KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:49 2014 Check: 00 .. Name: bmy_17396T0/1-179 Len: 314 Check: 4904 Weight: 1.00 Name: ENSBTAP00000027750/1-226 Len: 314 Check: 2603 Weight: 1.00 Name: ENSP00000358956/1-260 Len: 314 Check: 1553 Weight: 1.00 Name: BACU002032/1-187 Len: 314 Check: 34 Weight: 1.00 Name: ENSTTRP00000001323/1-260 Len: 314 Check: 1833 Weight: 1.00 // 1 50 bmy_17396T0/1-179 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027750/1-226 MSLQQTPQSR VFVELLPWAD RGRENYLLSG GETLPGLRRP LSSAPAQTPT ENSP00000358956/1-260 MSLQKTPPTR VFVELVPWAD RSRENNLASG RETLPGLRHP LSSTQAQTAT BACU002032/1-187 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001323/1-260 MSGQQAPQSR VFVELVPWAD RGRENYLLSG GETLPGLRRP LSSAQTQTAT 51 100 bmy_17396T0/1-179 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027750/1-226 REVHVSGTAE VSASPDRAQV VVRVSSTKEA AAEAKKSVCR RLDYITQSLR ENSP00000358956/1-260 REVQVSGTSE VSAGPDRAQV VVRVSSTKEA AAEAKKSVCR RLDYITQSLQ BACU002032/1-187 ---------- ---------- ---MSSTKEA AAEAKKSVCR RLDYVTQTLQ ENSTTRP00000001323/1-260 REVHVSGTAE VSATPDRAQV VVQMSSTKEA AAEAKKSVCR RLDYITQTLQ 101 150 bmy_17396T0/1-179 ---------- ---------- ---MEAEVCI TFTEFGKMQN ICNFLVEKLD ENSBTAP00000027750/1-226 QQGVQSENVT VTKDFKRLEN AYHMEAEVCI TFTEFGKMQN ICNFLVEKLD ENSP00000358956/1-260 QQGVQAENIT VTKDFRRVEN AYHMEAEVCI TFTEFGKMQN ICNFLVEKLD BACU002032/1-187 QQGMQSENVT VTKDFQRVEN AYHMEAEVCI TFTEFGKMQN ICNFLVEKLD ENSTTRP00000001323/1-260 QQGVQSENVT VTKDFQRVEN AYHMEAEVCI TFTEFGKMQN ICNFLVEKLD 151 200 bmy_17396T0/1-179 SSVVISQPQF YHTPGSIENL RQIVSNSHKI SCGLNHFNMF SYVKRLELTV ENSBTAP00000027750/1-226 SSVVISQPQF YHMPGSIDNL R-------RQ ACLAAVENAR ---RKAQEVC ENSP00000358956/1-260 SSVVISPPQF YHTPGSVENL R-------RQ ACLVAVENAW ---RKAQEVC BACU002032/1-187 SSVVISQPHF YHTPGSIENL R-------RQ ACLVAVENAW ---RKAQEVC ENSTTRP00000001323/1-260 SSVVISQPQF YHTPGSIENL R-------RQ ACVVAVENAW ---RKAQEVC 201 250 bmy_17396T0/1-179 AYPSQTLLRQ GDILFQPLSG ALASVSQPKV LPNSHVTYGC SPVPSQNEQM ENSBTAP00000027750/1-226 NLVGQTLGK- ---------- ---------- ---------- -PLIIKEEET ENSP00000358956/1-260 NLVGQTLGK- ---------- ---------- ---------- -PLLIKEEET BACU002032/1-187 NLVGQTLGK- ---------- ---------- ---------- -PLLIKEEEM ENSTTRP00000001323/1-260 NLVGQTLGK- ---------- ---------- ---------- -PLLIKEEEM 251 300 bmy_17396T0/1-179 LALDFKSMFI VIPFKKSECN DSDKSSLAQL NTCKESIDFF FIVPIPKMIK ENSBTAP00000027750/1-226 KEWE------ ------GQID DPQSSRLQ-- ---------- -VH------- ENSP00000358956/1-260 KEWE------ ------GQID DHQSSRLSSS LTVQQKIKSA TIHAASKVFI BACU002032/1-187 KEWE------ ------GQID DHQSSRLSSS LTVQQKIKSA TIHAACKVFI ENSTTRP00000001323/1-260 KEWE------ ------GQID DHQSSRLSGS LTVQQKIKSA TIHAASKVFV 301 350 bmy_17396T0/1-179 MQ-------- ---- ENSBTAP00000027750/1-226 ---------- ---- ENSP00000358956/1-260 TFEVKGKEKR KKHL BACU002032/1-187 TFEVKGREKK KNRI ENSTTRP00000001323/1-260 TFEVKGREKK KKHT