KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:15 2014 Check: 00 .. Name: ENSTTRP00000007592/1-511 Len: 513 Check: 8565 Weight: 1.00 Name: BACU004874/1-385 Len: 513 Check: 8566 Weight: 1.00 Name: ENSP00000274773/1-511 Len: 513 Check: 774 Weight: 1.00 Name: bmy_20578T0/1-472 Len: 513 Check: 2281 Weight: 1.00 Name: ENSBTAP00000027907/1-506 Len: 513 Check: 333 Weight: 1.00 // 1 50 ENSTTRP00000007592/1-511 --MAAVGPRT GPGAGAEALA LAVELQGEVT CSICLELFWE PVSVECGHSF BACU004874/1-385 MVPGALSQRV G---GAEERI LDIDM----- ---------- ---------- ENSP00000274773/1-511 --MAAVGPRT GPGTGAEALA LAAELQGEAT CSICLELFRE PVSVECGHSF bmy_20578T0/1-472 --MAAVGPRT GPGAGAEALA LAVELQGEAT CSICLELFRE PVSVECGHSF ENSBTAP00000027907/1-506 --MAAVGPRT GPGAGAEALA LAAELQGEAT CSICLELFRE PVSVECGHSF 51 100 ENSTTRP00000007592/1-511 CRACIARCWX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU004874/1-385 ---------- ---------- ---------- ---------- IISPIKALFD ENSP00000274773/1-511 CRACIGRCWE RPGAGSVGAA TRAPPFPLPC PQCREPARPS QLRPNRQLAA bmy_20578T0/1-472 CRACIARCWE RPGAGAT-AA SHKLSCSLPC PQCREPARPG QLRPNRQLAA ENSBTAP00000027907/1-506 CRACIARCWE RPGTRAT-AV SHTLSFSLPC PQCREPARPS QLRPNRQLAA 101 150 ENSTTRP00000007592/1-511 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXCQDDGRAI BACU004874/1-385 VLT------- ---------- ---------- SCGRVGRP-- ---------- ENSP00000274773/1-511 VATLLRRFSL PAAAPGEHGS QAAAARAAAA RCGQHGEPFK LYCQDDGRAI bmy_20578T0/1-472 VATLLRRFSL PAGAQGERGP ----PEAVAA GCPQHREPLK LYCQDDGRAI ENSBTAP00000027907/1-506 VATLLRRFSL PAGAPGERGP ----PEAVAA GCAQHGEPLK LYCQDDGRAI 151 200 ENSTTRP00000007592/1-511 CVVCDRAREH RAHAVLPLDE AVQEAKELLE SRLQVLKKDL EDYEAFRSTE BACU004874/1-385 ---------- ---------- -SQEVGELLE SRLKVLKKDL EDYEEFRSTE ENSP00000274773/1-511 CVVCDRAREH REHAVLPLDE AVQEAKELLE SRLRVLKKEL EDCEVFRSTE bmy_20578T0/1-472 CVVCDRAREH RAHAVLPLDE AVQEAKELLE SRLKVLKKDL EDYEAFRSTE ENSBTAP00000027907/1-506 CVVCDRAREH RAHAVLPLDE AVQEAKELLE SRLKVLKKDL EDYEAFRSTE 201 250 ENSTTRP00000007592/1-511 GKESKELLKQ MAAEREKVGA EFQALRAFLV EQEGRLLGRL EELSREVTQK BACU004874/1-385 EKESKDLLKQ MAAEREKVGA EFQALRAFLV EQEGRLLGRL EELSREVTQK ENSP00000274773/1-511 KKESKELLKQ MAAEQEKVGA EFQALRAFLV EQEGRLLGRL EELSREVAQK bmy_20578T0/1-472 EKESKDLLKQ MAAEREKVGA EFQALRAFLV