KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:48 2014 Check: 00 .. Name: ENSP00000276893/1-802 Len: 804 Check: 7911 Weight: 1.00 Name: ENSTTRP00000007031/1-799 Len: 804 Check: 1857 Weight: 1.00 Name: BACU011674/1-769 Len: 804 Check: 4286 Weight: 1.00 Name: ENSBTAP00000027737/1-752 Len: 804 Check: 5815 Weight: 1.00 Name: bmy_03017T0/1-532 Len: 804 Check: 5073 Weight: 1.00 // 1 50 ENSP00000276893/1-802 MWIQVRTIDG SKTCTIEDVS RKATIEELRE RVWALFDVRP ECQRLFYRGK ENSTTRP00000007031/1-799 --IQVRTIDG SQTRTIEDVS RKATIEELRE RVWALFDVRP ECQRLFYRGK BACU011674/1-769 MWIQVRTIDG SQTRTIEDVS RKATIEELRE RVWALFDVRP ECQRLFYRGK ENSBTAP00000027737/1-752 ---------- ---------- ---------- ---------- ---------- bmy_03017T0/1-532 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000276893/1-802 QLENGYTLFD YDVGLNDIIQ LLVRPDPDHL PGTS--TQIE AKPCSNSPPK ENSTTRP00000007031/1-799 QLENGYTLFD YDVGLNDIIQ LLVRPDPD-L PSTSKQTDVQ AKPCSNSPPK BACU011674/1-769 QLENGYTLFD YDVGLNDIIQ LLVRPDPD-L PSTSKQTDVQ AKPCSKSPPK ENSBTAP00000027737/1-752 QLENGYTLFD YDVGLNDIIQ LLVRPDPD-L PSTSKQTDTQ AKPYSNSPPK bmy_03017T0/1-532 ---------- ---------- ---------- ---------- ---------M 101 150 ENSP00000276893/1-802 VKKAPRVGPS NQPSTSARAR LIDPGFGIYK VNELVDARDV GLGAWFEAHI ENSTTRP00000007031/1-799 VKKTPRVGPS GQPSTSTRDF LIDPGIGLYK VNELVDARXX XXXXXXXXXX BACU011674/1-769 VKKTPRVGPS GQPSTSTHDF LIDPGIGLYK VNELVDARDV ALGAWFEARI ENSBTAP00000027737/1-752 VKKTPRVGPS SQPSTSTRDF LIDPGIGLYK VNELVDARDV ALGAWFEARI bmy_03017T0/1-532 QSKLSRTGTA KT-------- ---------- ---------- ---------- 151 200 ENSP00000276893/1-802 HSVTRASDGQ SRGKTPLKNG SSCKRTNGNI KHKSKENTNK LDSVPSTSNS ENSTTRP00000007031/1-799 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU011674/1-769 HSVTRASDGH SRGKTPLKNG SSYKRTNGNI NHNSKENTNK LDHVPSTSNS ENSBTAP00000027737/1-752 HSVTRASDGH SRGKTPLKNG SSCKRTNGNV NHNSKENTKK LDNVPSTSNS bmy_03017T0/1-532 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000276893/1-802 DCVAADEDVI YHIQYDEYPE SGTLEMNVKD LRPRARTILK WNELNVGDVV ENSTTRP00000007031/1-799 XXXXADEDVI -HIEYDEYPE SGTVEINVKD LRPRARTTLK WNELNVGDVV BACU011674/1-769 DSVAADEDVI YRIEYDEYPE SGTVEINVKD LRPRARTTLK WNELNVGDVV ENSBTAP00000027737/1-752 DSVAADEDVI YHIEYDEYPE SGTVEINVKD LRPRARTTLR WNELNVGDVV bmy_03017T0/1-532 