KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:02 2014 Check: 00 .. Name: ENSP00000464814/1-593 Len: 885 Check: 1674 Weight: 1.00 Name: ENSBTAP00000027845/1-562 Len: 885 Check: 5585 Weight: 1.00 Name: BACU007089/1-855 Len: 885 Check: 8594 Weight: 1.00 Name: ENSTTRP00000015552/1-563 Len: 885 Check: 9193 Weight: 1.00 Name: bmy_15659T0/1-574 Len: 885 Check: 7043 Weight: 1.00 // 1 50 ENSP00000464814/1-593 MRTPRLRAQP RGAVYQAPSP PPAPVGLGSM AVFRSGLLVL TTPLASLAPR ENSBTAP00000027845/1-562 ---------- ---------- ---------M AVFRSGLLVL TTPLTSLAPR BACU007089/1-855 ---------- ---------- ---------M AVFRSGLLVL TTPLTSLAPR ENSTTRP00000015552/1-563 ---------- ---------- ---------M AVFRSGLLVL TTPLTSLAPR bmy_15659T0/1-574 ---------- ---------- ---------M AVFRSGLLVL TTPLTSLAPR 51 100 ENSP00000464814/1-593 LASILTSAAR LVNHTLYVHL QPGMSLEGPA QPQSSPVQAT FEVLDFITHL ENSBTAP00000027845/1-562 LAPILSSAAR LVNHTLYVHL QPGMSLGGPA QPQSSPVQAT FEVLDFITHL BACU007089/1-855 LAPILTSAAR LVNHTLYVHL QPGMSLGGPA QPQSSPVQAT FEVIDFITHL ENSTTRP00000015552/1-563 LAPILTSAAR LVNHTLYVHL QPGMCLGGPA QPQSSPVQAT FEVIDFITHL bmy_15659T0/1-574 LAPILTSAAR LVNHTLYIHL QPGMSLGGPA QPQSSPVQAT FEVIDFITHL 101 150 ENSP00000464814/1-593 YAGADVHRHL DVRILLTNIR TKSTFLPPLP TSVQNLAHPP EVVLTDFQTL ENSBTAP00000027845/1-562 YAGADVHRHL DVRILLTNIR TKS-CLPPLP TSVQNLAHPP EVVLTDFQTL BACU007089/1-855 YAGADVHRHL DVRILLTNIR TKS-FLPPLT SSVQNLAHPP EVVLTDFQTL ENSTTRP00000015552/1-563 YAGADVHRHL DVRILLTNIR TKS-FLPPLT GSVQNLAHPP EVVLTDFQTL bmy_15659T0/1-574 YAGADVHRHL DVRILLTNIR TKS-FLPPLT SSVQNLAHPP EVVLTDFQTL 151 200 ENSP00000464814/1-593 DGSQYNPVKQ QLVRYATSCY SCCPRLASVL LYSDYGIGEV PVEPLDVPLP ENSBTAP00000027845/1-562 DGSQYNPAKQ QLERYATSCY SCCPQLSSVL LYPDYGPAVS PAGSLGVHLP BACU007089/1-855 DGSQYNPAKQ QLERYATSCY SCCPQLSSVL LYPDYGPGVL PVGSLDVPLP ENSTTRP00000015552/1-563 DGSQYNPAKQ QLERYATSCY SCCPQLSSVL LYPDYGPGVL PVGSLDVPLP bmy_15659T0/1-574 DGSQYNPAKQ QLERYATSCY SCCPQLSSVL LYPDYGPGVL PVGSLDVPVP 201 250 ENSP00000464814/1-593 STIRPASPVA GSPKQPVRGY YRGAVGGTFD RLHNAHKVLL SVACILAQEQ ENSBTAP00000027845/1-562 STIRPTSPVA RSAKQPVRGH QRGAVGGTFD RLHNAHKVLL SVACILAQEQ BACU007089/1-855 STISPASPVG RSAKQPVRGH QRGAVGGTFD RLHNAHKVLL SVACLLAQEQ ENSTTRP00000015552/1-563 STISPASPVG RSAKQPVRGH QRGAVGGTFD RLHNAHKVLL SVACLLAQEQ bmy_15659T0/1-574 STISPASPVG RSAKQPVRGH QRGAVGGTFD RLHNAHKVLL SVACLLAQEQ 251 300 ENSP00000464814/1-593 LVVGVADKDL LKSKLLPELL QPYTERVEHL SEFLVDIKPS LTFDVIPLLD