KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:33:56 2014 Check: 00 .. Name: ENSP00000354730/1-812 Len: 915 Check: 6803 Weight: 1.00 Name: ENSBTAP00000027794/1-804 Len: 915 Check: 6312 Weight: 1.00 Name: bmy_20566T0/1-915 Len: 915 Check: 8225 Weight: 1.00 Name: BACU017379/1-699 Len: 915 Check: 194 Weight: 1.00 // 1 50 ENSP00000354730/1-812 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027794/1-804 ---------- ---------- ---------- ---------- ---------- bmy_20566T0/1-915 SPFGRPLRRR ASRSRLGPRA RPPAVLPRLD AARGPPVQLL IFVLHVLHAV BACU017379/1-699 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000354730/1-812 ---------- ---------- ---------- ---------M EAFQELRKPS ENSBTAP00000027794/1-804 ---------- ---------- ---------- ---------M EVFQELRKTS bmy_20566T0/1-915 FCGLVEKPCR LACPLKTTFK TSSKTAALFL KNIIVYVRKM EVFQELRKPS BACU017379/1-699 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000354730/1-812 ARLECDHCSF RGTDYENVQI HMGTIHPEFC DEMDAGGLGK MIFYQKSAKL ENSBTAP00000027794/1-804 ARLECDHCNF RGTDYENVQI HMGTIHPEFC DEMDAGGLGK MIFYQKSAKL bmy_20566T0/1-915 ARLECDHCNF RGTDYENVQI HMGTIHPEFC DEMDAGGLGK MIFYQKSAKL BACU017379/1-699 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000354730/1-812 FHCHKCFFTS KMYSNVYYHI TSKHASPDKW NDKPKNQLNK ETDPVKSPPL ENSBTAP00000027794/1-804 FHCHKCFFTS KMYSNVYYHI TAKHSAAEKW NEKPKNQFNK EGEPVKSPPL bmy_20566T0/1-915 FHCHKCFFTS KMYSNVYYHI TSKHSAPEKW NEKPKNQLNK EADPVKSPSV BACU017379/1-699 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000354730/1-812 PEHQKIPCNS AE-PKSIPAL SMETQKLGSV LSPESPKPTP LTPLEPQKPG ENSBTAP00000027794/1-804 PEHQKTASSS AELLKPAPAL SIETQKLGPV ASPESPEPAP LPSLDSQKPG bmy_20566T0/1-915 PEHQKMASNS AELLKPIPVL SIETQKFGPV MSPESPEPTP LTSLDSQKPG BACU017379/1-699 -----MASNS AELLKPIPAL SIETQKFGPV MSPESPKPTP LTSLDSQKPG 251 300 ENSP00000354730/1-812 SVVSPELQTP -LPSPEPSKP ASVSSPEPPK SVP-VCESQK LAPVPSPEPQ ENSBTAP00000027794/1-804 PVVSPEPQTP SLPSPEPPKP APVSSPELPK PAPLVSESQK LVPVPSPEPQ bmy_20566T0/1-915 PVVSPEPQTP SLPSPEPPKP APVSSPELPK PVPLVSESQK PVPVPSPEPQ BACU017379/1-699 PVVSPEPQTP SLPSPEPPKP APVSSPELPK PVPLVSESQK PVPVPSPEPQ 301 350 ENSP00000354730/1-812 KPAPVSPESV KATLSNPKPQ KQSHFPETLG PPSASSPESP VLAASPEPWG ENSBTAP00000027794/1-804 KLAPVSPEPI KATLTNPKPQ KHSHFPETLV PPSAPSPESP VLAASPEPWG bmy_20566T0/1-915 KLAPVSPEPV KATLTNPKPQ KHSHFPETLG PPSASSPESP VLGASPEPWG BACU017379/1-699 KLAPVSPEPV KATLTNPKPQ KHSHFPETLG PPSASSPESP VLAASPEPWG 351 400 ENSP00000354730/1-812 PSPAASPESR KSARTTSPEP RKPSPSESPE PWKPFPAVSP EPRRPAPAVS ENSBTAP00000027794/1-804 PSPTASPESR KPAQTVSPEP RKLSPSVSPE PWKLFSAVSS EPRRPAPSVS bmy_20566T0/1-915 PSPTASPESR KPVRTVSPEP RKLSPSESPE PWKPFPAVSP EPRRPAPAVS BACU017379/1-699 PSPTASPESR KPVRTVSPEP RKLSPSESPE PWKPFPAVSP EPRRPAPAVS 401 450 ENSP00000354730/1-812 PGSWKPGPPG SPRPWKSNPS ASSGPWKPAK PAPSVSPGPW KPIPSVSPGP ENSBTAP00000027794/1-804 PGSWKPGPPG SPRSWKSSPS AASGPWKPAK PAPSVSP--- --------GP bmy_20566T0/1-915 PGSWKPGPPG SPRSWKSSPS ASSGPWKPAK PAPSVSPGPW KPIPSISPGP BACU017379/1-699 PGSWKPGPPG