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000276893/1-802 MVNYNVESPG QRGFWFDAEI TTLKTISRTK KELRVKIFLG GSEGTLNDCK ENSTTRP00000007031/1-799 MVNYNVESPS NRGFWFDAEI TTLKTISRTK KELRVTVFLG GSEGKLNDCQ BACU011674/1-769 MVNYNVESPS NRGFWFDAEI TTLKTISRTK KELRVTVFLG GSEGKLNDCQ ENSBTAP00000027737/1-752 MVNYNVESPS NRGFWFDAEI TTLKTISRTK KELRVTVFLG GSEGKLNDCQ bmy_03017T0/1-532 ---------- ---------- ---------- KEKRVQ---- GSEGKLNDCQ 301 350 ENSP00000276893/1-802 IISVDEIFKI ERPGAHPLSF ADGKFLRRND PECDLCGGDP EKKCHSCSCR ENSTTRP00000007031/1-799 IRFINEIFKI EKPGAHPLSL ADGKFLRKND PECDFCGGDP NKKCRSCSCH BACU011674/1-769 IRFINEIFKI EKPGAHPLSL ADGKFLRKND PECDFCGGDP NKKCRSCSCH ENSBTAP00000027737/1-752 IRFINEIFKI EKPGAHPLSL ADGKFLRKND PECDSCGGDP NKKCRSCSCH bmy_03017T0/1-532 IRFINEIFKI EKPGAHPLSL ADGKFLRKND PECDFCGGDP NKTCRSCSCH 351 400 ENSP00000276893/1-802 VCGGKHEPNM QLLCDECNVA YHIYCLNPPL DKVPEEEYWY CPSCKTDSSE ENSTTRP00000007031/1-799 ICGGKQEPNM QVLCDECNMA YHIYCLNPPL DKIPEEEYWY CPSCKTDSSE BACU011674/1-769 ICGGKQEPNM QVLCDECNMA YHIYCLNPPL DKVPEEEYWY CPSCKTDSSE ENSBTAP00000027737/1-752 VCGGKQEPNM QVLCDECNMA YHIYCLNPPL DKVPEEEYWY CPSCKTDSSE bmy_03017T0/1-532 ICGGKQEPNM QVLCDECNMA YHIYCLNPPL DKVPEEEYWY CPSCKTDSSE 401 450 ENSP00000276893/1-802 VVKAGERLKM SKKKAKMPSA STESRRDWGR GMACVGRTRE CTIVPSNHYG ENSTTRP00000007031/1-799 VVKAGERLKM SKKKAKMPSA STESRRDWGR GMACVGRTRE CTIVPSNHYG BACU011674/1-769 VVKAGERLKM SKKKAKMPSA STESRRDWGR GMACVGRTRE CTIVPSNHYG ENSBTAP00000027737/1-752 VVKAGERLKM SKKKAKMPSA STESRRDWGR GMACVGRTRE CTIVPSNHYG bmy_03017T0/1-532 VVKAGERLKM SKKKAKMPSA STESRRDWGR GMACVGRTRE CTIVPSNHYG 451 500 ENSP00000276893/1-802 PIPGIPVGST WRFRVQVSEA GVHRPHVGGI HGRSNDGAYS LVLAGGFADE ENSTTRP00000007031/1-799 PIPGIPVGST WRFRVQVSEA GVHRPHVGGI HGRSNDGAYS LVLAGGFADE BACU011674/1-769 PIPGIPVGST WRFRVQVSEA GVHRPHVGGI HGRSNDGAYS LVLAGGFADE ENSBTAP00000027737/1-752 PIPGVPVGST WRFRVQVSEA GVHRPHVGGI HGRSNDGAYS LVLAGGFADE bmy_03017T0/1-532 PIPGIPVGST WRFRVQVSEA GVHRPHVGGI HGRSNDGAYS LVLAGGFADE 501 550 ENSP00000276893/1-802 VDRGDEFTYT GSGGKNLAGN KRIGAPSADQ TLTNMNRALA LNCDAPLDDK ENSTTRP00000007031/1-799 VDRGDEFTYT GSGGKNLAGN KRIGAPSADQ TLTNMNRALA LNCDAPLDDK BACU011674/1-769 VDRGDEFTYT GSGGKNLAGN KRIGAPSADQ TLTNMNRALA LNCDAPLDDK