KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:54 2014 Check: 00 .. Name: ENSP00000364448/1-476 Len: 544 Check: 1397 Weight: 1.00 Name: ENSBTAP00000027791/1-510 Len: 544 Check: 909 Weight: 1.00 Name: ENSTTRP00000014608/1-477 Len: 544 Check: 1478 Weight: 1.00 Name: bmy_20567T0/1-409 Len: 544 Check: 2131 Weight: 1.00 Name: BACU017380/1-540 Len: 544 Check: 1006 Weight: 1.00 // 1 50 ENSP00000364448/1-476 MRSEKEGAGG LRAAVAARGP SGREKLSALE VQFHRDSQQQ EAETPPTSSS ENSBTAP00000027791/1-510 MRSE-DGAGG PGVAVATRGP SGREKPSSAE SQFRRESPRR EAEAPLASSS ENSTTRP00000014608/1-477 MRSQKEGEGG PGLPVTTRGP SGKEKPSPPE SHFRRESQRR EPEAPVAWSS bmy_20567T0/1-409 MRSEKEGEGG PGVAVTTRRL SGKEKPSPTE SHFRRESQRR EPEAPSNLAR BACU017380/1-540 MRSE-EGEGG PGVAVTTRGP SGKEKPSPTE SHFRRESQRR EPEAPVASSS 51 100 ENSP00000364448/1-476 GCGGGAGKPR EEKRTALSKV VIRRLPPGLT KEQLEEQLRP LPAHDYFEFF ENSBTAP00000027791/1-510 SCGSGAGKPR EEKRTVLSKV VIRRLPPSLT KEQLEQQLHP LPAHDYFEFF ENSTTRP00000014608/1-477 GCGGGAVEPR EEKRTVLSKX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_20567T0/1-409 KRGRSSA--- ---------- ---------- ---------- ---------- BACU017380/1-540 GCGGGAVKPR EEKRTVLSKV VIRRLPPSLT KEQLEEQLHP LPAHDYFGLF 101 150 ENSP00000364448/1-476 AADLSLYPHL YSRAYINFRN PDDILLFRDR FDGYIFLDS- -KGLEYPAVV ENSBTAP00000027791/1-510 TADVSLYPHL YSRAYINFRN PDDILLFRDR FDGYIFIDSK VKGLEYPAVV ENSTTRP00000014608/1-477 XXXXXLYPHL YSRAYINFRN PDDILLFRDR FDGYIFIDS- -KGLEYPAVV bmy_20567T0/1-409 ----SLYPHL YSRAYINFRN PDDILLFRDR FDGYIFIDS- -KGLEYPAVV BACU017380/1-540 TADLSLHPHL YSRAYINFRN PDDILLFRDR FDGYIFIDS- -KGLEYPAVV 151 200 ENSP00000364448/1-476 EFAPFQKIAK KKLRKKDAKT GSIEDDPEYK KFLETYCVEE EKTSANPETL ENSBTAP00000027791/1-510 EFAPFQKIAK KKLKKKDAKT GSIEDDPEYK KFLETYCVEE EKTSVSPETL ENSTTRP00000014608/1-477 EFAPFQKTAK KKLKKNDTQA GSIEDDPEYK KFLETYCVEE EKTNANAEAL bmy_20567T0/1-409 EFAPFQKTAK KKLKKKDTQA GSIEDDPEYK KFLETYCVEE EKTSANPETL BACU017380/1-540 EFAPFQKTAK KKLKKKDAQA GSIEDDPEYK KFLETYCVEE EKTSANPETL 201 250 ENSP00000364448/1-476 LGEMEAKTRE LIARRTTPLL EYIKNRKLEK QRIREEKREE RRRRELEKKR ENSBTAP00000027791/1-510 LGDIEAKTRE LIARRTTPLL EYIKNRKLEK QRIREEKREE RRRRELEKKR ENSTTRP00000014608/1-477 LGDIEAKTRG LIARRTTPLL EYIKSRKLEK QRIREEKREE RRRRELERKR bmy_20567T0/1-409 LGDIEAKTRE LIARRTTPLL EYIKNRKLEK QRIREEKREE RRRRELERKR BACU017380/1-540 LGDIEAKTRE LIARRTTPLL EYIKNRKLEK