KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:32 2014 Check: 00 .. Name: ENSTTRP00000016193/1-780 Len: 782 Check: 1457 Weight: 1.00 Name: bmy_10438T0/1-592 Len: 782 Check: 1317 Weight: 1.00 Name: ENSP00000285398/1-782 Len: 782 Check: 1627 Weight: 1.00 Name: BACU009906/1-782 Len: 782 Check: 1193 Weight: 1.00 Name: ENSBTAP00000027687/1-782 Len: 782 Check: 2868 Weight: 1.00 // 1 50 ENSTTRP00000016193/1-780 MGKRDRADRX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10438T0/1-592 ---------- KKKSKKRHYE DEEDDEDDAP GNESQEAVPS AAGKQVDESG ENSP00000285398/1-782 MGKRDRADRD KKKSRKRHYE DEEDDEEDAP GNDPQEAVPS AAGKQVDESG BACU009906/1-782 MGKRDRGDRE KKKSKKRHYE DEEDDEDDAP GNDSQEAVPS AAGKQVDESG ENSBTAP00000027687/1-782 MGKRDRADRE KKKSKKRHYE DEEDEEDDAP GNDTQEAVPS AAGKQVDESG 51 100 ENSTTRP00000016193/1-780 XXXXXXGAKD YRLQMPLKDD HTS--LWVAP DGHIFLEAFS PVYKYAQDFL bmy_10438T0/1-592 TKVDEYGAKD YRLQMPLKDD HTSRPLWVAP DGHIFLEAFS PVYKYAQDFL ENSP00000285398/1-782 TKVDEYGAKD YRLQMPLKDD HTSRPLWVAP DGHIFLEAFS PVYKYAQDFL BACU009906/1-782 TKVDEYGAKD YRLQMPLKDD HTSRPLWVAP DGHIFLEAFS PVYKYAQDFL ENSBTAP00000027687/1-782 TKVDEYGAKD YRLQMPLKDD HTSRPLWVAP DGHIFLEAFS PVYKYAQDFL 101 150 ENSTTRP00000016193/1-780 VAIAEPVCRP THVHEYKLTA YSLYAAVSVG LQTSDITEYL RKLSKTGVPD bmy_10438T0/1-592 VAIAEPVCRP THVHEYKLTA YSLYAAVSVG LQTSDITEYL RKLSKTG--- ENSP00000285398/1-782 VAIAEPVCRP THVHEYKLTA YSLYAAVSVG LQTSDITEYL RKLSKTGVPD BACU009906/1-782 VAIAEPVCRP THVHEYKLTA YSLYAAVSVG LQTSDITEYL RKLSKTGVPD ENSBTAP00000027687/1-782 VAIAEPVCRP THVHEYKLTA YSLYAAVSVG LQTSDITDYL RKLSKTGVPE 151 200 ENSTTRP00000016193/1-780 GIIQFIKLCT VSYGKVKLVL KHNRYFVESS HPDVIQHLLQ DPMIRECRLR bmy_10438T0/1-592 -------LCT VSYGKVKLVL KHNRYFVESS HPDVIQHLLQ DPMIRECRLR ENSP00000285398/1-782 GIMQFIKLCT VSYGKVKLVL KHNRYFVESC HPDVIQHLLQ DPVIRECRLR BACU009906/1-782 GIIQFIKLCT VSYGKVKLVL KHNRYFVESS HPDVIQHLLQ DPMIRECRLR ENSBTAP00000027687/1-782 GIIQFIKLCT VSYGKVKLVL KHNRYFVESS HPDVIQHLLQ DPVIRECRLR 201 250 ENSTTRP00000016193/1-780 NSEGEATELI TETFTSKSAI AKSAEGSGGP STSRVTDPQG KSDIPTDLFD bmy_10438T0/1-592 NSEGEATELI TETFTSXSAI AKSAEGSGGP STSRVTDPQG KCDIPTDLFD ENSP00000285398/1-782 NSEGEATELI TETFTSKSAI SKTAESSGGP STSRVTDPQG