ENSBTAP00000027737/1-752 VDRGDEFTYT GSGGKNLAGN KRIGAPSADQ TLTNMNRALA LNCDAPLDDK bmy_03017T0/1-532 VDRGDEFTYT GSGGKNLAGN KRIGAPSADQ TLTNMNRALA LNCDAPLDDK 551 600 ENSP00000276893/1-802 IGAESRNWRA GKPVRVIRSF KGRKISKYAP EEGNRYDGIY KVVKYWPEIS ENSTTRP00000007031/1-799 IGAESRNWRA GKPVRVIRSF KGRKISKYAP EEGNRYDGIY KVVKYWPEIS BACU011674/1-769 IGAESRNWRA GKPVRVIRSF KGRKISKYAP EEGNRYDGIY KVVKYWPEIS ENSBTAP00000027737/1-752 IGAESRNWRA GKPVRVIRSF KGRKISKYAP EEGNRYDGIY KVVKYWPEIS bmy_03017T0/1-532 IGAESRNWRA GKPVRVIRSF KGRKISKYAP EEGNRYDGIY KVVKYWPEIS 601 650 ENSP00000276893/1-802 SSHGFLVWRY LLRRDDVEPA PWTSEGIERS RRLCLRLQYP AGYPSDKEGK ENSTTRP00000007031/1-799 SSHGFLVWRY LLRRDDVEPA PWTSEGIERS RRLCLRLQYP VGYPSDKEGK BACU011674/1-769 SSHGFLVWRY LLRRDDVEPA PWTSEGIERS RRLCLRLQYP VGYPSDKEGK ENSBTAP00000027737/1-752 SSHGFLVWRY LLRRDDVEPA PWTSEGIERS RRLCLRLQYP VGYPSDKEGK bmy_03017T0/1-532 SSHGFLVWRY LLRRDDVEPA PWTSEGIERS RRLCLRLQYP VGYPSDKEGK 651 700 ENSP00000276893/1-802 KPKGQSKKQP SGTTKRPISD DDCPSASKVY KASDSAEAIE AFQLTPQQQH ENSTTRP00000007031/1-799 KTKGQSKK-A SGAPKRPSTD DDCPSASKVP KASDSAEAVE AFQLTPQQQH BACU011674/1-769 KTKGQSKK-A SGASKRPSTD DDCPSASKVL KASDSGEAVE AFQLTPQQQH ENSBTAP00000027737/1-752 KTKGQSKK-A RGTSKRPSAD DDCPSASKVL KPSDSAEAVE AFQLTPQQQH bmy_03017T0/1-532 KTKGQSKK-A SGASKRPSTD DDCPSASKVL KASDSAEAVE AFQLTPQQQH 701 750 ENSP00000276893/1-802 LIREDCQNQK LWDEVLSHLV EGPNFLKKLE QSFMCVCCQE LVYQPVTTEC ENSTTRP00000007031/1-799 LIREDHQNQK LWDEVLASLV EGPNFLKKLE QSFMCVCCQE LVYQPVTTDC BACU011674/1-769 LIREDHQNQK LWDEVLASLV EGP------- ---------- ---------- ENSBTAP00000027737/1-752 LIREDHQNQK LWDEVLASLV EGPNFLKKLE QSFMCVCCQE LVYQPVTTDC bmy_03017T0/1-532 LIREDHQNQK LWDEVLASLV EGPNFLKKLE QSFMCVCCQE LVYQPVTTDC 751 800 ENSP00000276893/1-802 FHNVCKDCLQ RSFKAQVFSC PACRHDLGQN YIMIPNEILQ TLLDLFFPGY ENSTTRP00000007031/1-799 LHNVCKDCLQ RSFKAQVFSC PACRHDLGQN YIMIPNEVLQ TLLDLFFPGY BACU011674/1-769 ------DCLQ RSFKAQVFSC PACRHDLGQD YIMIPNEVLQ TLLDLFFPGY ENSBTAP00000027737/1-752 LHNVCKDCLQ RSFKAQVFSC PACRHDLGQN YIMIPNAVLQ TLLDLFFPGY bmy_03017T0/1-532 LHNVCKDCLQ RSFKAQVFSC PACRHDLGQN YIMIPNEVLQ TLLDLFFPGY 801 850 ENSP00000276893/1-802 SKGR ENSTTRP00000007031/1-799 SKGR BACU011674/1-769 SKGR ENSBTAP00000027737/1-752 SKGR bmy_03017T0/1-532 SKGR