KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:33:30 2014 Check: 00 ..
Name: bmy_10238T0/1-288 Len: 377 Check: 2106 Weight: 1.00
Name: ENSP00000311300/1-376 Len: 377 Check: 2814 Weight: 1.00
Name: ENSBTAP00000027681/1-375 Len: 377 Check: 7195 Weight: 1.00
Name: BACU003489/1-376 Len: 377 Check: 1408 Weight: 1.00
Name: ENSTTRP00000016055/1-264 Len: 377 Check: 9234 Weight: 1.00
//
1 50
bmy_10238T0/1-288 ----MRPGPI QPWWREGEER G-----KACI PYPHP----- ----------
ENSP00000311300/1-376 MALTAHPSCL LALLVAGLAQ GIRGPLRAQD LGPQPLELKE AFKLFQIQFN
ENSBTAP00000027681/1-375 MAPTVHLSCL LALLVAGLAQ GIKDSLRGQD PGPQPLELKE VFRLFQMQYN
BACU003489/1-376 MSLTVHLSYL LALLVAGLAQ GIKGSLRGQD PGPQPLELKE VFTLFQIRYN
ENSTTRP00000016055/1-264 MSLTVHLSCL LALLVAGLAQ GIKSSLRGQD PGPQPLELKE VFTLFQIQYN
51 100
bmy_10238T0/1-288 ----HPSTTS KTATVAG--- ---------- ---------P W---------
ENSP00000311300/1-376 RSYLSPEEHA HRLDIFAHNL AQAQRLQEED LGTAEFGVTP FSDLTEEEFG
ENSBTAP00000027681/1-375 RSYPNPAEYA RRLDIFAQNL AKAQRLQEED LGTAEFGVTQ FSDLTEEEFV
BACU003489/1-376 RSYSHPAEHA RRLDIFARNL AKAQQLQEED LGTAEFGVTP FSDLTEEEFG
ENSTTRP00000016055/1-264 RSYSHPAEHA RRLDIFARNL AKAQQLQEED LGTAEFGVTP FSDLTEEEFG
101 150
bmy_10238T0/1-288 QQRATSRPCG PSNTISL--- ---------- ---WK----- -SPCK-----
ENSP00000311300/1-376 QLYGYRRAAG GVPSMGREIR SEEPEESVPF SCDWRKVASA ISPIKDQKNC
ENSBTAP00000027681/1-375 QLYGSQ-VAG EALGVSRKVG SEEWGESEPQ TCDWR-KVGT ISPVRDQRNC
BACU003489/1-376 QLYGHQRVAG EAPSVSQKVG SEEWGQSVPP TCDWRKKAGI ISSIRNQQNC
ENSTTRP00000016055/1-264 QLYGHQRVAG EAPSVSQKVG SEEWGQSVPL TCDWRKKAGI ISPIRNQQNC
151 200
bmy_10238T0/1-288 --VWLGEGTC VTEAGMPEAR APTLSLLA-P ELLDCDRCGN GCKGGFVWDA
ENSP00000311300/1-376 NCCWAMAAAG NIETLWRISF WDFVDVSV-Q ELLDCGRCGD GCHGGFVWDA
ENSBTAP00000027681/1-375 NCCWAMAAAG NIEALWAIKF RHFVEVSVQP ELLDCDRCGN GCRGGFVWDA
BACU003489/1-376 NCCWAMAAAG NIEALWAIKY HQSLEVSV-Q ELLDCDRCGN GCKGGFVWDA
ENSTTRP00000016055/1-264 NCCWAMAAAG NIEALWAIKN DQSLEVSV-Q ELLDCDRCGN GCKGGFVCDA
201 250
bmy_10238T0/1-288 FITVLNTSGL ASDKDYPFKG NGKTHRCLAK KYKKVAWIQD FIMLQPCEQS
ENSP00000311300/1-376 FITVLNNSGL ASEKDYPFQG KVRAHRCHPK KYQKVAWIQD FIMLQNNEHR
ENSBTAP00000027681/1-375 FLTVLNNSGL ASEKDYPFNG SGKTHRCLAK KYKKVAWIQD FIILQACEQS
BACU003489/1-376 FITVLNNSGL ASDKDYPFKG NSKTHRCLAK KHKKVAWIQD FIMLQPCEQS
ENSTTRP00000016055/1-264 FITVLNNSGL ASDKDYPFKG NSKPHRCQAK KHKKVAWIQD FIMLQPCEQS
251 300
bmy_10238T0/1-288 IARYLATQGP ITVTINMKLL QQYQKGVIKA TPTTCDPQLV DHSVLLVGFG
ENSP00000311300/1-376 IAQYLATYGP ITVTINMKPL QLYRKGVIKA TPTTCDPQLV DHSVLLVGFG
ENSBTAP00000027681/1-375 MARHLATEGP ITVTINMTLL QQYQKGVIKA TPTTCDPTQV DHSVLLVGFG
BACU003489/1-376 IARYLATQGP ITVTINMKLL QQYQKGVIKA TPTTCDPQLV NHSVLLVGFG
ENSTTRP00000016055/1-264 IARYLATQGP ITVTI----- ---------- ---------- ----------
301 350
bmy_10238T0/1-288 KSKSVEGRQA EAISSRSHPH PRYSIPYWIL KNSWGANWGE EGYFRLHRGS
ENSP00000311300/1-376 SVKSEEGIWA ETVSSQSQPQ PPHPTPYWIL KNSWGAQWGE KGYFRLHRGS
ENSBTAP00000027681/1-375 KTKLVEGRQG KAASFGSHAR PRRSMAYWIL KNSWGPQWGE EGYFRLHRGS
BACU003489/1-376 KSKSVEGRQA EAISSRSHPH PRYSIPYWIL KNSWGANWGE EGYFRLHRGS
ENSTTRP00000016055/1-264 ---------- ---------- ---------- ---------- ----------
351 400
bmy_10238T0/1-288 NTCGITKYPF TARVDKPVKK HQVSCPP
ENSP00000311300/1-376 NTCGITKFPL TARVQKPDMK PRVSCPP
ENSBTAP00000027681/1-375 NTCGITKFPV TARVDKPKKQ HQVSCPP
BACU003489/1-376 NTCGITKYPF TARVDKPVKK HQVSCPP
ENSTTRP00000016055/1-264 ---------- ---------- -------