SPRSWKSSPS ASSGPWKPAK PAPSVSPGPW KPIPSISPGP 451 500 ENSP00000354730/1-812 WKPTPSVSSA SWKSSSVSPS SWKSPPASPE SWKSGPPELR KTAPTLSPEH ENSBTAP00000027794/1-804 WKPTPSMSSA SWKSSSVSSG SWKSPPASPE SWKSGPPELR KTATTLSPEH bmy_20566T0/1-915 WKPTPSLSPA SWKSSSVSPG SWKSPPASPE SWKSGPPELR KTAPTLSPEH BACU017379/1-699 WKPTPSMSPA SWKSSSVSPG SWKSPPASPE SWKSGPPELR KTAPTLSPEH 501 550 ENSP00000354730/1-812 WKAVPPVSPE LRK------- ----PGPPLS PEIRSPAGSP ELRKPSGSPD ENSBTAP00000027794/1-804 WKTVPPESPE LRK------- ----PGPTLS PEIRSPAGSP ELRKPSGSPE bmy_20566T0/1-915 WKTVPPVSPE LRKAGPPLSP ELRKPGPPLS PEIRSPAGSP ELRKPSGSPE BACU017379/1-699 WKTVPPVSPE LRK------- ----PGPPLS PEIRSPAGSP ELRKPSGSPE 551 600 ENSP00000354730/1-812 LWKLSPDQRK TSPASLDFPE SQKSSRGGSP DLWKSSFFIE PQKPVFPETR ENSBTAP00000027794/1-804 IWKFSPDQRK TSPASVDYPE SQKSSRGGSP DLWKSSFFIE PQKPVFPEIR bmy_20566T0/1-915 LWKLSPDQRK TSPASLDFSE SQKSSRGGSP DLWKSSFFIE PQKPVFPETR BACU017379/1-699 LWKLSPDQRK TSPASLDFSE SQKSSRGGSP DLWKSSFFIE PQKPVFPETR 601 650 ENSP00000354730/1-812 KPGPSGPSES PKAASDIWKP VLSIDTEPRK PALFPEPAKT APPASPEARK ENSBTAP00000027794/1-804 KPGPSGPSES PKAASDIWKP VLSVSTEPRK PSLFSEPTKT APPASPEPRK bmy_20566T0/1-915 KPGPSGPSES PKASSDIWKP VLSIDTEPRK PALFSEPTKT APPASPEPRK BACU017379/1-699 KPGPSGPSES PKASSDIWKP VLSIDTEPRK PALFSEPTKT APPASPEPRK 651 700 ENSP00000354730/1-812 RALFPEPRKH ALFPELPKSA LFSESQKAVE LGDELQIDAI DDQKCDILVQ ENSBTAP00000027794/1-804 RALFPEPRKH ALFPELPKSA IFSESQKVVE LGDEPQADAI DDQKCDVLVQ bmy_20566T0/1-915 RALFPEPRKH ALFPELPKAA VFSESQKAVE LGDELQADAI DDQKCDVLVQ BACU017379/1-699 RALFPEPRKH ALFPELPKAA VFSESQKAVE LGDELQADAI DDQKCDVLVQ 701 750 ENSP00000354730/1-812 EELLASPKKL LEDTLFPSSK KLKKDNQESS DAELSSSEYI KTDLDAMDIK ENSBTAP00000027794/1-804 EELMATPKKL LEDTLFPSSK KLKKDSQENS DAELSSSECI KADLDAVDGK bmy_20566T0/1-915 EELLATPKKL LEDTLFPSSK KLKKDNQENS DAELSSSEYI KTDLDAIDSK BACU017379/1-699 EELLATPKKL LEDTLFPSSK KLKKDNQENS DAELSSSEYI KTDLDAIDSK 751 800 ENSP00000354730/1-812 GQESSSDQEQ VDVESIDFSK ENKMDMTSPE QSRNVLQFTE EKEAFISEEE ENSBTAP00000027794/1-804 GQESSSDQEQ VDVESIDFSK ENKMDITSPE QSKNVLQFTE EKEAFISEEE bmy_20566T0/1-915 GQESSSDQEQ VDVESIDFSK ENKIDMTSPE QSKNVLQFTE EKEAFISEEE BACU017379/1-699 GQESSSDQEQ VDVESIDFSK ENKIDMTSPE QSRNVLQFTE EKEAFISEEE 801 850 ENSP00000354730/1-812 IAKYMKRGKG KYYCKICCCR AMKKGAVLHH LVNKHNVHSP YKCTICGKAF ENSBTAP00000027794/1-804 IAKYMKRGKG KYYCKICCCR AMKKGAVLHH LVNKHNVHSP YKCTICGKAF bmy_20566T0/1-915 IAKYMKRGKG KYYCKICCCR AMKKGAVLHH LVNKHNVHSP YKCTICGKAF BACU017379/1-699 IAKYMKRGKG KYYCKICCCR AMKKGAVLHH LVNKHNVHSP YKCTICGKAF 851 900 ENSP00000354730/1-812 LLESLLKNHV AAHGQSLLKC PRCNFESNFP RGFKKHLTHC QSRHNEEANK ENSBTAP00000027794/1-804 LLESLLKNHV AAHGQSLLKC PRCNFESNFP RGFKKHLTHC QSRHNEEANK bmy_20566T0/1-915 LLESLLKNHV AAHGQSLLKC PRCNFESNFP RGFKKHLTHC QSRHNEEANK BACU017379/1-699 LLESLLKNHV AAHGQSLLKC PRCNFESNFP RGFKKHLTHC QSRHNEEANK 901 950 ENSP00000354730/1-812 KLMEALEPPL EEQQI ENSBTAP00000027794/1-804 KLMEALEPPL EEQQI bmy_20566T0/1-915 KLMEALEPPL EEQQI BACU017379/1-699 KLMEALEPPL EEQQI