KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:33:49 2014 Check: 00 .. Name: bmy_13568T0/1-457 Len: 543 Check: 8995 Weight: 1.00 Name: ENSTTRP00000013158/1-489 Len: 543 Check: 9055 Weight: 1.00 Name: ENSP00000264651/1-525 Len: 543 Check: 848 Weight: 1.00 Name: ENSBTAP00000027749/1-481 Len: 543 Check: 6158 Weight: 1.00 // 1 50 bmy_13568T0/1-457 TPCLAHL--- ---------- ---------- ---------- --------AC ENSTTRP00000013158/1-489 MSCSSLVSSS RAGG------ ----SSFSSR SRCSLGGGSA RGFRGGAGSC ENSP00000264651/1-525 MSCSSRASSS RAGGSSSARV SAGGSSFSSG SRCGLGGSSA QGFRGGASSC ENSBTAP00000027749/1-481 ---------- ---------- ---------- ---------- -GFRGGAGSY 51 100 bmy_13568T0/1-457 PPPGLVAAAE AAEADAVWGE ALPGDSEEGP AAGAV----- ---------- ENSTTRP00000013158/1-489 GLSGGSSKGS GGSFGGSFGS CSIGGGLGGA SGSGIG---- ---------- ENSP00000264651/1-525 SLSGGSSGAF GGSFGGGFGS CSVGGGFGGA SGSGTG---- --------FG ENSBTAP00000027749/1-481 GLSGGSSGG- ---FGGGFGS CSVGGGFGGA SGSGIGFGGG SSFGGGSSFG 101 150 bmy_13568T0/1-457 ----WEELQA LGL--ALVEV LDSAGGASGG FYSY----GG GMGGGVGHGG ENSTTRP00000013158/1-489 ----FGGGAG FGR------- ------TSGG FYSY----AG GMGGGVGHGG ENSP00000264651/1-525 GGSSFGGVSG FGRGSGFCGS SRFSSGATGG FYSY----GG GMGGGVGDGG ENSBTAP00000027749/1-481 GGSSFGGGSS FGGGSGFGGS AGYAGGASGG FYSYAGGVGG GVGGGLGDGG 151 200 bmy_13568T0/1-457 LFSGGEKQTM QNLNDWLANY LDKVRALEEA KADLENKIKE WYDKFGPGSG ENSTTRP00000013158/1-489 LFSGGEKQTM QNLSDWLANH LDKVRALEKA --DLENKIKE WYDKFGPGSG ENSP00000264651/1-525 LFSGGEKQTM QNLNDRLANY LDKVRALEEA NTDLENKIKE WYDKYGPGSG ENSBTAP00000027749/1-481 LFSGGEKQAM QNLNDRLANY LDKVRALEEA NADLENKIKE WYEKFGPRSG 201 250 bmy_13568T0/1-457 DGGAGRDYSK YYPIIEDLRN QILTATIENA GIVLQIDNAR LTADDFRLKY ENSTTRP00000013158/1-489 VGGAGRDYSK YYPIIEDLRN QILTATLENA GIVLQIDNAR LTADDFRLKY ENSP00000264651/1-525 DGGSGRDYSK YYSIIEDLRN QIIAATVENA GIILHIDNAR LAADDFRLKY ENSBTAP00000027749/1-481 DGGAGRDYSK YYPVIEDVRT QIITATIENA GIVLQIDNAR LAADDFRLKY 251 300 bmy_13568T0/1-457 KNKLHLRQTV EADINGLRKV LDDLTMTRSD LEMQIESLTE ELAFLKKNHQ ENSTTRP00000013158/1-489 KNELHLRQPV EADINGLQKV LDDLTMTRSD LEMQTESLTE ELAYLKKNHQ ENSP00000264651/1-525 ENELCLRQSV EADINGLRKV LDDLTMTRSD LEMQIESFTE ELAYLRKNHE ENSBTAP00000027749/1-481 ENELHLRQTV EADINGLRKV LDDLTMTRSD LEMQIESLTE ELAYLKKNHE 301 350 bmy_13568T0/1-457 EEMKSMQGSS GGDVTVELN- -PGTDLTKLL NDXRAQYGEL AEQNRREAEE ENSTTRP00000013158/1-489 EEMKSMQRSS GG-VTVELN- -PGTD--KLL NDVRAQYEDL AEQNHCEAEG ENSP00000264651/1-525 EEMKNMQGSS GGEVTVEMNA APGTDLTKLL NDMRAQYEEL AEQNRREAEE ENSBTAP00000027749/1-481 EEMKSMQGSS RGDVTVEMNA APGTDLTKLL NDMRAQYEEL AEQNRREAEE 351 400 bmy_13568T0/1-457 QFNEQSASLQ AQISTDADAR SASSTKNEIT ELKRTLQALE IELQSQLAMK ENSTTRP00000013158/1-489 QFNEQSASLQ AQISTDAGAR PASSTKNEIT ELKRTLQALE IELQSQLAVK ENSP00000264651/1-525 RFNKQSASLQ AQISTDAGA- -ATSAKNEIT ELKRTLQALE IELQSQLAMK ENSBTAP00000027749/1-481 QFNKQSASLQ AQISTDAGA- -ANSAKNEIT ELKRTLQALE IELQSQLAMK 401 450 bmy_13568T0/1-457 SSLEGTLADT EAGYMAQL-- -------LEE QICQIRGETE CQNTEYEQLL ENSTTRP00000013158/1-489 SSLEGTLADT EAGYMVQLSQ IQMQISGLEE HICQIWSETE RQNTEYEQLL ENSP00000264651/1-525 SSLEGTLADT EAGYVAQLSE IQTQISALEE EICQIWGETK CQNAEYKQLL ENSBTAP00000027749/1-481 SSLEGTLADT EANYMVQLSQ IQMQISSLEE QICQIRGETE CQNAEYEQLL 451 500 bmy_13568T0/1-457 DIKTRLEMEI DTYHRLLDGE GGGSGFGGSD FRNSGSETRG PETPDPGIHP ENSTTRP00000013158/1-489 DIKTRLEMEI DPYHCLLDGE GGGSGFGGSD FRNSGS-NTG SRDPVSSDSR ENSP00000264651/1-525 DIKTRLEVEI ETYRRLLDGE GGGSSFAEFG GRNSGSVNMG SRDLVSGDSR ENSBTAP00000027749/1-481 DIKTRLEMEI ETYRRLLDGE GG-------- -------NMG SRDSSMSDGS 501 550 bmy_13568T0/1-457 Y--------- PSKTRVTKTI VEEVVDGKVV SSQVSNVSEV KLK ENSTTRP00000013158/1-489 SGSCSVQGRD PS-TRVTKTI VAEVVDGKVV SSQVSNVSEV KLK ENSP00000264651/1-525 SGSCSGQGRD SSKTRVTKTI VEELVDGKVV SSQVSSISEV KVK ENSBTAP00000027749/1-481 RSGTSVQGRD PSKSRVTKTI VEEVVDGKVI SSQVSNVSEV KLK