KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:07 2014 Check: 00 .. Name: ENSTTRP00000005118/1-487 Len: 513 Check: 1016 Weight: 1.00 Name: ENSP00000376945/1-458 Len: 513 Check: 5517 Weight: 1.00 Name: ENSBTAP00000027872/1-458 Len: 513 Check: 344 Weight: 1.00 Name: bmy_04875T0/1-469 Len: 513 Check: 35 Weight: 1.00 Name: BACU003976/1-458 Len: 513 Check: 7548 Weight: 1.00 // 1 50 ENSTTRP00000005118/1-487 MKLPPGPRDD PCAWDXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000376945/1-458 MELPLGRCDD SRTWDDDSDP ESETDPDAQA KAYVARVLSP PKSGLAFSRP ENSBTAP00000027872/1-458 MELPPGPRDD PHAWDDDSDP ELEPDPDAQA EAYVARVLSP PKLGLAPPRA bmy_04875T0/1-469 MELPPGPRDD PCAWDDDSEP EPEPDPDAQA EAYVARVLSP PKLGLAPSRA BACU003976/1-458 MELPPGPRDD PCAWDDDSEP EPEPDPDAQA EAYVARVLSP PKLGLAPSRA 51 100 ENSTTRP00000005118/1-487 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000376945/1-458 SQLSTPAASP SASEPRAASR VSAVSEPGLL SLPPELLLEI CSYLDARLVL ENSBTAP00000027872/1-458 PPLPAPTVSF GSLEPRAASK GPTVAVPGLL SLPPELLLEI CAYLDARLVL bmy_04875T0/1-469 PPLPAPAVSL GALEPRAASK GPAVAVPGLL SLPPELLLEI CAYLDARLVL BACU003976/1-458 PPLPAPAVSL GALEPRAASK GRAVAVPGLL SLPPELLLEI CAYLDARLVL 101 150 ENSTTRP00000005118/1-487 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXEDF DWPAACIELE ENSP00000376945/1-458 HVLSRVCHAL RDLVSDHVTW RLRALRRVRA PYPVVEEKNF DWPAACIALE ENSBTAP00000027872/1-458 HVLPRVCHAL RDLVRDRVTW RLRAQRRVRA PYPVVEEEDF DWPTACIELE bmy_04875T0/1-469 HVLPRVCHAL RDLVRDHVTW RLRAQRRVRA PYPVVEEEDF DWPAACIELE BACU003976/1-458 HVLPRVCHAL RDLVRDHVTW RLRAQRRVRA PYPVVEEEDF DWPTACIELE 151 200 ENSTTRP00000005118/1-487 QHLSRWAEDG RRTEYFCLAD GHFASIDSVL LL-------- ---------- ENSP00000376945/1-458 QHLSRWAEDG RWVEYFCLAE GHVASVDSVL LL-------- ---------- ENSBTAP00000027872/1-458 QHLSRWADDG RRAEYFCLAD GHFASIDSVL LL-------- ---------- bmy_04875T0/1-469 QHLSRWAEDG RRAEYFCLAD GHFASIDSVL LLQVRRGSVE GQAVVGQGDH BACU003976/1-458 QHLSRWAEDG RRAEYFCLAD GHFASIDSVL LL-------- ---------- 201 250 ENSTTRP00000005118/1-487 --------QG GTLCLSGSRD RNVNLWDLQQ LGVEPSRVLV KALGTQKNST ENSP00000376945/1-458 --------QG GSLCLSGSRD RNVNLWDLRQ LGTESNQVLI KTLGTKRNST ENSBTAP00000027872/1-458 --------QG GTLCLSGSRD RNVNLWDLQQ LGVEPSRVLV KTLGTQKNST bmy_04875T0/1-469 NNITSLLSQG GTLCLSGSRD