKHHHHHHHH HHRHSSSHHK ISNLSPEQEQ GLWKQSHKSS 251 300 ENSP00000351631/1-339 ATIQNETPKK KPKLESKPSN GDSSSINQSA DSGGTDNFVL ISQLKEEVMS ENSTTRP00000005961/1-291 AAIQNETPKK KPKLESKPSN GDSSSINQSA DSGGTDNFVL ISQLKEEVMS ENSBTAP00000027650/1-339 AAIQNETPKK KPKLESKPSN GDSSSINQSA DSGGTDNFVL ISQLKEEVMS bmy_12471T0/1-347 AAIQNETPKK KPKLESKPSN GDSSSINQSA DSGGTDNFVL ISQLKEEVMS BACU014473/1-339 AAIQNETPKK KPKLESKPSN GDSSSINQSA DSGGTDNFVL ISQLKEEVMS 301 350 ENSP00000351631/1-339 LKRLLQQRDQ TILEKDKKLT ELKADFQYQE SNLRTKMNSM EKAHKETVEQ ENSTTRP00000005961/1-291 LKRLLQQRDQ TILEKDKKLT ELKADFQYQE SNLRTKMNSM EKAHKETVEQ ENSBTAP00000027650/1-339 LKRLLQQRDQ TILEKDKKLT ELKADFQYQE SNLRTKMNSM EKAHKETVEQ bmy_12471T0/1-347 LKRLLQQRDQ TILEKDKK-- ---------- ---------- ---------- BACU014473/1-339 LKRLLQQRDQ TILEKDKKLT ELKADFQYQE SNLRTKMNSM EKAHKETVEQ 351 400 ENSP00000351631/1-339 LQAKNRELLK QVAALSKGKK FDKSGSILTS P ENSTTRP00000005961/1-291 LQAKNRELLK QVAALSKGKK FDKSGSILTS P ENSBTAP00000027650/1-339 LQAKNRELLK QVAALSKGKK FDKSGSILTS P bmy_12471T0/1-347 --AKNRELLK QVAALSKGKK FDKSGSILTS P BACU014473/1-339 LQAKNRELLK QVAALSKGKK FDKSGSILTS P