KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:06 2014 Check: 00 .. Name: ENSTTRP00000013060/1-479 Len: 486 Check: 4491 Weight: 1.00 Name: ENSP00000419266/1-407 Len: 486 Check: 5435 Weight: 1.00 Name: bmy_19814T0/1-405 Len: 486 Check: 2916 Weight: 1.00 Name: ENSBTAP00000027866/1-404 Len: 486 Check: 3234 Weight: 1.00 Name: BACU003778/1-317 Len: 486 Check: 9739 Weight: 1.00 // 1 50 ENSTTRP00000013060/1-479 MMERIRKEMI LMERGLHSPT AGKRFSNLSD SAGNAVLEAL ENSQHPARLS ENSP00000419266/1-407 -MESRKDMVV FLDGGQLGTL VGKRVSNLSE AVGSPLPEPP EKMVPRGCLS bmy_19814T0/1-405 -MESRKDMVM FLDGGQLGTL VGKRVSNLSE AVGSPLPEPP EKMVPRGCLS ENSBTAP00000027866/1-404 -MESRKDMVM FLDGGQLGTL VGKRVSNLSE AVGSPLPEPP EKMVPRGCLS BACU003778/1-317 -MESRKDMVM FLDGGQLGTL VGKRVSNLSE AVGSPLPEPP EKMVPRG--- 51 100 ENSTTRP00000013060/1-479 PRLPSAPLHS ALGDLPAKGK FEIDTLFNLQ HPGSESTVSS EI-------A ENSP00000419266/1-407 PRAVPPATRE RGGGGPEEEP VD-GLAGSAA GPGAEPQVAG AAMLGPGPPA bmy_19814T0/1-405 PRAGPPAARE RGGGGLEEEP VD-GLAGIVA RPGAESRAAG AAVLGPGPPA ENSBTAP00000027866/1-404 PRAGPPAARE RGGGGLEEEP VD-GLAGSAA GPGAESRAAG AAVLGPGPPA BACU003778/1-317 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013060/1-479 SAAEGRKKPG HYSEAAAEAD MSSDVEVGCS ALRSPGGLGA APLKENNGKG ENSP00000419266/1-407 PSVDSLSGQG QPSSSDTESD FYEEIEVSCT ---PDCATGN AEYQHSKGSG bmy_19814T0/1-405 ASADSLPGQG QPSSSDTESD FYEEIEVSCT ---PDCATGN AEYQHSKGPG ENSBTAP00000027866/1-404 ASADSLSGQG QPSSSDTESD FYEEIEVSCT ---PDCATGN AEYQHSKGPG BACU003778/1-317 --------QG QPSSSDTESD FYEEIEVSCT ---PDCATGN AEYQHSKGPG 151 200 ENSTTRP00000013060/1-479 FAESGSAAGT TTSASGSGLG SLHGGGGGGG GGAGAALVGS GSGADQVRRY ENSP00000419266/1-407 ------SEAL VGSPNGGSET PKSNGGSGGG GSQGTL---A CSASDQMRRY bmy_19814T0/1-405 ------SEAL ASSPNGSGEA PKSNGS---G GSQGTL---A CSASDQMRRY ENSBTAP00000027866/1-404 ------SEAL ASSPNGSSET SKSNGS---G GSQGTL---A CSASDQMRRY BACU003778/1-317 ------SEAL ASSPNGSGEA PKSNGS---G GSQGTL---A CSASDQMRRY 201 250 ENSTTRP00000013060/1-479 RTAFTREQIA RLEKEFYREN YVSRPRRCEL AAALNLPETT IKVWFQNRRM ENSP00000419266/1-407 RTAFTREQIA RLEKEFYREN YVSRPRRCEL AAALNLPETT IKVWFQNRRM bmy_19814T0/1-405 RTAFTREQIA RLEKEFYREN YVSRPRRCEL AAALNLPETT IKVWFQNRRM ENSBTAP00000027866/1-404 RTAFTREQIA RLEKEFYREN YVSRPRRCEL AAALNLPETT IKVWFQNRRM BACU003778/1-317 RTAFTREQIA RLEKEFYREN YVSRPRRCEL AAALNLPETT IKVWFQNRRM 251 300 ENSTTRP00000013060/1-479 KDKRQRLAMS WPHPADPSFY TYMMTHAVAT GSLPYPFHSH VPLHYYPXXX ENSP00000419266/1-407 KDKRQRLAMT WPHPADPAFY TYMMSHAAAA GGLPYPFPSH LPLPYYS--- bmy_19814T0/1-405 KDKRQRLAMT WPHPADPAFY TYMMSHAAAA GGLPYPFPSH LPLPYYS--- ENSBTAP00000027866/1-404 KDKRQRLAMT WPHPADPAFY TYMMSHAAAA GGLPYPFPSH LPLPYYS--- BACU003778/1-317 KDKRQRLAMT WPHPADPAFY TYMMSHAAAA GGLPYPFPSH LPLPYYS--- 301 350 ENSTTRP00000013060/1-479 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000419266/1-407 ---------- ---------- ---------- ---------- ---------- bmy_19814T0/1-405 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027866/1-404 ---------- ---------- ---------- ---------- ---------- BACU003778/1-317 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000013060/1-479 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000419266/1-407 ---------- PVGLGAASAA SAAASPFSGS LRPLDTFRVL SQPYPRPELL bmy_19814T0/1-405 ---------- PVGLGAASAA SAAASPFSGP LRPLDTFRVL SQPYPRPELL ENSBTAP00000027866/1-404 ---------- PVGLGAASAA SAAASPFSGP LRPLDTFRVL SQPYPRPELL BACU003778/1-317 ---------- PVGLGAA--- ---------- -------RPH CVPPPPP--- 401 450 ENSTTRP00000013060/1-479 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000419266/1-407 CAFRHPPLYP GPAHGLGASA GGPCSCLACH SGPANGLAPR A-AAASDFTC bmy_19814T0/1-405 CAFRHPPLYP GPAHGLGTAA GGPCSCLACH GGPANGLAPR AGAAASDFTC ENSBTAP00000027866/1-404 CAFRHPPLYP GPAHGLGTAA GGPCSCLACH GGPANGLAPR A-AAASDFTC BACU003778/1-317 -----PPPYP GPAHGLGTAA GGPCSCLACH GGPANGLAPR AAAAASDFTC 451 500 ENSTTRP00000013060/1-479 XXXXXXXXXX XXXXXXXXXX XXXXXXXXNE TTLTRS ENSP00000419266/1-407 ASTSRSDSFL TFAPSVLSKA SSVALDQREE VPLTR- bmy_19814T0/1-405 ASTSRSDSFL TFAPSVLSKA SSVALDQREE VPLTR- ENSBTAP00000027866/1-404 ASTSRSDSFL SFAPSVLSKA SSVALDQREE VPLTR- BACU003778/1-317 ASTSRSDSFL TFAPSVLSKA SSVALDQREE VPLTR-