KSDIPMDLFD BACU009906/1-782 NSEGEATEII TETFTSKSAI AKSAEGSGGP STSRVTDPQG KSDIPTDLFD ENSBTAP00000027687/1-782 NSEGEATELI TETFTSKSAI AKSVEGSGGP STSRVTDPQG KSDIPTDLFD 251 300 ENSTTRP00000016193/1-780 FYEQMDKDEE EEEETQTVSF EVKHEMIEEL QKRCIHLEYP LLAEYDFRND bmy_10438T0/1-592 FYEQMDKDEE EEEETQTVSF EVKQEMIEEL QKRCIHLEYP LLAEYDFRND ENSP00000285398/1-782 FYEQMDKDEE EEEETQTVSF EVKQEMIEEL QKRCIHLEYP LLAEYDFRND BACU009906/1-782 FYEQMDKDEE EEEETQTVSF EVKQEMIEEL QKRCIHLEYP LLAEYDFRND ENSBTAP00000027687/1-782 FYEQMDKDEE EEEETQTVSF EVKQEMIEEL QKRCIHLEYP LLAEYDFRND 301 350 ENSTTRP00000016193/1-780 SVNPDINIDL KPTAVLRPYQ EKSLRKMFGN GRARSGVIVL PCXXXXXXXX bmy_10438T0/1-592 SVNPDINIDL KPTAVLRPYQ EKSLRKMFGN GRARSGVIVL PCGAGKSLVG ENSP00000285398/1-782 SVNPDINIDL KPTAVLRPYQ EKSLRKMFGN GRARSGVIVL PCGAGKSLVG BACU009906/1-782 SVNPDINIDL KPTAVLRPYQ EKSLRKMFGN GRARSGVIVL PCGAGKSLVG ENSBTAP00000027687/1-782 SVNPDINIDL KPTAVLRPYQ EKSLRKMFGN GRARSGVIVL PCGAGKSLVG 351 400 ENSTTRP00000016193/1-780 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10438T0/1-592 VTAACTVRKR CLVLGNSAVS VEQWKAQFKM WSTIDDSQIC RFTSDAKDKP ENSP00000285398/1-782 VTAACTVRKR CLVLGNSAVS VEQWKAQFKM WSTIDDSQIC RFTSDAKDKP BACU009906/1-782 VTAACTVRKR CLVLGNSAVS VEQWKAQFKM WSTIDDSQIC RFTSDAKDKP ENSBTAP00000027687/1-782 VTAACTVRKR CLVLGNSAVS VEQWKAQFKM WSTIDDSQIC RFTSDAKDKP 401 450 ENSTTRP00000016193/1-780 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXKM bmy_10438T0/1-592 IGCSIAISTY SMLGHTTKRS WEAERVMEWL KTQEWGLMIL DEVHTIPAKM ENSP00000285398/1-782 IGCSVAISTY SMLGHTTKRS WEAERVMEWL KTQEWGLMIL DEVHTIPAKM BACU009906/1-782 IGCSIAISTY SMLGHTTKRS WEAERVMEWL RTQEWGLMIL DEVHTIPAKM ENSBTAP00000027687/1-782 IGCSIAISTY SMLGHTTKRS WEAERVMEWL KTQEWGLMIL DEVHTIPAKM 451 500 ENSTTRP00000016193/1-780 FRRVLTIVQA HCKLGLTATL VREDDKIVDL NFLIGPKLYE ANWMELQNNG bmy_10438T0/1-592 FRRVLTIVQA HCKLGLTATL VREDDKIVDL NFLIGPKLYE ANWMELQNNG ENSP00000285398/1-782 FRRVLTIVQA HCKLGLTATL VREDDKIVDL NFLIGPKLYE ANWMELQNNG BACU009906/1-782 FRRVLTIVQA HCKLGLTATL VREDDKIVDL NFLIGPKLYE ANWMELQNNG ENSBTAP00000027687/1-782 FRRVLTIVQA HCKLGLTATL VREDDKIVDL NFLIGPKLYE ANWMELQNSG 501 550 ENSTTRP00000016193/1-780 YIAKVQCAEV WCPMSPEFYR EYVAIKTKKR