RNVNLWDLQQ LGVEPSR--- ---------- BACU003976/1-458 --------QG GTLCLSGSRD RNVNLWDLQQ LGVEPSRVLV KALGTQKNST 251 300 ENSTTRP00000005118/1-487 HKGWVWSLAA LDHRVCSGSW DSTVKLWDMA ADGQQFGEIK AKAAVLCLSY ENSP00000376945/1-458 HEGWVWSLAA QDHRVCSGSW DSTVKLWDMA ADGQQFGEIK ASSAVLCLSY ENSBTAP00000027872/1-458 HKGWVWSLAA LDHRVCSGSW DSTVKLWDMA ADGQQFGEIK GKAAVLCLSY bmy_04875T0/1-469 --GWVWSLAA LDHRVCSGSW DSTVKLWDMA ADGQQFGEIK AKAAVLCLSY BACU003976/1-458 HKGWVWSLAA LDHRVCSGSW DSTVKLWDMA ADGQQFGEIK AKAAVLCLSY 301 350 ENSTTRP00000005118/1-487 RPDILVTGTY DKKVTVYDPR GRMETQGPGA GQGPPRGSDV PPPWPIAHAV ENSP00000376945/1-458 LPDILVTGTY DKKVTIYDPR ---------- ---------- ---------A ENSBTAP00000027872/1-458 RPDILVTGTY DKKVTVYDPR ---------- ---------- ---------V bmy_04875T0/1-469 RPDILVTGTY DKKVTVYDPR ---------- ---------- ---------V BACU003976/1-458 RPDILVTGTY DKKVTVYDPR ---------- ---------- ---------V 351 400 ENSTTRP00000005118/1-487 GPALLKSRRL HSSAVLALLA DDRHIISGSE DHTLVVFDRR ANSVLQRLQL ENSP00000376945/1-458 GPALLKHQQL HSRPVLTLLA DDRHIISGSE DHTLVVVDRR ANSVLQRLQL ENSBTAP00000027872/1-458 GPALLKSRRL HSSAVLALLA DDRHIISGSE DHTLVVFDRR ANSVLQRLQL bmy_04875T0/1-469 GPALLKSRRL HSSAVLALLA DDRHIISGSE DHTLVVFDRR ANSVLQRLQL BACU003976/1-458 GPALLKSRRL HSSAVLALLA DDRHIISGSE DHTLVVFDRR ANSVLQRLQL 401 450 ENSTTRP00000005118/1-487 DSYLLCMSYQ EPQLWAGDNQ GLLHVFANRD GCFQLVRSFD VGHRSQITGI ENSP00000376945/1-458 DSYLLCMSYQ EPQLWAGDNQ GLLHVFANRN GCFQLIRSFD VGHSFPITGI ENSBTAP00000027872/1-458 DSYLLCMSYQ EPQLWAGDNQ GLLHVFANRS GCFQLVRSFD VGHRSQITGI bmy_04875T0/1-469 DSYLLCMSYQ EPQLWAGDNQ GLLHVFANRD GCFQLVRSFD VGHRSQITGI BACU003976/1-458 DSYLLCMSYQ EPQLWAGDNQ GLLHVFANRD GCFQLVRSFD VGHRSQITGI 451 500 ENSTTRP00000005118/1-487 KHSLGALYTT STDKTIRVHV PTDPPRTICT RSHHNVLNGI CAEGNLVVAA ENSP00000376945/1-458 QYSVGALYTT STDKTIRVHV PTDPPRTICT RRHDNGLNRV CAEGNLVVAG ENSBTAP00000027872/1-458 KHSLGALYTT STDKTIRVHV PTDPPRTICT RSHHNVLNGI CAEGNLVVAA bmy_04875T0/1-469 KHSLGALYTT STDKTIRVHV PTDPPRTLCT RSHHNVLNGI CAEGNLVVAA BACU003976/1-458 KHSLGALYTT STDKTIRVHV PTDPPRTICT RSHHNVLNGI CAEGNLVVAA 501 550 ENSTTRP00000005118/1-487 SGGLSLEVWR LQA ENSP00000376945/1-458 SGDLSLEVWR LQA ENSBTAP00000027872/1-458 SGGLSLEVWR LQA bmy_04875T0/1-469 SGGLSLEVWR LQA BACU003976/1-458 SGGLSLEVWR LQA