KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:42 2014 Check: 00 .. Name: ENSP00000328511/1-653 Len: 672 Check: 3519 Weight: 1.00 Name: ENSBTAP00000027710/1-661 Len: 672 Check: 1121 Weight: 1.00 Name: ENSTTRP00000006570/1-656 Len: 672 Check: 8181 Weight: 1.00 Name: bmy_18426T0/1-647 Len: 672 Check: 5368 Weight: 1.00 Name: BACU008865/1-661 Len: 672 Check: 1773 Weight: 1.00 // 1 50 ENSP00000328511/1-653 MEVAMVSAES SGCNSHMPYG YAAQARARER ERLAHSRAAA AAAVAAATAA ENSBTAP00000027710/1-661 MEVAMVSAES SGCNSHMPYG YAAQARARER ERLAHSRAAA AAAVAAATAA ENSTTRP00000006570/1-656 MEVAMVSAES SGCNSHMPYG YAAQARARER ERLAHSRAAA AAAVAAATAA bmy_18426T0/1-647 ---------- ------MPYG YAAQARARER ERLAHSRAAA AAAVAAATAA BACU008865/1-661 MEVAMVSAES SGCNSHMPYG YAAQARARER ERLAHSRAAA AAAVAAATAA 51 100 ENSP00000328511/1-653 VEGSGGSGGG S--HHHHQSR GACTSHDPQS SRGSRRRRRQ RSEKKKAHYR ENSBTAP00000027710/1-661 VEGGGGSGGG A-QHHHHPSR GACTSHDPQS GRGSRRRRRP HPEKKKVHHR ENSTTRP00000006570/1-656 VEGGGGSGGG AHHHHHHQLR GACTSQDPQS GRGSRRRRRQ RPEKKKVHHR bmy_18426T0/1-647 VEGGGGSGGG A-HHHHHQLR GACTSQDPQS GRGSRRRRRQ RPEKKKVHHR BACU008865/1-661 VEGGGGSGGG A-HHHHHQLR GACTSQDPQS GRGSRRRRRQ RPEKKKVHHR 101 150 ENSP00000328511/1-653 QSSFPHCSDL MPSGSEEKIL RELS------ ---EEEEDEE EEEEEEEEGR ENSBTAP00000027710/1-661 QSSFPHCSDL MPSGSEEKIL RDLS------ ---EEDEEED DEEDEEEEGR ENSTTRP00000006570/1-656 QSSFPHCSDL MPSGSEEKIL RDLS------ ---EEEEEEE EEEEEEEEGR bmy_18426T0/1-647 QSSFPHCSDL MPSGSEEKIL RDLSEEEEEE EEEEEEEEEE EEEEEEEEGR BACU008865/1-661 QSSFPHCSDL MPSGSEEKIL RDLS--EEEE EEEEEEEEEE EEEEEEEEGR 151 200 ENSP00000328511/1-653 FYYSEDDHGD ECSYTDLLPQ DEG------- -GGGYSSVRY SDCCERVVIN ENSBTAP00000027710/1-661 FYYSEEDHGE ECSYTDLLAQ DDGGGGGGGS GGGGYSSVRY SDCCERVVIN ENSTTRP00000006570/1-656 FRYSEDDRGD ECSYTDLLPQ DDAGG----- -GGGYSSVRY SDCCERVVIN bmy_18426T0/1-647 FYYSEDDHGD ECSYTDLLPQ DDGG------ -GGGYSSVRY SDCCERVVIN BACU008865/1-661 FYYSEDDHGD ECSYTDLLPQ DDAG------ -GGGYSSVRY SDCCERVVIN 201 250 ENSP00000328511/1-653 VSGLRFETQM KTLAQFPETL LGDPEKRTQY FDPLRNEYFF DRNRPSFDAI ENSBTAP00000027710/1-661 VSGLRFETQM KTLAQFPETL LGDPEKRTQY FDPLRNEYFF DRNRPSFDAI ENSTTRP00000006570/1-656 VSGLRFETQM KTLAQFPETL LGDPEKRTQY FDPLRNEYFF DRNRPSFDAI bmy_18426T0/1-647 VSGLRFETQM KTLAQFPETL LGDPEKRTQY FDPLRNEYFF DRNRPSFDAI BACU008865/1-661 VSGLRFETQM KTLAQFPETL LGDPEKRTQY FDPLRNEYFF DRNRPSFDAI 251 300 ENSP00000328511/1-653 LYYYQSGGRL KRPVNVPFDI FTEEVKFYQL GEEALLKFRE DEGFVREEED ENSBTAP00000027710/1-661 LYYYQSGGRL KRPVNVPFDI FTEEVKFYQL GEEALLKFRE DEGFVREEED ENSTTRP00000006570/1-656 LYYYQSGGRL KRPVNVPFDI FTEEVKFYQL GEEALLKFRE DEGFVREEED bmy_18426T0/1-647 LYYYQSGGRL KRPVNVPFDI FTEEVKFYQL GEEALLKFRE DEGFVRDEED BACU008865/1-661 LYYYQSGGRL KRPVNVPFDI FTEEVKFYQL GEEALLKFRE DEGFVRDEED 301 350 ENSP00000328511/1-653 RALPENEFKK QIWLLFEYPE SSSPARGIAI VSVLVILISI VIFCLETLPE ENSBTAP00000027710/1-661 RALPENEFKK