KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:47 2014 Check: 00 .. Name: ENSP00000345773/1-468 Len: 524 Check: 5247 Weight: 1.00 Name: ENSBTAP00000027718/1-386 Len: 524 Check: 6568 Weight: 1.00 Name: bmy_09873T0/1-243 Len: 524 Check: 6665 Weight: 1.00 Name: BACU013811/1-358 Len: 524 Check: 2255 Weight: 1.00 Name: ENSTTRP00000010540/1-485 Len: 524 Check: 3295 Weight: 1.00 // 1 50 ENSP00000345773/1-468 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027718/1-386 ---------- ---------- ---------- ---------- -------LGD bmy_09873T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU013811/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010540/1-485 MEFSERKRSR KSQSFKLVSR DYHHEVCKIS EFSTDVNGKA KETQPIFLGD 51 100 ENSP00000345773/1-468 --MEIKKQIT GMRRLLNDST GRIYQRVGKE GEKLKEEPQD LDLVWPPRLN ENSBTAP00000027718/1-386 ESMEIKKQIT GMRRLLNDSA GRIYQRVGKE GEKLKEEPQD LDAIWPQRLN bmy_09873T0/1-243 --MEIKKQIT GMRRLLNDSA GRIYQRVGKE GEKLKEEPQD LDSIWPQRLN BACU013811/1-358 --MEIKKQIT GMRRLLNDSA GRIYQRVGKE GEKLKEEPQD LDSIWPQRLN ENSTTRP00000010540/1-485 ESMEIKKQIT GMRRLLNDSA GRIYQRVGKE GEKLKEEPQD LDSMWPPRLN 101 150 ENSP00000345773/1-468 SSAEAPQSLH PSSRGVWNEL PPQSGQFSGQ YGTRSRTFQS QPHPTTSSN- ENSBTAP00000027718/1-386 -SAEAPPSLH PSSRGTWNEL PPQSGQFSGQ YGTRSRTFQS QPHTAGSSNG bmy_09873T0/1-243 -SAEAPPSLH PSSRGAWNEL PPQSGQFSGQ YGTRSRTFQS QPHSAGSSN- BACU013811/1-358 -PAEAPPSLH PSSRGAWNEL PPQSGQFSGQ YGTRSRTFQS QPHSAGSSN- ENSTTRP00000010540/1-485 -PVEALPSLH PSSRGAWNEL PAQSGRFSGQ YGTRSRTFQS QSHAAGSSN- 151 200 ENSP00000345773/1-468 -GELPVVNSS AGSNCCTCNC QSTLQAILQE LKTMRKLMQI QAVGTQNRQQ ENSBTAP00000027718/1-386 SGELPVVNSS AGSNCCTCNC QSTLQAILQE LKTMRKLMQI QAVGTQNRQQ bmy_09873T0/1-243 -GELPAVNSS VGSNCCTCNC QSTLQAILQE LKTMRKLMQI QAAGTQNRQQ BACU013811/1-358 -GELPVVNSS VGSNCCTCNC QSTLQAILQE LKTMRKLMQI QAVGTQNRQQ ENSTTRP00000010540/1-485 -GELPVVNSS VGSNCCTCNC QSTLQAILQE LKAMRKLMQI QAVGTQNRQQ 201 250 ENSP00000345773/1-468 PPISLICSQR TAVSRKRNKK KKVPPKTVEP LTVKQKPSGS EMEKKSVVAS ENSBTAP00000027718/1-386 PPISLICSQR TAVSRKRNKK KKVPPKTVEP LTVKQKPSAL EAEKKAAGAP bmy_09873T0/1-243 PPISLICSQR TAVSRKRNKK KKVPLKTVEP LTVKQKPSAL EAEKKAVAAP BACU013811/1-358 PPISLICSQR TAVSRKRNKK KKVPLKTVEP LTVKQKPSAL EAEKKAVVAP ENSTTRP00000010540/1-485 PPISLICSQR TAVSRKRNKK KKVPLKTVEP LTVKQKPSAL EAEKKAVAAP 251 300 ENSP00000345773/1-468 ELSALQAAEH TSPEESRVLG FGIVLESPSS DPEVQLAEGF DVFMPKSQLD ENSBTAP00000027718/1-386 ENSSLPVAEH ASPGESHILG FGIVLESPAS DPEVQLAEGF DVFMPKSQLD bmy_09873T0/1-243 ENPSLPSAEH TSPRENHILG FGIVLESPAS DMQATLL--- ---------- BACU013811/1-358 ENPSLPSAEH ASPRENHILG FGIVLESPAS DPEVQLAEGF DVFMPKSQLD ENSTTRP00000010540/1-485 ENPSLPSAEH TSPRENHILG FGIVLESPAS DPEVQLAEGF DVFMPKSQLD 301 350 ENSP00000345773/1-468 SILSNYTRSG SLLFRKLVCA FFDDKTLANS LPNGKRKRGL NDNRKGLDQN ENSBTAP00000027718/1-386 SILSNYTRSG SLLFRKLVCA FFDDKTLANS LPNGKRKRGL NDNRKGLDQN bmy_09873T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU013811/1-358 SILSNYTRSG SLLFRKLVCA FFDDKTLANS LPNGKRKRGL NDNRKGLDQN ENSTTRP00000010540/1-485 SILSNYTRSG SLLFRKLVCA FFDDKTLANS LPNGKRKRGL NDNRKGLDQN 351 400 ENSP00000345773/1-468 IVGAIKVFTE KYCTANHVDK LPGPRDWVQI LQDQIKLARR RLKRGSAEIA ENSBTAP00000027718/1-386 IVGAIKVFTE KYCTANHVDK LPGPRDWVQI LQDQIKLARR RLKRGSAEAV bmy_09873T0/1-243 ---------- ---------- ---------- ----IKLQCR AIESA----- BACU013811/1-358 IVGAIKVFTE KYCTANHVDK LPGPRDWVQI LQDQIKLARR RLKRGS---- ENSTTRP00000010540/1-485 IVGAIKVFTE KYCTANHVDK LPGPRDWVQI LQDQIKLARR RLKRGS-EAA 401 450 ENSP00000345773/1-468 DSDERLDGIA LPPTGACGGP CTVLPGGSAA VTLVLQSSPQ TMSQEKGQMA ENSBTAP00000027718/1-386 DGDERLDSVS LTPTGH---- ---------- ---------- ---------- bmy_09873T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU013811/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010540/1-485 DGDERLDCVS LPPTGGHGLP GTV------- ---------- ---------- 451 500 ENSP00000345773/1-468 EPWEEQHLVL LNNLTRDRAE TGALSQT--S QDFKHHSFLI TQVSATLHHQ ENSBTAP00000027718/1-386 ---------I LDTRREKPED TGTAFTA--- ---------- ---------- bmy_09873T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU013811/1-358 ---------G MNKLQENNCR SA-------- ----LSNF-- ---------- ENSTTRP00000010540/1-485 ---GRSTAVS LEFLNEEGTE TGALSQARVD QDLKLHSFRI IQVTKRHHHR 501 550 ENSP00000345773/1-468 RGIRNFPTPG SAKSLTLHIS CLSL ENSBTAP00000027718/1-386 ---------- ---------- ---- bmy_09873T0/1-243 ---------- ---------- ---- BACU013811/1-358 ---------- ---------- ---- ENSTTRP00000010540/1-485 AHTPPVSAKS FPLWVTYHT- ----