KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:10 2014 Check: 00 .. Name: ENSTTRP00000009662/1-341 Len: 492 Check: 1632 Weight: 1.00 Name: bmy_20418T0/1-467 Len: 492 Check: 8177 Weight: 1.00 Name: ENSP00000449428/1-357 Len: 492 Check: 4923 Weight: 1.00 Name: BACU002224/1-350 Len: 492 Check: 8791 Weight: 1.00 Name: ENSBTAP00000027889/1-350 Len: 492 Check: 8764 Weight: 1.00 // 1 50 ENSTTRP00000009662/1-341 ---------- ---------- ---------- ---------- ---------- bmy_20418T0/1-467 MSHQTGIQGN GAGATCGQGA PGRPPASRAG GGMGRAGVGP GPQGVGLGNE ENSP00000449428/1-357 MSHQTGIQ-- ---------- ---------- ---------- ---------- BACU002224/1-350 MSHQTGIQ-- ---------- ---------- ---------- ---------- ENSBTAP00000027889/1-350 MSHQTGIQ-- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009662/1-341 ---------- ---------- ---------- ---------- ---------- bmy_20418T0/1-467 PGLCASPRSR VPGAPGLPPS QPGPAVATLL MDPKFAGAKE MAFRGGRGEG ENSP00000449428/1-357 ---------- ---------- ---------- ---------- ---------- BACU002224/1-350 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027889/1-350 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000009662/1-341 ---------- ---------- ---------- ---------- ----SEDVKD bmy_20418T0/1-467 GVPAAAAAAV SPTFPFFIGL GRPGTVEAIG ALFAVYFSVS FSTASEDVKD ENSP00000449428/1-357 ---------- ---------- ---------- ---------- ---ASEDVKE BACU002224/1-350 ---------- ---------- ---------- ---------- ---ASEDVKD ENSBTAP00000027889/1-350 ---------- ---------- ---------- ---------- ---ASEDVKD 151 200 ENSTTRP00000009662/1-341 IFARARNGKY RLLKISIENE KLVVGACRQP LDYWDKDYDS FVLPLLEDKX bmy_20418T0/1-467 IFARARNGKY RLLKISIENE KLVIGACRQP LDSWDKDYDS FVLPLLEDKQ ENSP00000449428/1-357 IFARARNGKY RLLKISIENE QLVIGSYSQP SDSWDKDYDS FVLPLLEDKQ BACU002224/1-350 IFARARNGKY RLLKISIENE KLVIGACRQP LDSWDKDYDS FVLPLLEDKQ ENSBTAP00000027889/1-350 IFARARNGKY RLLKISIENE KLVIGSCRKP SDSWDQDYDS FVLPLLEDKQ 201 250 ENSTTRP00000009662/1-341 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV RQKMLYAATR ATLKKEFGGG bmy_20418T0/1-467 PCYVLLRLDS QNAQGYEWIF IAWSPDHSHV RQKMLYAATR ATLKKEFGGG ENSP00000449428/1-357 PCYILFRLDS QNAQGYEWIF IAWSPDHSHV RQKMLYAATR ATLKKEFGGG BACU002224/1-350 PCYVLFRLDS QNAQGYEWIF IAWSPDHSHV RQKMLYAATR ATLKKEFGGG ENSBTAP00000027889/1-350 PCYVLFRLDS QNAQGYEWIF IAWSPDHSHV RQKMLYAATR ATLKKEFGGG 251 300 ENSTTRP00000009662/1-341 HIKDEVFGTV KEDVSLHGYK KYLLSQSSPA PLTAAEEELR QIKINE---- bmy_20418T0/1-467 HIKDEVFGTV KEDVSLHGYK KYLLSQSSPA PLTAAEEELR QIKINE---- ENSP00000449428/1-357 HIKDEVFGTV KEDVSLHGYK KYLLSQSSPA PLTAAEEELR QIKINESPED BACU002224/1-350 HIKDEMFGTV KEDVSLHGYK KYLLSQSSPA PLTAAEEELR QIKINE---- ENSBTAP00000027889/1-350 HIKDEMFGTV KEDVSLHGYK KYLLSQSSPA PLTAAEEELR QIKINE---- 301 350 ENSTTRP00000009662/1-341 ---VQTDVSV DTKHQTLQGV AFPISREAFQ ALEKLNNRQL NYVQLEIDIK bmy_20418T0/1-467 ---VQTDVSV DTKHQTLQGV AFPISREAFQ ALEKLNNRQL NYVQL---VR ENSP00000449428/1-357 HIGVQTDVGV DTKHQTLQGV AFPISREAFQ ALEKLNNRQL NYVQLEIDIK BACU002224/1-350 ---VQTDVSV DTKHQTLQGV AFPISREAFQ ALEKLNNRQL NYVQLEIDIK ENSBTAP00000027889/1-350 ---VQTDVSV DAKHQTLQGV AFPISQEAFQ ALEKLNNRQL NYVQLEIDIK 351 400 ENSTTRP00000009662/1-341 NEIIILANTI NTELKDLPKR IPRDSARYHF FLYKHSHEGD YLESIVFIYS bmy_20418T0/1-467 DIMII----- ---MKWLHFL VSMACISNIY SLWKKVK--- ----LFFIYS ENSP00000449428/1-357 NEIIILANTT NTELKDLPKR IPKDSARYHF FLYKHSHEGD YLESIVFIYS BACU002224/1-350 NEIIILANTI HTELKDLPKR IPRDSARYHF FLYKHSHEGD YLESIVFIYS ENSBTAP00000027889/1-350 NEIIILANTI NTELKDLPKR IPKDAARYHF FLYKHSHEGD YLESIVFIYS 401 450 ENSTTRP00000009662/1-341 MPGYTCSIRE RMLYSSCKSP LLEIVERQLQ MDVIRKIEID NGDELTADFL bmy_20418T0/1-467 MPGYTCSIRE RMLYSSCKSP LLEIVERQLQ MDVIRKIEID NGDELTADFL ENSP00000449428/1-357 MPGYTCSIRE RMLYSSCKSR LLEIVERQLQ MDVIRKIEID NGDELTADFL BACU002224/1-350 MPGYTCSIRE RMLYSSCKSP LLEIVERQLQ MDVIRKIEID NGDELTADFL ENSBTAP00000027889/1-350 MPGYTCSIRE RMLYSSCKSP LLEIVERQLQ MDIIRKIEID NGDELTADFL 451 500 ENSTTRP00000009662/1-341 YEEVHPKQHA HKQSFAKPKG PSGKRGIRRL IRGPAETEAT TD bmy_20418T0/1-467 YEEVHPKQHA HKQSFAKPKG PSGKRGIRRL IRGPAETEAT TD ENSP00000449428/1-357 YEEVHPKQHA HKQSFAKPKG PAGKRGIRRL IRGPAETEAT TD BACU002224/1-350 YEEVHPKQHA HKQSFAKPKG PSGKRGIRRL IRGPAETEAT TD ENSBTAP00000027889/1-350 YEEVHPKQHA HKQSFAKPKG PSGKRGIRRI IRGPAETEAT TE