KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:30 2014 Check: 00 .. Name: bmy_10238T0/1-288 Len: 377 Check: 2106 Weight: 1.00 Name: ENSP00000311300/1-376 Len: 377 Check: 2814 Weight: 1.00 Name: ENSBTAP00000027681/1-375 Len: 377 Check: 7195 Weight: 1.00 Name: BACU003489/1-376 Len: 377 Check: 1408 Weight: 1.00 Name: ENSTTRP00000016055/1-264 Len: 377 Check: 9234 Weight: 1.00 // 1 50 bmy_10238T0/1-288 ----MRPGPI QPWWREGEER G-----KACI PYPHP----- ---------- ENSP00000311300/1-376 MALTAHPSCL LALLVAGLAQ GIRGPLRAQD LGPQPLELKE AFKLFQIQFN ENSBTAP00000027681/1-375 MAPTVHLSCL LALLVAGLAQ GIKDSLRGQD PGPQPLELKE VFRLFQMQYN BACU003489/1-376 MSLTVHLSYL LALLVAGLAQ GIKGSLRGQD PGPQPLELKE VFTLFQIRYN ENSTTRP00000016055/1-264 MSLTVHLSCL LALLVAGLAQ GIKSSLRGQD PGPQPLELKE VFTLFQIQYN 51 100 bmy_10238T0/1-288 ----HPSTTS KTATVAG--- ---------- ---------P W--------- ENSP00000311300/1-376 RSYLSPEEHA HRLDIFAHNL AQAQRLQEED LGTAEFGVTP FSDLTEEEFG ENSBTAP00000027681/1-375 RSYPNPAEYA RRLDIFAQNL AKAQRLQEED LGTAEFGVTQ FSDLTEEEFV BACU003489/1-376 RSYSHPAEHA RRLDIFARNL AKAQQLQEED LGTAEFGVTP FSDLTEEEFG ENSTTRP00000016055/1-264 RSYSHPAEHA RRLDIFARNL AKAQQLQEED LGTAEFGVTP FSDLTEEEFG 101 150 bmy_10238T0/1-288 QQRATSRPCG PSNTISL--- ---------- ---WK----- -SPCK----- ENSP00000311300/1-376 QLYGYRRAAG GVPSMGREIR SEEPEESVPF SCDWRKVASA ISPIKDQKNC ENSBTAP00000027681/1-375 QLYGSQ-VAG EALGVSRKVG SEEWGESEPQ TCDWR-KVGT ISPVRDQRNC BACU003489/1-376 QLYGHQRVAG EAPSVSQKVG SEEWGQSVPP TCDWRKKAGI ISSIRNQQNC ENSTTRP00000016055/1-264 QLYGHQRVAG EAPSVSQKVG SEEWGQSVPL TCDWRKKAGI ISPIRNQQNC 151 200 bmy_10238T0/1-288 --VWLGEGTC VTEAGMPEAR APTLSLLA-P ELLDCDRCGN GCKGGFVWDA ENSP00000311300/1-376 NCCWAMAAAG NIETLWRISF WDFVDVSV-Q ELLDCGRCGD GCHGGFVWDA ENSBTAP00000027681/1-375 NCCWAMAAAG NIEALWAIKF RHFVEVSVQP ELLDCDRCGN GCRGGFVWDA BACU003489/1-376 NCCWAMAAAG NIEALWAIKY HQSLEVSV-Q ELLDCDRCGN GCKGGFVWDA ENSTTRP00000016055/1-264 NCCWAMAAAG NIEALWAIKN DQSLEVSV-Q ELLDCDRCGN GCKGGFVCDA 201 250 bmy_10238T0/1-288 FITVLNTSGL ASDKDYPFKG NGKTHRCLAK KYKKVAWIQD FIMLQPCEQS ENSP00000311300/1-376 FITVLNNSGL ASEKDYPFQG KVRAHRCHPK KYQKVAWIQD FIMLQNNEHR ENSBTAP00000027681/1-375 FLTVLNNSGL ASEKDYPFNG SGKTHRCLAK KYKKVAWIQD FIILQACEQS BACU003489/1-376 FITVLNNSGL ASDKDYPFKG NSKTHRCLAK KHKKVAWIQD FIMLQPCEQS ENSTTRP00000016055/1-264 FITVLNNSGL ASDKDYPFKG NSKPHRCQAK KHKKVAWIQD FIMLQPCEQS 251 300 bmy_10238T0/1-288 IARYLATQGP ITVTINMKLL QQYQKGVIKA TPTTCDPQLV DHSVLLVGFG ENSP00000311300/1-376 IAQYLATYGP ITVTINMKPL QLYRKGVIKA TPTTCDPQLV DHSVLLVGFG ENSBTAP00000027681/1-375 MARHLATEGP ITVTINMTLL QQYQKGVIKA TPTTCDPTQV DHSVLLVGFG BACU003489/1-376 IARYLATQGP ITVTINMKLL QQYQKGVIKA TPTTCDPQLV NHSVLLVGFG ENSTTRP00000016055/1-264 IARYLATQGP ITVTI----- ---------- ---------- ---------- 301 350 bmy_10238T0/1-288 KSKSVEGRQA EAISSRSHPH PRYSIPYWIL KNSWGANWGE EGYFRLHRGS ENSP00000311300/1-376 SVKSEEGIWA ETVSSQSQPQ PPHPTPYWIL KNSWGAQWGE KGYFRLHRGS ENSBTAP00000027681/1-375 KTKLVEGRQG KAASFGSHAR PRRSMAYWIL KNSWGPQWGE EGYFRLHRGS BACU003489/1-376 KSKSVEGRQA EAISSRSHPH PRYSIPYWIL KNSWGANWGE EGYFRLHRGS ENSTTRP00000016055/1-264 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_10238T0/1-288 NTCGITKYPF TARVDKPVKK HQVSCPP ENSP00000311300/1-376 NTCGITKFPL TARVQKPDMK PRVSCPP ENSBTAP00000027681/1-375 NTCGITKFPV TARVDKPKKQ HQVSCPP BACU003489/1-376 NTCGITKYPF TARVDKPVKK HQVSCPP ENSTTRP00000016055/1-264 ---------- ---------- -------