KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:54 2014 Check: 00 .. Name: ENSP00000293805/1-479 Len: 480 Check: 2943 Weight: 1.00 Name: ENSBTAP00000027787/1-473 Len: 480 Check: 1666 Weight: 1.00 Name: bmy_01777T0/1-476 Len: 480 Check: 5603 Weight: 1.00 Name: BACU001273/1-476 Len: 480 Check: 4396 Weight: 1.00 Name: ENSTTRP00000003751/1-432 Len: 480 Check: 5391 Weight: 1.00 // 1 50 ENSP00000293805/1-479 MGSPAAPEGA LGYVREFTRH SSDVLGNLNE LRLRGILTDV TLLVGGQPLR ENSBTAP00000027787/1-473 MGSTATPEGA LGYVREFTRH SSDVLGNLNE LRLRGILTDV TLLVGGQPLR bmy_01777T0/1-476 MGSTAAPEGT LGYVREFTRH SSDVLGNLNE LRLRGILTDV TLLVGGQPLR BACU001273/1-476 MGSTAAPEGT LGYVREFTRH SSDVLGNLNE LRLRGILTDV TLLVGGQPLR ENSTTRP00000003751/1-432 ---------- ---------- ---------- ---------- -LLVGGQPLR 51 100 ENSP00000293805/1-479 AHKAVLIACS GFFYSIFRGR AGVGVDVLSL PGGPEARGFA PLLDFMYTSR ENSBTAP00000027787/1-473 AHKAVLIACS GFFYSIFRGR AGVGVDMLSL PGGPEAGGFA PLLDFMYTSR bmy_01777T0/1-476 AHKAVLIACS GFFYSIFRGR AGVGVDVLSL PGGPEAGGFA PLLDFMYTSR BACU001273/1-476 AHKAVLIACS GFFYSIFRGR AGVGVDVLSL PGGPEAGGFA PLLDFMYTSR ENSTTRP00000003751/1-432 AHKAVLIACS GFFYSIFRGR AGVGVDVLSL PGGPEAGGFA PLLDFMYTSR 101 150 ENSP00000293805/1-479 LRLSPATAPA VLAAATYLQM EHVVQACHRF IQASYEPLGI SLRPLEAEPP ENSBTAP00000027787/1-473 LRLSPATAPA VLAAATYLQM EHVVQACHRF IQASYEPLGI SLRPLEAEPP bmy_01777T0/1-476 LRLSPATAPA VLAAATYLQM EHVVQACHRF IQASYEPLGI SLRPLEAEPP BACU001273/1-476 LRLSPATAPA VLAAATYLQM EHVVQACHRF IQASYEPLGI SLRPLEAEPP ENSTTRP00000003751/1-432 LRLSPATAPA VLAAATYLQM EHVVQACHRF IQASYEPLGI SLRPLEAEPP 151 200 ENSP00000293805/1-479 TPPTAPPPGS PRRSEGHPDP PTESRSCSQG PPSPASPDPK ACNWKKYKYI ENSBTAP00000027787/1-473 TPPTAPPPGS PRRSEGHPDP PTESRSCSQG PPSPHSPDPK ACNWKKYKFI bmy_01777T0/1-476 TPPTAPPPGS PRRSEGHPDP PTESRSCSQG PPSPGSPDPK ACNWKKYKFI BACU001273/1-476 TPPTAPPPGS PRRSEGHPDP PTESRSCSQG PPSPGSPDPK ACNWKKYKFI ENSTTRP00000003751/1-432 TPPTAPPPGS PRRSEGHPDP PTESRSCSQG PPSPGSPDPK ACNWKKYKFI 201 250 ENSP00000293805/1-479 VLNSQASQAG SLVGERSSGQ PCPQARLPSG DEASSSSSSS SSSSEEGPIP ENSBTAP00000027787/1-473 ILNSQASQAG SLARE-SSGQ LCSQARLPSG