ENSBTAP00000027845/1-562 LVVGVADKDL LKSKLLPELL QPYTERVEHL SEFLVDIKPS LTFDIIPLLD BACU007089/1-855 LVVGVADKDL LKSKLLPELL QPYAERVEHL SEFLVDIKPS LTFDIIPLLD ENSTTRP00000015552/1-563 LVVGVADKDL LKSKLLPELL QPYAERVEHL SEFLVDIKPS LTFDIIPLLD bmy_15659T0/1-574 LVVGVADKDL LKSKLLPELL QPYAERVEHL SEFLVDIKPS LTFDIIPLLD 301 350 ENSP00000464814/1-593 PYGPAGSDPS LEFLVVSEET YRGGMAINRF RLENDLEELA LYQIQLLKDL ENSBTAP00000027845/1-562 PYGPAGSDPS LEFLVVSEET YRGGMAVNRF RLENDLEELT LYQIQLLKDL BACU007089/1-855 PYGPAGSDPS LEFLVVSEET YHGGMAVNRF RLENDLEELT LYQIQLLKDL ENSTTRP00000015552/1-563 PYGPAGSDPS LEFLVVSEET YRGGMAVNRF RLENDLEELT LYQIQLLKDL bmy_15659T0/1-574 PYGPAGSDPS LEFLVVSEET YRGGMAVNRF RLENDLEELT LYQIQLLKDL 351 400 ENSP00000464814/1-593 RHTENEEDKV SSSSFRQRML GNLLRPPYER PELPTCLYVI GLTGISGSGK ENSBTAP00000027845/1-562 NHKENEEDKV SSSSFRQQML GNLLRPPYKR PELPPGFYVI GLTGISGSGK BACU007089/1-855 NHKENEEDKV SSSSFRQQML GNLLRPPHKR PELPPGFYVI GLTGISGSGK ENSTTRP00000015552/1-563 NHKENEEDKV SSSSFRQQML GNLLRPPHKR PELPPGFYVI GLTGISGSGK bmy_15659T0/1-574 NHKENEEDKV SSSSFRQQML GNLLRPPHKR PELPPGFYVI GLTGISGSGK 401 450 ENSP00000464814/1-593 SSIAQRLKGL GAFVIDSDHL GHRAYAPGGP AYQPVVEAFG TDILHKDGII ENSBTAP00000027845/1-562 SSVAQRLKGL GAYIIDSDHL GHRAYAPGGP AYQPVVEAFG TDILHKDGII BACU007089/1-855 SSVAQRLKGL GAYVIDSDHL GHRAYAPGGP AYQPVVEAFG TDILHKDGII ENSTTRP00000015552/1-563 SSVAQRLKGL GAYVIDSDHL GHRAYAPGGP AYQPVVKAFG TDILHKDGII bmy_15659T0/1-574 SSVAQRLKGL GAYVIDSDHL GHRAYAPGGP AYQPVVEAFG TDILHKDGII 451 500 ENSP00000464814/1-593 NRKVLGSRVF GNKKQLKILT DIMWPIIAKL AREEMDRAVA EGKRVCVIDA ENSBTAP00000027845/1-562 NRKVLGSRVF GNKKQLKILT DIMWPVIAKL AREEMDQAVA EGKRVCVIDA BACU007089/1-855 NRKVLGSRVF GNKKQLKILT DIMWPVIAKL AREEMEQAMA EGKHVCVIDA ENSTTRP00000015552/1-563 NRKVLGSRVF GNKKQLKILT DIMWPVIAKL AREEMEQAMA EGKQVCVIDA bmy_15659T0/1-574 NRKVLGSRVF GNKKQLKILT DIMWPVIAKL AREEMEQAMA EGKHVCVIDA 501 550 ENSP00000464814/1-593 AVLLEAGWQN LVHEVWTAVI PETEAVRRIV ERDGLSEAAA QSRLQSQMSG ENSBTAP00000027845/1-562 AMLLEAGWQN MVHEVWTVVI PETEAIRRIM ERDGLSEAAA QSRLQSQMSG BACU007089/1-855 AMLLEAGWQN MVHEVWTVVI PETEAVRRIV ERDGLSEDAA QSRLQSQMSG ENSTTRP00000015552/1-563 AMLLEAGWQN MVHEVWTVVI PETEAVRRIV ERDGLSEAAA QSRLQSQMSG bmy_15659T0/1-574 AMLLEAGWQN MVHEVWTVVI PETEAVRRIV ERDGLSEAAA QSRLQSQMSG 551 600 ENSP00000464814/1-593 QQLVEQSHVV LSTLWEPHIT QRQ------- --V------E K--------- ENSBTAP00000027845/1-562 QQLVDQSHVV LSTMWEPHVT QRQ------- --V------E