QIWLLFEYPE SSSPARGIAI VSVLVILISI VIFCLETLPE ENSTTRP00000006570/1-656 RALPENEFKK QVWLLFEYPE SSSPARGIAI VSVLVILISI VIFCLETLPE bmy_18426T0/1-647 RALPESEFKK QIWLLFEYPE SSSPARGIAI VSVLVILISI VIFCLETLPE BACU008865/1-661 RALPESEFKK QIWLLFEYPE SSSPARGIAI VSVLVILISI VIFCLETLPE 351 400 ENSP00000328511/1-653 FRDDRDLVMA LSAGGHGGLL NDTSAPHLEN SGHTIFNDPF FIVETVCIVW ENSBTAP00000027710/1-661 FRDDRDLIMA LSTGGHGGLL NDTSAPHPEN SGHTIFNDPF FIVETVCIVW ENSTTRP00000006570/1-656 FRDDRDLITA LSTGGHSGLL NDTSAPHPEN SGHTIFNDPF FIVETVCIVW bmy_18426T0/1-647 FRDDRDLIMA LSTGGHSGLL NDTSAPHPEN SGHTIFNDPF FIVETVCIVW BACU008865/1-661 FRDDRDLIMA LSTGGHSGLL NDTSAPHPEN SGHTIFNDPF FIVETVCIVW 401 450 ENSP00000328511/1-653 FSFEFVVRCF ACPSQALFFK NIMNIIDIVS ILPYFITLGT DLAQQQGGGN ENSBTAP00000027710/1-661 FSFEFVVRCF ACPSQALFFK NIMNIIDIVS ILPYFITLGT DLAQQQGGGN ENSTTRP00000006570/1-656 FSFEFVVRCF ACPSQALFFK NIMNIIDIVS ILPYFITLGT DLAQQQGGGN bmy_18426T0/1-647 FSFEFVVRCF ACPSQALFFK NIMNIIDIVS ILPYFITLGT DLAQQQGGGN BACU008865/1-661 FSFEFVVRCF ACPSQALFFK NIMNIIDIVS ILPYFITLGT DLAQQQGGGN 451 500 ENSP00000328511/1-653 GQQQQAMSFA ILRIIRLVRV FRIFKLSRHS KGLQILGHTL RASMRELGLL ENSBTAP00000027710/1-661 GQQQQAMSFA ILRIIRLVRV FRIFKLSRHS KGLQILGHTL RASMRELGLL ENSTTRP00000006570/1-656 GQQQQAMSFA ILRIIRLVRV FRIFKLSRHS KGLQILGHTL RASMRELGLL bmy_18426T0/1-647 GQQQQAMSFA ILRIIRLVRV FRIFKLSRHS KGLQILGHTL RASMRELGLL BACU008865/1-661 GQQQQAMSFA ILRIIRLVRV FRIFKLSRHS KGLQILGHTL RASMRELGLL 501 550 ENSP00000328511/1-653 IFFLFIGVIL FSSAVYFAEA DEPTTHFQSI PDAFWWAVVT MTTVGYGDMK ENSBTAP00000027710/1-661 IFFLFIGVIL FSSAVYFAEA DEPTTHFQSI PDAFWWAVVT MTTVGYGDMK ENSTTRP00000006570/1-656 IFFLFIGVIL FSSAVYFAEA DEPTTHFQSI PDAFWWAVVT MTTVGYGDMK bmy_18426T0/1-647 IFFLFIGVIL FSSAVYFAEA DEPTTHFQSI PDAFWWAVVT MTTVGYGDMK BACU008865/1-661 IFFLFIGVIL FSSAVYFAEA DEPTTHFQSI PDAFWWAVVT MTTVGYGDMK 551 600 ENSP00000328511/1-653 PITVGGKIVG SLCAIAGVLT IALPVPVIVS NFNYFYHRET ENEEQTQLTQ ENSBTAP00000027710/1-661 PITVGGKIVG SLCAIAGVLT IALPVPVIVS NFNYFYHRET ENEEQTQLTQ ENSTTRP00000006570/1-656 PITVGGKIVG SLCAIAGVLT IALPVPVIVS NFNYFYHRET ENEEQTQLTQ bmy_18426T0/1-647 PITVGGKIVG SLCAIAGVLT IALPVPVIVS NFNYFYHRET ENEEQTQLTQ BACU008865/1-661 PITVGGKIVG SLCAIAGVLT IALPVPVIVS NFNYFYHRET ENEEQTQLTQ 601 650 ENSP00000328511/1-653 NAVSCPYLPS NLLKKFRSST SSSLGDKSEY LEMEEGVKES LCAKEEKCQG ENSBTAP00000027710/1-661 NAVSCPYLPS NLLKKFRSST SSSLGDKSEY LEMEEGVKES LCAKEK-CQG ENSTTRP00000006570/1-656 NAVSCPYLPS NLLKKFRSST SSSLGDKSEY LEMEEGVKES LCAKEK-CQG bmy_18426T0/1-647 NAVGCPYLPS NLLKKFRSST SSSLGDKSEY LEMEEGVKES LCAKEK-CQG BACU008865/1-661 NAVSCPYLPS NLLKKFRSST SSSLGDKSEY LEMEEGVKES LCAKEK-CQG 651 700 ENSP00000328511/1-653 KGDDSETDKN NCSNAKAVET DV ENSBTAP00000027710/1-661 KGDDSETDKN NCSNAKAVET DV ENSTTRP00000006570/1-656 KGDDSETDKN NCSNAKAVET DV bmy_18426T0/1-647 KGGDSETDKN NCSNAKAVET DV BACU008865/1-661 KGDDSETDKN NCSNAKAVET DV