KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:33:59 2014 Check: 00 .. Name: ENSTTRP00000016214/1-411 Len: 490 Check: 4257 Weight: 1.00 Name: ENSP00000383894/1-486 Len: 490 Check: 4304 Weight: 1.00 Name: ENSBTAP00000027836/1-490 Len: 490 Check: 6567 Weight: 1.00 Name: bmy_03845T0/1-400 Len: 490 Check: 3729 Weight: 1.00 // 1 50 ENSTTRP00000016214/1-411 ---------- ---------- ---------- ---------- ---------- ENSP00000383894/1-486 MPRPAPARRL PGLLLLLWPL LLL--PSAAP DPVARPGFRR LETRGPGGSP ENSBTAP00000027836/1-490 SAEPTMPRHL PGLLLLLWPL LLLPPPPAAP SPMARPGLRR LGTRGPGGSP bmy_03845T0/1-400 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000016214/1-411 ---------- ---------- --------VC KSMPLDLVFI IDSSRSVRPL ENSP00000383894/1-486 GRR-PSPAAP DGAPASGTSE PGRARGAGVC KSRPLDLVFI IDSSRSVRPL ENSBTAP00000027836/1-490 GRRGPAPAAP ASVPYSGTGQ PGGARGAGVC KSRPLDLVFI IDSSRSVRPL bmy_03845T0/1-400 ---------- ---------- ---------- --MPLDLVFI IDSSRSVRPL 101 150 ENSTTRP00000016214/1-411 EFTKVKTFIS RVIDTLDIGP ADTRVAVVNY ASTVKIEFHL QTHSDKQSLK ENSP00000383894/1-486 EFTKVKTFVS RIIDTLDIGP ADTRVAVVNY ASTVKIEFQL QAYTDKQSLK ENSBTAP00000027836/1-490 QFTKVKTFVS KIIDTLDIGP MDTRVAVVNY ASTVKIEFHL QTHSDKQSLK bmy_03845T0/1-400 EFTKVKTFVS RVIDTLDIGP ADTRVAVVNY ASTVKIEFHL QTHSDKQSLK 151 200 ENSTTRP00000016214/1-411 QAVARITPLS TGTMSGLAIQ TAMDEAFTVE AGARGPASNI PKVAIIVTDG ENSP00000383894/1-486 QAVGRITPLS TGTMSGLAIQ TAMDEAFTVE AGAREPSSNI PKVAIIVTDG ENSBTAP00000027836/1-490 RAVARITPLS TGTMSGLAIQ TAMDEAFTVE AGARGPSSNI PKVAIIVTDG bmy_03845T0/1-400 QAVARITPLS TGTMSGLAIQ TAMDEAFTVE AGARGPASNI PKVAIIVTDG 201 250 ENSTTRP00000016214/1-411 RPQDQVNEVA ARAQASGIEL YAVGVDRADM ESLRMMASEP LDEHVFYVET ENSP00000383894/1-486 RPQDQVNEVA ARAQASGIEL YAVGVDRADM ASLKMMASEP LEEHVFYVET ENSBTAP00000027836/1-490 RPQDQVNEVA ARARASGIEL YAVGVDRADM ESLKMMASEP LDEHVFYVET bmy_03845T0/1-400 RPQDQVNEVA ARAQASGIEL YAVGVDRADM ESLKMMASEP LDEHVFYVET 251 300 ENSTTRP00000016214/1-411 YGVIEKLSSR FQETFCALDP CALGTHQCQH VCVSDGEGKH HCECSQGYSL ENSP00000383894/1-486 YGVIEKLSSR FQETFCALDP CVLGTHQCQH VCISDGEGKH HCECSQGYTL ENSBTAP00000027836/1-490 YGVIEKLSSR FQETFCALDP CALGTHQCQH VCISDGEGRH HCECSQGYSL bmy_03845T0/1-400 YGVIEKLSSR FQKTFCALDP CALGTHQCQH VCVSDGEGKH HCECSQGYSL 301 350 ENSTTRP00000016214/1-411 NADKKTCSVI NKCALNTHGC EHICVNDRNG SYHCECYEGY TLNEDRKTCS ENSP00000383894/1-486 NADKKTCSAL DRCALNTHGC EHICVNDRSG SYHCECYEGY TLNEDRKTCS ENSBTAP00000027836/1-490 NADKKTCSAI DKCALNTHGC EHICVNDRTG SYHCECYEGY TLNEDRKTCS bmy_03845T0/1-400 NADKKTCSVI DKCALNTHGC EHICVNDRTG SYHCECYEGY TLNEDRKTCS 351 400 ENSTTRP00000016214/1-411 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXRDQCALG ENSP00000383894/1-486 AQDKCALGTH GCQHICVNDR TGSHHCECYE GYTLNADKKT CSVRDKCALG ENSBTAP00000027836/1-490 AQDQCALGTH GCQHICVNDR AGSHHCECYE GYTLNEDKKT CSVLNQCALG bmy_03845T0/1-400 AQDQCALGTH GCQHICVNDR AGSHHCECYE GYTLNEDKKT CSVRNQCALG 401 450 ENSTTRP00000016214/1-411 SHGCQHICVN DGAASYHCDC YTGYTLNEDK KTCSAIAEAR RLISTEDACA ENSP00000383894/1-486 SHGCQHICVS DGAASYHCDC YPGYTLNEDK KTCSATEEAR RLVSTEDACG ENSBTAP00000027836/1-490 SHGCQHICVY DGNASYHCDC DTGYTLNEDK KTCSAIEEAR RLISTEDACA bmy_03845T0/1-400 SHGCQHICVN DGAASYHCDC YTGYTLNEDK KTCSAIAEAR RLISTEDACA 451 500 ENSTTRP00000016214/1-411 CEATLAFQDK VSSYLQRLNT K-LDDILEKL QANEYGQIHR ENSP00000383894/1-486 CEATLAFQDK VSSYLQRLNT K-LDDILEKL KINEYGQIHR ENSBTAP00000027836/1-490 CEATLAFQDK VNSYLQRLNS KSLDDILEKL QANEYGQVHR bmy_03845T0/1-400 CEATLAFQDK VSSYLQRLNT K-------HI LSGSFSASA-