KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:16 2014 Check: 00 .. Name: BACU000085/1-331 Len: 333 Check: 5175 Weight: 1.00 Name: bmy_08610T0/1-272 Len: 333 Check: 4351 Weight: 1.00 Name: ENSP00000361777/1-290 Len: 333 Check: 5248 Weight: 1.00 Name: ENSTTRP00000011003/1-292 Len: 333 Check: 7956 Weight: 1.00 Name: ENSBTAP00000027913/1-254 Len: 333 Check: 2353 Weight: 1.00 // 1 50 BACU000085/1-331 MLYFSNLFVI FKPLSPGAAL VLRAPGTSLF PWVDSWLFSQ HGPQNQSSLP bmy_08610T0/1-272 ---------- ---------- ---------- ---------- -------MSA ENSP00000361777/1-290 ---------- ---------- ---------- ---------- MAPKRQSPLP ENSTTRP00000011003/1-292 ---------- ---------- ---------- ---------- MAPKHQSSLP ENSBTAP00000027913/1-254 ---------- ---------- ---------- ---------- ---------- 51 100 BACU000085/1-331 PQAKKLKKPR LTAASRPEET SASQNLPKE- EKEQQEAIEH TDEVQNEIDR bmy_08610T0/1-272 PAAKVSKKEL NSNHDGADET S--------- EKEQQEAIEH IDEVQNEIDR ENSP00000361777/1-290 PQKKKPRPP- --PALGPEET SASAGLPKKG EKEQQEAIEH IDEVQNEIDR ENSTTRP00000011003/1-292 PQAKKPKKPR RTPASRPEEK SASPNLPKE- EKEQQEAIEH IDEVQNEIDR ENSBTAP00000027913/1-254 ---------- ---------- --------A- EKEQQEAIEH IDEVQNEIDR 101 150 BACU000085/1-331 LNEQASEEIL KVEQKYNKLR QPFFQKRSEL ITQSPDFWVT TLANYPQVSA bmy_08610T0/1-272 LNEQASEEIL KVEQKYNKLR QPFFQKRSEL IAKIPNFWVT TFVNHPQVSA ENSP00000361777/1-290 LNEQASEEIL KVEQKYNKLR QPFFQKRSEL IAKIPNFWVT TFVNHPQVSA ENSTTRP00000011003/1-292 LNEQASEEIL KVEQKYNKLR QPFFQKRSEL IAKIPNFWVT TFVNHPQVSA ENSBTAP00000027913/1-254 LNEQASEEIL KVEQKYNKLR QPFFQKRSEL IAKIPNFWVT TFVNHPQVSA 151 200 BACU000085/1-331 LLGEEGEEAL HYLTRVEVTE FEDIKSGYRI DFYFDENPYF ENKFLSKEFH bmy_08610T0/1-272 LLGEEDEEAL HYLTRVEVTE FEDIKSGYRI DFYFDENPYF ENKVLSKEFH ENSP00000361777/1-290 LLGEEDEEAL HYLTRVEVTE FEDIKSGYRI DFYFDENPYF ENKVLSKEFH ENSTTRP00000011003/1-292 LLGEEDEEAL HYLTRVEVTE FEDIKSGYRI DFYFDENPYF ENKVLSKEFH ENSBTAP00000027913/1-254 LLGEEDEEAL HYLTRVEVTE FEDIKSGYRI DFYFDENPYF ENKILSKEFH 201 250 BACU000085/1-331 LNESGDPSSK STEIKWKSRK DLTKRSSQTQ NKASRKRQHE EPESFFTWFT bmy_08610T0/1-272 LNESGDPSSK STEIKWKSGK DLTKRSSQTQ NKASRKRQHE EPESFFTWFT ENSP00000361777/1-290 LNESGDPSSK STEIKWKSGK DLTKRSSQTQ NKASRKRQHE EPESFFTWFT ENSTTRP00000011003/1-292 LNESGDPSSK STEIKWKSGK DLTKRSSQTQ NKASRKRQHE EPESFFTWFT ENSBTAP00000027913/1-254 LNESGDPSSK STEIKWKSGK DLTKRSSQTQ NKASRKRQHE EPESFFTWFT 251 300 BACU000085/1-331 DHSDAGADEL GEVIKDAMWP NPLQYYLFPD MDDEEGK-EE DDDDDEEEEG bmy_08610T0/1-272 DHSDAGADEL GEVIKDDIWP NPLQYYLVPD MDDEEGEGEE DDDDDEEEEG ENSP00000361777/1-290 DHSDAGADEL GEVIKDDIWP NPLQYYLVPD MDDEEGEGEE DDDDDEEEEG ENSTTRP00000011003/1-292 DHSDAGADEL GEVIKDDIWP NPLQYYLVPD MDDEEGEGEE DDDDDEEEEG ENSBTAP00000027913/1-254 DHSDAGADEL GEVIKDDIWP NPLQYYLVPD MDDEEGEGEE DDDDDEEEEG 301 350 BACU000085/1-331 LEDIDEERDA DEGEEDEDDD EREEGEEDEG EDD bmy_08610T0/1-272 LEDIDEEGDE DEGEEDEDDD EGEEGEER-- --- ENSP00000361777/1-290 LEDIDEEGDE DEGEEDEDDD EGEEGEEDEG EDD ENSTTRP00000011003/1-292 LEDIDEEGDE DEGEEDEDDD EGEEGEEDEG EDD ENSBTAP00000027913/1-254 LEDIDEEGDE DEGEEDEDDD EGEEGEEDEG EDD