KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:02 2014 Check: 00 .. Name: ENSBTAP00000027851/1-217 Len: 225 Check: 6566 Weight: 1.00 Name: ENSP00000377384/1-217 Len: 225 Check: 936 Weight: 1.00 Name: ENSTTRP00000015550/1-205 Len: 225 Check: 360 Weight: 1.00 Name: bmy_15657T0/1-225 Len: 225 Check: 6780 Weight: 1.00 Name: BACU007142/1-217 Len: 225 Check: 6737 Weight: 1.00 // 1 50 ENSBTAP00000027851/1-217 MSKGRSEAAA GASGILLKYL QEQNRPYSAQ DVFGNLQREH GLGKTAVVKA ENSP00000377384/1-217 MSKGRAEAAA GAAGILLRYL QEQNRPYSSQ DVFGNLQREH GLGKAVVVKT ENSTTRP00000015550/1-205 MSKGRAEAVA GASGILLRYL QEQNRPYSAQ DVFGNLQREH GLGKAAVVKA bmy_15657T0/1-225 MSKGRAEAVA GASGILLRYL QEQNRPYSAQ DVFGNLQREH GLGKAAVVKA BACU007142/1-217 MSKGRAEAVA GASGILLRYL EEQNRPYSAQ DVFGNLQREH GLGKAAVVKA 51 100 ENSBTAP00000027851/1-217 LEQLAQQGKI KEKMYGKQKI YFADQDQFDV VSDADLQGLD AKILALTAKV ENSP00000377384/1-217 LEQLAQQGKI KEKMYGKQKI YFADQDQFDM VSDADLQVLD GKIVALTAKV ENSTTRP00000015550/1-205 LDQLAQQGKI KEKMYGKQKI YFADQEQFDT ASDADLQVLD AKIVALTAKV bmy_15657T0/1-225 LDQLAQQGKI KEKMYGKQKI YFADQEQFDM VSDADLQALD AKIVALTAKV BACU007142/1-217 LDQLAQQGKI KEKMYGKQKI YFADQEQFDM VSDADLQALD AKIVALTAKV 101 150 ENSBTAP00000027851/1-217 QSLQQSCRHM EA-------- ELKELTSALT TPEMQKEIEE LKKECAGYRE ENSP00000377384/1-217 QSLQQSCRYM EA-------- ELKELSSALT TPEMQKEIQE LKKECAGYRE ENSTTRP00000015550/1-205 QSLQQGCRHM EA-------- ---------- --EMQKEIQE LKKECAGYTE bmy_15657T0/1-225 QSLQQSCRHM EAGRTGQPPE ELKELTSALT TPEMQKEIQE LKKECAGYTE BACU007142/1-217 QSLQQSCRHM EA-------- ELKELTSALT TPEMQKEIQE LKKECAGYTE 151 200 ENSBTAP00000027851/1-217 RLKNIKAATN HVTPEEKEQV YKERQKYHKE WRQRKRMATE LSDAILEGYP ENSP00000377384/1-217 RLKNIKAATN HVTPEEKEQV YRERQKYCKE WRKRKRMATE LSDAILEGYP ENSTTRP00000015550/1-205 RLKNIKAATN HVTPEEKEQV YRERQRYCKE WRKRKRMATE LSDAILEGYP bmy_15657T0/1-225 RLKNIKAATN HVTPEEKEQV YRDRQRYCKE WRKRKRMATE LSDAILEGYP BACU007142/1-217 RLKTIKAATN HVTPEEKEQV YRERQRYCKE WRKRKRMATE LSDAILEGYP 201 250 ENSBTAP00000027851/1-217 KSKKQFFEEV GIETDEDHNV KLPDP ENSP00000377384/1-217 KSKKQFFEEV GIETDEDYNV TLPDP ENSTTRP00000015550/1-205 KSKKQFFEEV GIETDEDYNL KLPDP bmy_15657T0/1-225 KSKKQFFEEV GIETDEDYNL KLPDP BACU007142/1-217 KSKKQFFEEV GIETDEDYNL KLPDP