KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:33:50 2014 Check: 00 .. Name: ENSP00000367629/1-709 Len: 744 Check: 1292 Weight: 1.00 Name: ENSTTRP00000003219/1-705 Len: 744 Check: 2543 Weight: 1.00 Name: bmy_16881T0/1-642 Len: 744 Check: 3289 Weight: 1.00 Name: ENSBTAP00000027769/1-708 Len: 744 Check: 7226 Weight: 1.00 // 1 50 ENSP00000367629/1-709 MAQRHSDSSL EEKLLGHRFH SELRLDAGGN PASGLPMVRG SPRVRDDAAF ENSTTRP00000003219/1-705 MSQQHSDSSL EEKLLEHRFH SELQLDTEGN PASRLPMVRG PLQSRSNAAF bmy_16881T0/1-642 MSQQHSDSSL EEELLEYRFH SELQLDTKGN PASGLPMVRG SLQSRSNAAF ENSBTAP00000027769/1-708 MSQRYSDSSV EEKLLEYRFH SELRLDAKGN PASGLPVVRG SLHSGSNAAF 51 100 ENSP00000367629/1-709 QPQVPAPPQP RPPGHEEPWP IVLSTESPAA LKLGTQQLIP KSLAVASKAK ENSTTRP00000003219/1-705 QPDTPVPPSP LRP---EPRT IVLSTQSPAA LKMGTQQLIP RSLAVSSKAK bmy_16881T0/1-642 QPDSPVPPSP -SPEAQELRT IVLSTQSPAA LKMGTQQLIP RSLAVSSKAK ENSBTAP00000027769/1-708 QPDTPAPPEP -APESQEPRT VILSTQSPAA LKMGTQQLIP RSLAVSSKAK 101 150 ENSP00000367629/1-709 TPARHQSFGA AVLSREAARR DPKLLPAPSF SLDDMDVDKD PGGMLRRNLR ENSTTRP00000003219/1-705 TPARHQSFGA AMLSKEAARR DPRLLPAPSF SLDDMDVDTG PGGMLRRNLR bmy_16881T0/1-642 TPARHQSFGA AMLSKEAARR DPRLLSAPSF SLDDMDVDTG PGGMLRRNLR ENSBTAP00000027769/1-708 TPARHQSFGA AMLSKEAARR NPQLLSAPSF SLDDMDLDTG PGGMLKRNLR 151 200 ENSP00000367629/1-709 NQSYRAAMKG LGKPGGQGDA IQLSPKLQAL AEEPSQPHTR SPAKNKKTLG ENSTTRP00000003219/1-705 NQSYRAAMKG LGTPSGEGGP VQLSPKIRAL TEEPSQPPAR STARNKKTLG bmy_16881T0/1-642 NQSYRAAMKG LGTPGGEGGP VQLSPKIPAL AEEPSQPPAR SAAKNKKTLG ENSBTAP00000027769/1-708 NQSYRAAMKG LGTPGGEGGP IQLTPKLQAL AEEPSQPPAR PAAKNKKTLG 201 250 ENSP00000367629/1-709 RKRGHKGSFK DDPQLYQEIQ ERGLNTSQES DDDILDESSS PEGTQKVDAT ENSTTRP00000003219/1-705 RKRAHKGSFK DDPRFYQEIR ERGLNTIHES DDDLLDESSS PEETQKADAC bmy_16881T0/1-642 RKRAHKGSFK DDPRFYQEIQ ERGLNTSHES DDDLLDESSS PDGTRKVDAH ENSBTAP00000027769/1-708 RKRAHKGSFK DDPRLYQEIR ERGLNTSHES DDDLLDEPPS PEGTRKVDAP 251 300 ENSP00000367629/1-709 IVVKSYRPAQ VTWSQLPEVV ELGILDQLST EERKRQEAMF EILTSEFSYQ ENSTTRP00000003219/1-705 IVVKSYRPPQ VTWSQLPEVV ESGILDKLPA EEHERQEAIF EILISEFSYQ bmy_16881T0/1-642 IVVKSYRPPQ VTWSQLPEVV ESGILDKLPA EEHKRQEAIF EILTSEYSYQ ENSBTAP00000027769/1-708 IVVKSYRPPQ ITWSQLPEVV ESGILDQLPA EERKRQEAIF EILTSEFSYQ 301 350 ENSP00000367629/1-709 HSLSILVEEF LQSKELRATV TQMEHHHLFS NILDVLGASQ RFFEDLEQRH ENSTTRP00000003219/1-705 HSLGILVAEF LQSRELRATM TQTEHHHLFS NITDVLSASQ RFFEDLEKRH bmy_16881T0/1-642 HSLGILVAEF LQSPELRATM TQTEHHHLFS NITDVLSASR R--------- ENSBTAP00000027769/1-708 HSLGILVAEF LQSRALRATM TQMEHHHLFS