KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:28 2014 Check: 00 .. Name: ENSTTRP00000016277/1-366 Len: 471 Check: 5506 Weight: 1.00 Name: BACU008078/1-454 Len: 471 Check: 4085 Weight: 1.00 Name: bmy_04687T0/1-331 Len: 471 Check: 2934 Weight: 1.00 Name: ENSP00000352438/1-366 Len: 471 Check: 9900 Weight: 1.00 Name: ENSBTAP00000027662/1-349 Len: 471 Check: 8833 Weight: 1.00 // 1 50 ENSTTRP00000016277/1-366 MDTGVIEGGL NVTLTIRLLM HGKEVGSIIG KKGESVKKMR EESGARINIS BACU008078/1-454 MDTGVIEGGL NVTLTIRLLM HGKEVGSIIG KKGESVKKMR EESGARINIS bmy_04687T0/1-331 MDTGVIEGGL NVTLTIRLLM HGKEVGSIIG KKGESVKKMR EESGARINIS ENSP00000352438/1-366 MDTGVIEGGL NVTLTIRLLM HGKEVGSIIG KKGESVKKMR EESGARINIS ENSBTAP00000027662/1-349 MDTGVIEGGL NVTLTIRLLM HGKEVGSIIG KKGESVKKMR EESGARINIS 51 100 ENSTTRP00000016277/1-366 EGNCPERIIT LAGPTNAIFK AFAMIIDKLE EDISSSMTNS TAASRPPVTL BACU008078/1-454 EGNCPERIIT LAGPTNAIFK AFAMIIDKLE EDISSSMTNS TAASRPPVTL bmy_04687T0/1-331 EGNCPERIIT LAGPTNAIFK AFAMIIDKLE EDISSSMTNS TAASRPPVTL ENSP00000352438/1-366 EGNCPERIIT LAGPTNAIFK AFAMIIDKLE EDISSSMTNS TAASRPPVTL ENSBTAP00000027662/1-349 EGNCPERIIT LAGPTNAIFK AFAMIIDKLE EDISSSMTNS TAASRPPVTL 101 150 ENSTTRP00000016277/1-366 RLVVPASQCG SLIGKGGCKI KEIRESTGAQ VQVAGDMLPN STERAITIAG BACU008078/1-454 RLVVPASQCG SLIGKGGCKI KEIRESTGAQ VQVAGDMLPN STERAITIAG bmy_04687T0/1-331 RLVVPASQCG SLIGKGGCKI KEIRESTGAQ VQVAGDMLPN STERAITIAG ENSP00000352438/1-366 RLVVPASQCG SLIGKGGCKI KEIRESTGAQ VQVAGDMLPN STERAITIAG ENSBTAP00000027662/1-349 RLVVPASQCG SLIGKGGCKI KEIRESTGAQ VQVAGDMLPN STERAITIAG 151 200 ENSTTRP00000016277/1-366 IPQSIIECVK QICVVMLEXX XXXXXXXXXX XXXXXXXXXX XXXXXXXNKH BACU008078/1-454 IPQSIIECVK QICVVMLE-- --SPPKGVTI PYRPKPSSSP VIFAGGQDRY bmy_04687T0/1-331 IPQSIIECVK QICVVMLE-- --SPPKGVTI PYRPKPSSSP VIFAGGQ--- ENSP00000352438/1-366 IPQSIIECVK QICVVMLETL SQSPPKGVTI PYRPKPSSSP VIFAGGQDRY ENSBTAP00000027662/1-349 IPQSIIECVK QICVVMLE-- --SPPKGVTI PYRPKPSSSP VIFAGGQDRY 201 250 ENSTTRP00000016277/1-366 RIGRDYANXX XXXXXXXXXX XXXXXXXXAY TIQGQYAIPQ PDLTKLHQLA BACU008078/1-454 STGSDSASFP HTTPSMCLNP DLEGPPLEAY TIQGQYAIPQ PDLTKLHQLA bmy_04687T0/1-331 ---------- ---------- --------AY TIQGQYAIPQ PDLTKLHQLA ENSP00000352438/1-366 STGSDSASFP HTTPSMCLNP DLEGPPLEAY TIQGQYAIPQ PDLTKLHQLA ENSBTAP00000027662/1-349 STGSDSASFP HTTPSMCLNP DLEGPPLEAY TIQGQYAIPQ PDLTKLHQLA 251 300 ENSTTRP00000016277/1-366 MQQSHFPMTH GNTGFSGIES SSPEVKGYWA GLDASAQTTS HELTIPNDLI BACU008078/1-454 MQQSHFPMTH GNTGFS---- ---------A GLDASAQTTS HELTIPNDLI bmy_04687T0/1-331 MQQSHFPMTH GNTGFSGIES SSPEVKGYWA GLDASAQTTS HELTIPNDLI ENSP00000352438/1-366 MQQSHFPMTH GNTGFSGIES SSPEVKGYWA GLDASAQTTS HELTIPNDLI ENSBTAP00000027662/1-349 MQQSHFPMTH GNTGFS---- ---------A GLDASAQTTS HELTIPNDLI 301 350 ENSTTRP00000016277/1-366 GCIIGRQGAK INEIRQMSGA QIKIANPVEG STDRQVTITG SAASISLAQY BACU008078/1-454 GCIIGRQGAK INEIRQMSGA QIKIANPVEG STDRQVTITG SAASISLAQY bmy_04687T0/1-331 GCIIGRQGAK INEIRQMSGA QIKIANPVEG STDRQVTITG SAASISLAQY ENSP00000352438/1-366 GCIIGRQGAK INEIRQMSGA QIKIANPVEG STDRQVTITG SAASISLAQY ENSBTAP00000027662/1-349 GCIIGRQGAK INEIRQMSGA QIKIANPVEG STDRQVTITG SAASISLAQY 351 400 ENSTTRP00000016277/1-366 LINVRLS--- ---------- ---------- ---------- ---------- BACU008078/1-454 LINVSLENAK PSSQAASVTI PDHLSINLSQ PSTPSSSSSS STTTPSLATA bmy_04687T0/1-331 LINVRLS--- ---------- ---------- ---------- ---------- ENSP00000352438/1-366 LINVRLS--- ---------- ---------- ---------- ---------- ENSBTAP00000027662/1-349 LINVRLS--- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000016277/1-366 ---------- ---------- ---------- ------SETG GMGSS----- BACU008078/1-454 GTSDAPSSLP NPLPTAPCVS SLLGMKPIPL LALNVVSAAK GAGASATTTT bmy_04687T0/1-331 ---------- ---------- ---------- ------SETG GMGSS----- ENSP00000352438/1-366 ---------- ---------- ---------- ------SETG GMGSS----- ENSBTAP00000027662/1-349 ---------- ---------- ---------- ------SETG GMGSS----- 451 500 ENSTTRP00000016277/1-366 ---------- ---------- - BACU008078/1-454 TSAVPCVTNK LKGEKQRFSP Y bmy_04687T0/1-331 ---------- ---------- - ENSP00000352438/1-366 ---------- ---------- - ENSBTAP00000027662/1-349 ---------- ---------- -