K--------- BACU007089/1-855 QQLVDQSHVV LSTLWEPHVT QRQGASPRAG FRFGGSEMTE PGASPEDPWV ENSTTRP00000015552/1-563 QQLVDQSHVV LSTLWEPHVT QHQ------- --V------E K--------- bmy_15659T0/1-574 QQLVDQSHVV LSTLWEPHVT QRQ------- --VGGESLGP P--------- 601 650 ENSP00000464814/1-593 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027845/1-562 ---------- ---------- ---------- ---------- ---------- BACU007089/1-855 KASPVGAHAG EGRAGRARAR RGSGRRGDSL KSPELLPLSG PRGCREDSSH ENSTTRP00000015552/1-563 ---------- ---------- ---------- ---------- ---------- bmy_15659T0/1-574 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000464814/1-593 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027845/1-562 ---------- ---------- ---------- ---------- ---------- BACU007089/1-855 PACAKVEYAY SDNSLDPGLF VESTRKGSVV SRANSIGSTS ASSVPNTDDE ENSTTRP00000015552/1-563 ---------- ---------- ---------- ---------- ---------- bmy_15659T0/1-574 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000464814/1-593 ---------- ---------- ---------- ----AWALLQ KRIPKTHQ-- ENSBTAP00000027845/1-562 ---------- ---------- ---------- ----AWALLQ KRISEAPS-- BACU007089/1-855 DSDYHQESYK ESYKDRRRRA HTQAEQKRRD AIKRGYDDLQ TIVPTCQQQD ENSTTRP00000015552/1-563 ---------- ---------- ---------- ----AWALLQ KRISKAHQ-- bmy_15659T0/1-574 ---------- ---------- ---------- ----AEAHLR GTIRPMTDNE 751 800 ENSP00000464814/1-593 ---ALD---- ---------- ---------- ---------- ---------- ENSBTAP00000027845/1-562 ---GP----- ---------- ---------- ---------- ---------- BACU007089/1-855 FSIGSQKLSK AIVLQKTIDY IQFLHKEKKK QEEEVSTLRK DVMALKIMKV ENSTTRP00000015552/1-563 ---AHD---- ---------- ---------- ---------- ---------- bmy_15659T0/1-574 FSVGPN---- ---------- ---------- ---------- ---------- 801 850 ENSP00000464814/1-593 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027845/1-562 ---------- ---------- ---------- ---------- ---------- BACU007089/1-855 NYEQIVKAHQ DNPHEGEDQV SDQVKFNVFQ GIMDSLFQSF NASISVASFQ ENSTTRP00000015552/1-563 ---------- ---------- ---------- ---------- ---------- bmy_15659T0/1-574 ---------- ---------- ---------- ---------- ---------- 851 900 ENSP00000464814/1-593 ---------- ---------- ---------- ----- ENSBTAP00000027845/1-562 ---------- ---------- ---------- ----- BACU007089/1-855 ELSACVFSWI EEHCKPQTLR EIVIGVLHQL KNQLY ENSTTRP00000015552/1-563 ---------- ---------- ---------- ----- bmy_15659T0/1-574 ---------- ---------- ---------- -----