NITDVLSASQ RFFEDLERRH 351 400 ENSP00000367629/1-709 KAQVLVEDIS DILEEHAEKH FHPYIAYCSN EVYQQRTLQK LISSNAAFRE ENSTTRP00000003219/1-705 RAQVCVEDVS DILEEHAERH FHPYVSYCSN EVYQQRALQQ LTSSSAAFRE bmy_16881T0/1-642 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027769/1-708 KAQVCVEDIS DILEEHAEHH FHPYISYCSN EVYQQRALQR LTNSNATFRE 401 450 ENSP00000367629/1-709 ALREIERRPA CGGLPMLSFL ILPMQRVTRL PLLMDTLCLK TQGHSERYKA ENSTTRP00000003219/1-705 ALREIEQRPA CGGLPMISFL ILPMQRVTRL PLLTDTLCLK TQGHPERYKA bmy_16881T0/1-642 ---------- ---------- ---------- ---------- SGPGPARRPG ENSBTAP00000027769/1-708 ALRAIEQRPA CGGLPMISFL ILPMQRVTRL PLLTDTLCLK TQGHPERYKA 451 500 ENSP00000367629/1-709 ASRALKAISK LVRQCNEGAH RMERMEQMYT LHTQLDFSKV K--------- ENSTTRP00000003219/1-705 ASRALKAISK LVKQCNEGAH RMERMEQMYT LHTQLDFSKV K--------- bmy_16881T0/1-642 TRR--RRLSR LVKQCNEGAH KMERTEQMYT LHTQLDFSKV KPREAWAPRS ENSBTAP00000027769/1-708 ASRALKAISK LVKQCNEGAH KMERTEQMYT LHTQLDFSKV K--------- 501 550 ENSP00000367629/1-709 ---------- ---------- ------SLPL ISASRWLLKR GELFLVEETG ENSTTRP00000003219/1-705 ---------- ---------- ------XXXX XXXXXXXXXX XXXXXXXXXG bmy_16881T0/1-642 QRQGSVPVAA HPGHPPGLIP VPALPQSLPL ISASRWLLKR GELFVVEETG ENSBTAP00000027769/1-708 ---------- ---------- ------SLPL ISASRWLLKR GELFVVEETG 551 600 ENSP00000367629/1-709 LFRKIASRPT CYLFLFNDVL VVTKKKSEES YMVQDYAQMN HIQVEKIEPS ENSTTRP00000003219/1-705 LSGNSACRRT CY-FLFNDVL VVTKKKSEDS FVVQDYAQLD HIQVQKMEPS bmy_16881T0/1-642 LFRKLASRPT CYLFLFNDVL VVTKKKSEDS FVVQDYAQLD HIQVQKIEAS ENSBTAP00000027769/1-708 LFRKLASRPT CYLFLFNDVL VVTKRKSEDS FMVQDYAQVD HIQVQKMEPS 601 650 ENSP00000367629/1-709 ELPLPGGGNR SSSVPHPFQV TLLRNSEGRQ EQLLLSSDSA SDRARWIVAL ENSTTRP00000003219/1-705 EASLPGGGNR SSFVPHTFQL TLLHNSEGRQ EKILLSSDSA SDRARWITAL bmy_16881T0/1-642 EASLPGGGNR SSFVPYAFQL TLLHNSEGRQ GKILLSSDSA SDRARWITAL ENSBTAP00000027769/1-708 EASLPGGGNR GSSVPHPFQL ILLHNSEGRQ EKILLSCDSA SDRARWITAL 651 700 ENSP00000367629/1-709 THSERQWQGL SSKGDLPQVE ITKAFFAKQA DEVTLQQADV VLVLQQEDGW ENSTTRP00000003219/1-705 THWERRQPDP TNKGDLLQVE ITKAYLAKQA DEITLQQADV VLVLEQEDGW bmy_16881T0/1-642 THWERQRLGP TNKGDLLQVE ITKAYLAKQV DEITLQQADV VLILEQEDGW ENSBTAP00000027769/1-708 TQRERQARGP PNKGDLLQVE ITKAYLAKQV DEITLQQADV VLILEQEDGW 701 750 ENSP00000367629/1-709 LYGERLRDGE TGWFPEDFAR FITSRVAVEG NVRRMERLRV ETDV ENSTTRP00000003219/1-705 LYGERLRDGE TGWFPEDLAR SITSRVAVEG NMRRMERLRV ETDV bmy_16881T0/1-642 FYGERLRDGE TGWFPEDLAR SITSRVAVEG NMRRMERLRV ETGV ENSBTAP00000027769/1-708 LYGERLRDGE TGWFPEDFAR SITSRVAVEG NVRRMERLRV ETDV