KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:33:28 2014 Check: 00 .. Name: bmy_17409T0/1-289 Len: 495 Check: 9894 Weight: 1.00 Name: ENSBTAP00000027660/1-495 Len: 495 Check: 3940 Weight: 1.00 Name: BACU018292/1-388 Len: 495 Check: 8260 Weight: 1.00 Name: ENSTTRP00000007899/1-483 Len: 495 Check: 3701 Weight: 1.00 // 1 50 bmy_17409T0/1-289 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027660/1-495 MSGGAPSGGG PGGSGRARTS SFAEPGGGGG GGGGGPGGSA SGPGGSGGGK BACU018292/1-388 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007899/1-483 MSGGAPSGGG PGGSGRARTS SFAEPGGGGG GGGGGPGGSA SGPGGSGGGK 51 100 bmy_17409T0/1-289 -----MGGGV GASSSGGGPT GSGGGGSGGP GAGTSFPPPG VKLGRDSGKV ENSBTAP00000027660/1-495 TSVGAMGGGV GASSSGGGPG GSGGGGSGGP GAGTSFPPPG VKLGRDSGKV BACU018292/1-388 ---------- ---------- ---------- ---------- -----DSGKV ENSTTRP00000007899/1-483 TSVGAMGGGV GASSSGGGPS GSGGGGSGGP GAGTSFPPPG VKLGRDSGKV 101 150 bmy_17409T0/1-289 TTVVATLGQG PERSQEVAYT DIKVIGSGSF GVVYQARLAD TRELVAIKKV ENSBTAP00000027660/1-495 TTVVATLGQG PERSQEVAYT DIKVIGSGSF GVVYQARLAD TRELVAIKKV BACU018292/1-388 TTVVATLGQG PERSQEVAYT DIKVIGSGSF GVVYQARLAD TRELVAIKKV ENSTTRP00000007899/1-483 TTVVATLGQG PERSQEVAYT DIKVIGSGSF GVVYQARLAD TRELVAIKKV 151 200 bmy_17409T0/1-289 LQDKRFKNRE LQIMRKLDHC NIVRLRYFFY SSGEKKDELY LNLVLEYVPE ENSBTAP00000027660/1-495 LQDKRFKNRE LQIMRKLDHC NIVRLRYFFY SSGEKKDELY LNLVLEYVPE BACU018292/1-388 LQDKRFKNRE LQIMRKLDHC NIVRLRYFFY SSGEKKDELY LNLVLEYVPE ENSTTRP00000007899/1-483 LQDKRFKNRE LQIMRKLDHC NIVRLRYFFY SSGEKKDELY LNLVLEYVPE 201 250 bmy_17409T0/1-289 TVYRVARHFT KAKLTIPIIY VKV------- -----GRQAG C--------- ENSBTAP00000027660/1-495 TVYRVARHFT KAKLSIPIIY VKVYMYQLFR SLAYIHSQGV CHRDIKPQNL BACU018292/1-388 TVYRVARHFT KAKLTIPIIY VKVYMYQLFR SLAYIHSQGV CHRDIKPQNL ENSTTRP00000007899/1-483 TVYRVARHFT KAKLTIPIIY VKVYMYQLFR SLAYIHSQGV CHRDIKPQNL 251 300 bmy_17409T0/1-289 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027660/1-495 LVDPDTAVLK LCDFGSAKQL VRGEPNVSYI CSRYYRAPEL IFGATDYTSS BACU018292/1-388 LVDPDTAVLK LCDFGSAKQL VRGEPNVSYI CSRYYRAPEL IFGATDYTSS ENSTTRP00000007899/1-483 LVDPDTAVLK LCDFGSAKQL VRGEPNVSYI CSRYYRAPEL IFGATDYTSS 301 350 bmy_17409T0/1-289 ---WGPG--- ---------- ---------- --------PQ SQELRTDTPA ENSBTAP00000027660/1-495 IDVWSAGCVL AELLLGQPIF PGDSGVDQLV EIIKVLGTPS REQIREMNPN BACU018292/1-388 IDVWSAGCVL AELLLGQPIF PGDSGVDQLV EIIKVLGTPT REQIREMNPN ENSTTRP00000007899/1-483 IDVWSAGCVL AELLLGQPIF PGDSGVDQLV EIIKVLGTPT REQIREMNPN 351 400 bmy_17409T0/1-289 SVVSLISKFF VGLWRPHVPC PCP------- -----YTPRD ---------- ENSBTAP00000027660/1-495 YTEFKFPQIK AHPWTKVFKS RTPPEAIALC SSLLEYTPSS RLSPLEACAH BACU018292/1-388 YTEFKFPQIK AHPWTKVFKS RTPPEAIALC SSLLEYTPSS RLSPLEACAH ENSTTRP00000007899/1-483 YTEFKFPQIK AHPWTKVFKS RTPPEAIALC SSLLEYTPSS RLSPLEACAH 401 450 bmy_17409T0/1-289 ---------G ARQRQGSPTQ GLTQ--SGRQ ADQAGEAAWV HTGSPLVPVS ENSBTAP00000027660/1-495 SFFDELRCPG TQLPNNRPLP PLFNFSPGEL TIQPSLNAIL IPPHLRSPAG BACU018292/1-388 SFFDELRCPG TQLPNNRPLP PLFNFSPGEL TIQPSLNAIL IPPHLRSPAG ENSTTRP00000007899/1-483 SFFDELRCPG TQLPNNRPLP PLFNFSPGEL TIQPSLNAIL IPPHLRSPAG 451 500 bmy_17409T0/1-289 VGGVSSESRW GPRMQRGDDE VRVLAFGALA EG-------- ----- ENSBTAP00000027660/1-495 TASLTPSSQA LSEAQTSSDW QSTDNTATLP PGLHLLQPPH LLCPL BACU018292/1-388 TASLTPSSQA LSEAQTGPDW QSTDATAPLT NSS------- ----- ENSTTRP00000007899/1-483 TASLTPSSQA LSEAQTGPDW QSTDATAPLT NSS------- -----