ILLYTMNPNK FRACQFLIKF bmy_10438T0/1-592 YIAKVQCAEV WCPMSPEFYR EYVAIKTKKR ILLYTMNPNK FRACQFLIKF ENSP00000285398/1-782 YIAKVQCAEV WCPMSPEFYR EYVAIKTKKR ILLYTMNPNK FRACQFLIKF BACU009906/1-782 YIAKVQCAEV WCPMSPEFYR EYVAIKTKKR ILLYTMNPNK FRACQFLIKF ENSBTAP00000027687/1-782 YIAKVQCAEV WCPMSPEFYR EYVAIKTKKR ILLYTMNPNK FRACQFLIKF 551 600 ENSTTRP00000016193/1-780 HERRNDKIIV FADNVFALKE YAIRLNKPYI YGPTSQGERM QILQNFKHNP bmy_10438T0/1-592 HERRNDKIIV FADNVFALKE YAIRLNK--- ---------- ---------- ENSP00000285398/1-782 HERRNDKIIV FADNVFALKE YAIRLNKPYI YGPTSQGERM QILQNFKHNP BACU009906/1-782 HERRNDKIIV FADNVFALKE YAIRLNKPYI YGPTSQGERM QILQNFKHNP ENSBTAP00000027687/1-782 HERRNDKIIV FADNVFALKE YAIRLNKPYI YGPTSQGERM QILQNFKHNP 601 650 ENSTTRP00000016193/1-780 KINTIFISKV GDTSFDLPEA NVLIQISSHG GSRRQEAQRL GRVLRAKKGM bmy_10438T0/1-592 ---------- ---------- ---------- ---------- ---------- ENSP00000285398/1-782 KINTIFISKV GDTSFDLPEA NVLIQISSHG GSRRQEAQRL GRVLRAKKGM BACU009906/1-782 KINTIFISKV GDTSFDLPEA NVLIQISSHG GSRRQEAQRL GRVLRAKKGM ENSBTAP00000027687/1-782 KINTIFISKV GDTSFDLPEA NVLIQISSHG GSRRQEAQRL GRVLRAKKGM 651 700 ENSTTRP00000016193/1-780 VAEEYNAFFY SLVSQDTQEM AYSTKRQRFL VDQGYSFKVI TKLANMEEEE bmy_10438T0/1-592 ---------- ---------- ---------- ---------- ---------- ENSP00000285398/1-782 VAEEYNAFFY SLVSQDTQEM AYSTKRQRFL VDQGYSFKVI TKLAGMEEED BACU009906/1-782 VAEEYNAFFY SLVSQDTQEM AYSTKRQRFL VDQGYSFKVI TKLANMEEEE ENSBTAP00000027687/1-782 VAEEYNAFFY SLVSQDTQEM AYSTKRQRFL VDQGYSFKVI TKLAGMEEED 701 750 ENSTTRP00000016193/1-780 LAFSTKEEQQ QLLQKVLAAS DLDAEEEVVA GELGSKSSQX XRRFGTMSSM bmy_10438T0/1-592 -----KEEEA G------ASV HSDAGLQVLR VEQKARSSE- ---------- ENSP00000285398/1-782 LAFSTKEEQQ QLLQKVLAAT DLDAEEEVVA GEFGSRSSQA SRRFGTMSSM BACU009906/1-782 LAFSTKEEQQ QLLQKVLAAT DLDAEEEVVA GEFGSRSSQV SRRFGTMSSM ENSBTAP00000027687/1-782 LAFSTKEEQQ QLLQKVLAAT DLDAEEEVVA GEFGSKSSQV SRRFGTMSSM 751 800 ENSTTRP00000016193/1-780 SGADDTVYME YHSSRSKAST KHVHPLFKRF RK bmy_10438T0/1-592 ---------- ------KMSL RSL------- -- ENSP00000285398/1-782 SGADDTVYME YHSSRSKAPS KHVHPLFKRF RK BACU009906/1-782 SGADDTVYME YHSSRSKASN KHVHPLFKRF RK ENSBTAP00000027687/1-782 SGADDTVYME YHSSRSKTST KHVHPLFKRF RK