DEA-----SS SSSSEEGPIS bmy_01777T0/1-476 VLNSQASQAG SLAGERSSGQ LCSQARLPSG DEA----SSS SSSSEEGPIS BACU001273/1-476 VLNSQASQAG SLAGERSSGQ LCSQARLPSG DEA---SSSS SSSSEEGPIS ENSTTRP00000003751/1-432 VLNSQASQAG SLAGERSSGQ LCSQARLPSG DEA-----SS SSSSEEGPIS 251 300 ENSP00000293805/1-479 GPQSRLSPTA ATVQFKCGAP ASTPYLLTSQ AQDTSGSPSE RARPLPGSEF ENSBTAP00000027787/1-473 SPQSRLSPTA ATVQFKCEAP VNTRHQLTPQ APETTGSPSG RAHPPPGGEF bmy_01777T0/1-476 GPQSRLSPTA ATVQFKCGAP VHTPHLLTPR APETTGSPSG RAHPPPGSEF BACU001273/1-476 GPQSRLSPTA ATVQFKCGAP VHTPHLLTPR APETTGSPSG RAHPPPGGEF ENSTTRP00000003751/1-432 GPQSRLSPTA ATVQFKCGAP VNTPHLLTPR APETTGSHSG RAHPPPGSEF 301 350 ENSP00000293805/1-479 FSCQNCEAVA GCSSGLDSLV PGDEDKPYKC QLCRSSFRYK GNLASHRTVH ENSBTAP00000027787/1-473 FSCQNCEAVA GCSSGLDPVA SGDEDKPYKC QLCRSAFRYK GNLASHRTVH bmy_01777T0/1-476 FSCQSCEAVA GRSSGLDPLA PGDEDKPYKC QLCRSAFRYK GNLASHRTVH BACU001273/1-476 FSCQSCEAVA GRSSGLDPLA PGDEDKPYKC QLCRSAFRYK GNLASHRTVH ENSTTRP00000003751/1-432 FSCQSCEAVA GCSSGLDPLA PGDEDKPYKC QLCRSAFRYK GNLASHRTVH 351 400 ENSP00000293805/1-479 TGEKPYHCSI CGARFNRPAN LKTHSRIHSG EKPYKCETCG SRFVQVAHLR ENSBTAP00000027787/1-473 TGEKPYHCSI CGARFNRPAN LKTHSRIHSG EKPYKCETCG SRFVQVAHLR bmy_01777T0/1-476 TGEKPYHCSV CGARFNRPAN LKTHSRIHSG EKPYKCETCG SRFVQVAHLR BACU001273/1-476 TGEKPYHCSV CGARFNRPAN LKTHSRIHSG EKPYKCETCG SRFVQVAHLR ENSTTRP00000003751/1-432 TGEKPYHCSV CGARFNRPAN LKTHSRIHSG EKPYKCETCG SRFVQVAHLR 401 450 ENSP00000293805/1-479 AHVLIHTGEK PYPCPTCGTR FRHLQTLKSH VRIHTGEKPY HCDPCGLHFR ENSBTAP00000027787/1-473 AHVLIHTGEK PYPCPTCGTR FRHLQTLKSH VRIHTGEKPY HCDPCGLHFR bmy_01777T0/1-476 AHVLIHTGEK PYPCPTCGTR FRHLQTLKSH VRIHTGEKPY HCDPCSLHFR BACU001273/1-476 AHVLIHTGEK PYPCPTCGTR FRHLQTLKSH VRIHTGEKPY HCDPCSLHFR ENSTTRP00000003751/1-432 AHVLIHTGEK PYPCPTCGTR FRH-QTLKSH VRIHTREKPY HCDPCSLHFR 451 500 ENSP00000293805/1-479 HKSQLRLHLR QKHGAATNTK VHYHILGGP- ENSBTAP00000027787/1-473 HKSQLRLHLR QKHGAATNTK VHYHILGGP- bmy_01777T0/1-476 HKSQLRLHLR QKHGAATNTK VHYHILGGPS BACU001273/1-476 HKSQLRLHLR QKHGAATNTK VHYHILGGP- ENSTTRP00000003751/1-432 HKSQLRLHLR QKHGAATNTK VHYHILGGP-