EQEGRLLGRL EELSREVTQK ENSBTAP00000027907/1-506 EKESKELLKQ MAAEQEKVGA EFQALRAFLV EQEGRLLGRL EELSREVTQK 251 300 ENSTTRP00000007592/1-511 QNENLARLGG EIAQLSKLSS EIQETTGKPD LDVLQEFKNT LSRCSNVPAP BACU004874/1-385 QNENLAQLGG EIAQLSKLSS QIQETTCKPD LDFLQEFKNT LSRCSNVPAP ENSP00000274773/1-511 QNENLAQLGV EITQLSKLSS QIQETAQKPD LDFLQEFKST LSRCSNVPGP bmy_20578T0/1-472 QNENLAQLGG ---------- -IQKHT---- ---------- ---------K ENSBTAP00000027907/1-506 QNENLAQLGD EIAQLSKLSS QIQETTCKPD LDFLQEFKNT LSRCSNVPAP 301 350 ENSTTRP00000007592/1-511 KPTTVSSEMK NKVWNVSLKT FVLKGLLKKF REDLRGELEK EEKVELTLDP BACU004874/1-385 KPTTVSSEMK NKVWNVSLKT FVLKGLLKKF REDLRGELEK EEKVELTLDP ENSP00000274773/1-511 KPTTVSSEMK NKVWNVSLKT FVLKGMLKKF KEDLRGELEK EEKVELTLDP bmy_20578T0/1-472 QPTTVSSEMK NKVWNVSLKT FVLKGLLKKF REDLRGELEK EEKVELTLDP ENSBTAP00000027907/1-506 KPTTVSSEMK NKVWNASLKT FVLKGLLKKF KEDLRGELDK EEKVELTLDP 351 400 ENSTTRP00000007592/1-511 DTANPRLILS LDLKSVRLGQ RAQDLPSHPR RFDTNMRVLA SSGFSSGRHH BACU004874/1-385 DTANPRLILS LDLKSVRLGQ RAQDLPSHPR RFDTNTRVLA SCGFSSGRHH ENSP00000274773/1-511 DTANPRLILS LDLKGVRLGE RAQDLPNHPC RFDTNTRVLA SCGFSSGRHH bmy_20578T0/1-472 DTANPRLILS LDLKSVRLGQ RAQDLPSHPR RFDTNTRVLA SCGFSSGRHH ENSBTAP00000027907/1-506 DTANPRLILS LDLKSVRLGQ QAQDLPSHPR RFDTNTRVLA SCGFSSGRHH 401 450 ENSTTRP00000007592/1-511 WEVEVGSKDG WAFGVARESV RRKGLTPFTP EEGVWALQLN SGQYWAVTSP BACU004874/1-385 WEVEVGSKDG WAFGVARESV RRKGLTPFTP EEGVWALQLN SGQYWAVTSP ENSP00000274773/1-511 WEVEVGSKDG WAFGVARESV RRKGLTPFTP EEGVWALQLN GGQYWAVTSP bmy_20578T0/1-472 WEVQVGSKDG WAFGVARESV RRKGLTPFTP EEGVWALQLN SGQYWAVTSP ENSBTAP00000027907/1-506 WEVEVGSKDG WAFGVARESV RRKGLTPFTP EEGVWALQLN NGQYWAVTSP 451 500 ENSTTRP00000007592/1-511 ERTPLSCGHL SRVRVALDLE VGAVSFYAAE DMHHIYTFRV NFQERVFPLF BACU004874/1-385 ERTPLSCGHL SRVRVALDLE VGAVSFYAAE DMHHIYTFRV NFQERVFPLF ENSP00000274773/1-511 ERSPLSCGHL SRVRVALDLE VGAVSFYAVE DMRHLYTFRV NFQERVFPLF bmy_20578T0/1-472 ERTPLSCGHL SRVRVALDLE VGAVSFYAAE DMHHIYTFRV NFQDRVFPLF ENSBTAP00000027907/1-506 ERTPLSCGHL SRVRVALDLE VGAVSFYAAE DMRHIYTFRV NFQERVFPLF 501 550 ENSTTRP00000007592/1-511 SVCSTGTYLR IWP BACU004874/1-385 SVCSTGTYLR IWP ENSP00000274773/1-511 SVCSTGTYLR IWP bmy_20578T0/1-472 SVCSTGTYLR IWP ENSBTAP00000027907/1-506 SVCSTGTYLR IWP