QRIREEKREE RRRRELERKH 251 300 ENSP00000364448/1-476 L--------R EEEKRRRREE ERCKKKETDK QKKIAEKEVR IKLLKKPEKG ENSBTAP00000027791/1-510 L--------R EEEKRRRREE EKCRRKAAEK QKKTAEKE-- --LLKKPEKG ENSTTRP00000014608/1-477 L--------R EEETRRRREE ERCKRRAAEK QQKTAEKEVR RKLLKKSEKG bmy_20567T0/1-409 L--------R EEEIRRRREE EKCKRKAAEK QKKTAEKEVR MKLLKKSEKG BACU017380/1-540 LREEEIRRRR EEEIRRRREE EKCKRKAAEK QKKTAEKEVR MKLLKKSEKG 301 350 ENSP00000364448/1-476 EEPTTEKPKE RGEEIDTGGG KQESCAPGAV VKARPMEGSL EEPQETSHSG ENSBTAP00000027791/1-510 EEPSTEKPKE RAEETDPGDG KWEPCPSAVV LKPKPPEGSL EELRERSQND ENSTTRP00000014608/1-477 EESSTEKPKE RGEEIDTRGG KQELGPSCVV VKPRPLESSL QELREKSEND bmy_20567T0/1-409 EESSTEKPKE RGEEIGTRDG KQEPGPSCVV MKPKPLESSL EELREK---- BACU017380/1-540 EESSTEKPKE RGEEIDTRDG KQEPGPSCVV MKPKPLESSL EELREKSQND 351 400 ENSP00000364448/1-476 SDKEHRDVER -SQEQESEAQ RYHVDDGRRH RAHHEPERLS RRSEDEQRWG ENSBTAP00000027791/1-510 SDKEQRDKER RSREKELEAQ QCHLDDSRKH RAHHELEKCS GRNGEELARG ENSTTRP00000014608/1-477 SDKEQRDVER RFREKELEAQ RCHLDDSRKH RARYELDKFS GRSREELKRG bmy_20567T0/1-409 ---------- -FREKELEAQ RYHLDDSRKH RAHYELDKFS GRSAEELKKG BACU017380/1-540 SDKEQRDMER RFREKELEAQ RYHLDDSRKH RAHYELDKFS GRSAEELKRG 401 450 ENSP00000364448/1-476 KGPGQDRGKK GSQDSGAPGE AMERLGRAQR CDDSPAPRKE RLANKDRPAL ENSBTAP00000027791/1-510 KGSAADGGRR GSQDRGCPVE AAERPGR-EN SEDRLAPRKE RTGNKDRPGL ENSTTRP00000014608/1-477 KGFTPDRGKK GSQDGGGPVG AAETPGR-EK SEDELAPQKE DAGSKDRPGL bmy_20567T0/1-409 KGFTPDRGKK GSQDGGGPVG AAETPGR-EK SEDGLAAEKX RTGSK----- BACU017380/1-540 KGFTPDRGKK GSQDGGGPVG AAETPGR-EK SEGGLAAEKE RTGSKDRPGL 451 500 ENSP00000364448/1-476 QLYDPGARFR ARECGGN--- -----RRICK AEGSGTGPEK REEAE----- ENSBTAP00000027791/1-510 QLYQPRARIR ACDCDGRHPE EARDGRRGEA EDSTVALAEK SEEAVWGDMH ENSTTRP00000014608/1-477 QLYQPRGGIR ARECDGNG-- -----RRGEV EDSPGAGAEK SEEAE----- bmy_20567T0/1-409 --YLEKYSSP VQQLAYRGWH QVN--RQEEL LTGGGRGGGR W--------- BACU017380/1-540 QLYQPRGGIR ARECDGRPPE EGRDRRRGEV EDSTGAGAEK SKEAESDLIK 501 550 ENSP00000364448/1-476 ---------- ---------- ---------- ---------- ---- ENSBTAP00000027791/1-510 VGDVGGGSPP QRSVDSRGRS FRKL------ ---------- ---- ENSTTRP00000014608/1-477 ---------- ---------- ---------- ---------- ---- bmy_20567T0/1-409 ---------- ---------- ---------- ---------- ---- BACU017380/1-540 HQSVFIQDKA MESTPILKTK AASATDTLQF MYSRVKLMKT KLAT