KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:34:17 2014 Check: 00 .. Name: ENSTTRP00000015217/1-836 Len: 964 Check: 6131 Weight: 1.00 Name: bmy_11921T0/1-964 Len: 964 Check: 4142 Weight: 1.00 Name: ENSP00000358810/1-837 Len: 964 Check: 118 Weight: 1.00 Name: ENSBTAP00000027922/1-837 Len: 964 Check: 1049 Weight: 1.00 // 1 50 ENSTTRP00000015217/1-836 MEPAVGSPGL LIMNNKQPQP PPPPPPATAQ PPTGAPRTAG SLVPGGKARE bmy_11921T0/1-964 MEPAVGSPGL LIMNNKQPQP PPPPPPATAQ PPAGAPRTAG SLLPGGKARE ENSP00000358810/1-837 MEPAVGGPGP LIVNNKQPQP PPPPPPAAAQ PPPGAPRAAA GLLPGGKARE ENSBTAP00000027922/1-837 MEPAAGTPGP LIMNNKQPQP PPPPPPATAQ PPPGAPRTAG GLLPGGKARE 51 100 ENSTTRP00000015217/1-836 FNRNQRKDSE GYSESPDLEF EYADTDKWAA ELS------- ------ELYS bmy_11921T0/1-964 FNRNQRKDSE GYSESPDLEF EYADTDKWAA ELSGRGHGDD DTLFLTELYS ENSP00000358810/1-837 FNRNQRKDSE GYSESPDLEF EYADTDKWAA ELS------- ------ELYS ENSBTAP00000027922/1-837 FNRNQRKDSE GYSESPDLEF EYADTDKWAA ELS------- ------ELYS 101 150 ENSTTRP00000015217/1-836 YTEGPEFLMN RKCFEEDFRM HVTDKKWTEL DTNQHHTHAM RLLDGLEVTA bmy_11921T0/1-964 YTEGPEFLMN RKCFEEDFRM HVTDKKWTEL DTSQHRTHAM RLLDGLEVTA ENSP00000358810/1-837 YTEGPEFLMN RKCFEEDFRI HVTDKKWTEL DTNQHRTHAM RLLDGLEVTA ENSBTAP00000027922/1-837 YTEGPEFLMN RKCFEEDFRM HVTDKKWTEL DTNQHRTHAM RLLDGLEVTA 151 200 ENSTTRP00000015217/1-836 REKRLKVARA ILYVAQGTFG ECSSEAEVQS WMRYNIFLLL EVGTFNALVE bmy_11921T0/1-964 REKRLKVARA ILYVAQGTFG ECSSEAEVQS WMRYNIFLLL EVGTFNALVE ENSP00000358810/1-837 REKRLKVARA ILYVAQGTFG ECSSEAEVQS WMRYNIFLLL EVGTFNALVE ENSBTAP00000027922/1-837 REKRLKVARA ILYVAQGTFG ECSSEAEVQS WMRYNTFLLL EVGTFNALVE 201 250 ENSTTRP00000015217/1-836 LLNMEIDNSA ACSSAVRKPA ISLADSTDLR VLLNIMYLIV ETVHQECEGD bmy_11921T0/1-964 LLNMEIDNSA ACSSAVRKPA ISLADSTDLR VLLNIMYLIV ETVHQECEGD ENSP00000358810/1-837 LLNMEIDNSA ACSSAVRKPA ISLADSTDLR VLLNIMYLIV ETVHQECEGD ENSBTAP00000027922/1-837 LLNMEIDNSA ACSSAVRKPA ISLADSTDLR VLLNIMYLIV ETVHQECEGD 251 300 ENSTTRP00000015217/1-836 KAEWRTMRQT FRAELGSPLY NSE-FAIMLF GMVNKFCSGH APHFPMKKVL bmy_11921T0/1-964 KAEWRTMRQT FRAELGSPLY NSEPFAIMLF GMVTKFCSGH APHFPMKKVL ENSP00000358810/1-837 KAEWRTMRQT FRAELGSPLY NNEPFAIMLF GMVTKFCSGH APHFPMKKVL ENSBTAP00000027922/1-837 KAEWRTMRQT FRAELGSPLY NNEPFAIMLF GMVTKFCSGH APHFPMKKVL 301 350 ENSTTRP00000015217/1-836 LLLWKTVL-- ---------- ---------- ---------- ---------- bmy_11921T0/1-964 LLLWKTVLLV KGWVQESGLA STLGLGAIVS SQAQAKAGAL PSRRNDLGRQ ENSP00000358810/1-837 LLLWKTVL-- ---------- ---------- ---------- ---------- ENSBTAP00000027922/1-837 LLLWKTVL-- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000015217/1-836 ---------- ---------- ---------- ---------- ---------- bmy_11921T0/1-964 RSWSLDSCSS WDSRSPLSEG ASSVEPGLSE IWVTVSQMLL SLTQGPAYGH ENSP00000358810/1-837 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000027922/1-837 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000015217/1-836 ---------- -CTLGGFEEL QSMKAEKRAI LGLPPLPEDS IKVIRNMRAA bmy_11921T0/1-964 VVPAPRLSVT QCTLGGFEEL QSMKAEKRAI LGLPPLPEDS IKVIRNMRAA ENSP00000358810/1-837 ---------- -CTLGGFEEL QSMKAEKRSI LGLPPLPEDS IKVIRNMRAA ENSBTAP00000027922/1-837 ---------- -CTLGGFEEL QSMKAEKRAI LGLPPLPEDS IKVIRNMRAA 451 500 ENSTTRP00000015217/1-836 SPPASASDLI EQQQKRGRRE HKALIKQDNL DAFNERDPYK ADDSREEEEE bmy_11921T0/1-964 SPPASASDLI EQQQKRGRRE HKALIKQDNL DAFNERDPYK ADDSREEEEE ENSP00000358810/1-837 SPPASASDLI EQQQKRGRRE HKALIKQDNL DAFNERDPYK ADDSREEEEE ENSBTAP00000027922/1-837 SPPASASDLI EQQQKRGRRE HKALIKQDNL DAFNERDPYK ADDSREEEEE 501 550 ENSTTRP00000015217/1-836 NDDDSSLEGE TFPLERDEVM PPPLQHPQTD RLTCPKGLPW APKV------ bmy_11921T0/1-964 NDDDNSLEGE AFPLERDEVM PPPLQHPQTD RLTCPKGLPW APKITCKKAA ENSP00000358810/1-837 NDDDNSLEGE TFPLERDEVM PPPLQHPQTD RLTCPKGLPW APKV------ ENSBTAP00000027922/1-837 NDDDNSLEGE TFPLERDEVM PPPLQHPQTD RLTCPKGLPW APKV------ 551 600 ENSTTRP00000015217/1-836 -----REKDI EVFLESSRSK FIGYTLGSDT NTVVGLPRPI HESIKTLKQH bmy_11921T0/1-964 VFSFGREKDI EVFLESSRSK FIGYTLGSDT NTVVGLPRPI HESIKTLKQH ENSP00000358810/1-837 -----REKDI EMFLESSRSK FIGYTLGSDT NTVVGLPRPI HESIKTLKQH ENSBTAP00000027922/1-837 -----REKDI EMFLESSRSK FIGYTLGSDT NTVVGLPRPI HESIKTLKQH 601 650 ENSTTRP00000015217/1-836 KYTSIAEVQA QMEEEYLRSP LSGGEEEVEQ VPAETLYQGL LPSLPQYMIA bmy_11921T0/1-964 KYTSIAEVQA QMEEEYLRSP LSGGEEEVEQ VPAETLYQGL LPSLPQYMIA ENSP00000358810/1-837 KYTSIAEVQA QMEEEYLRSP LSGGEEEVEQ VPAETLYQGL LPSLPQYMIA ENSBTAP00000027922/1-837 KYTSIAEVQA QMEEEYLRSP LSGGEEEVEQ VPAETLYQGL LPSLPQYMIA 651 700 ENSTTRP00000015217/1-836 LLKILLAAAP TSKAKTDSIN ILADVLPEEM PTTVLQSMKL GVDVNRHKEV bmy_11921T0/1-964 LLKILLAAAP TSKAKTDSIN ILADVLPEEM PTTVLQSMKL GVDVNRHKEV ENSP00000358810/1-837 LLKILLAAAP TSKAKTDSIN ILADVLPEEM PTTVLQSMKL GVDVNRHKEV ENSBTAP00000027922/1-837 LLKILLAAAP TSKAKTDSIN ILADVLPEEM PTTVLQSMKL GVDVNRHKEV 701 750 ENSTTRP00000015217/1-836 IVKAISAVLL LLLKHFKLNH VYQFEYMAQH LVFANCIPLI LKFFNQNIMS bmy_11921T0/1-964 IVKAISAVLL LLLKHFKLNH VYQFEYMAQH LVFANCIPLI LKFFNQNIMS ENSP00000358810/1-837 IVKAISAVLL LLLKHFKLNH VYQFEYMAQH LVFANCIPLI LKFFNQNIMS ENSBTAP00000027922/1-837 IVKAISAVLL LLLKHFKLNH VYQFEYMAQH LVFANCIPLI LKFFNQNIMS 751 800 ENSTTRP00000015217/1-836 YITAKNXXXX XXXXXXXXXX XXXXXXXXXX AGDNNQLCWR NLFSCINLLR bmy_11921T0/1-964 YITAKNSISV LDYPQCVVHE LPELTAESLE AGDNNQFCWR NLFSCINLLR ENSP00000358810/1-837 YITAKNSISV LDYPHCVVHE LPELTAESLE AGDSNQFCWR NLFSCINLLR ENSBTAP00000027922/1-837 YITAKNSISV LDYPHCVVHE LPELTAESLE AGDNNQFCWR NLFSCINLLR 801 850 ENSTTRP00000015217/1-836 ILNKLTKWKH SRTMMLVVFK SAPILKRALK VKQAMMQLYV LKLLKVQTKY bmy_11921T0/1-964 ILNKLTKWKH SRTMMLVVFK SAPILKRALK VKQAMMQLYV LKLLKVQTKY ENSP00000358810/1-837 ILNKLTKWKH SRTMMLVVFK SAPILKRALK VKQAMMQLYV LKLLKVQTKY ENSBTAP00000027922/1-837 ILNKLTKWKH SRTMMLVVFK SAPILKRALK VKQAMMQLYV LKLLKVQTKY 851 900 ENSTTRP00000015217/1-836 LGRQWRKSNM KTMSAIYQKV RHRLNDDWAY GNDLDARPWD FQAEECALRA bmy_11921T0/1-964 LGRQWRKSNM KTMSAIYQKV RHRLNDDWAY GNDLDARPWD FQAEECALRA ENSP00000358810/1-837 LGRQWRKSNM KTMSAIYQKV RHRLNDDWAY GNDLDARPWD FQAEECALRA ENSBTAP00000027922/1-837 LGRQWRKSNM KTMSAIYQKV RHRLNDDWAY GNDLDARPWD FQAEECALRA 901 950 ENSTTRP00000015217/1-836 NIERFNARRY DRVHSNPDFL PVDNCLQSVL GQRVDLPEDF QMNYDLWLER bmy_11921T0/1-964 NIERFNARRY DRVHSNPDFL PVDNCLQSVL GQRVDLPEDF QMNYDLWLER ENSP00000358810/1-837 NIERFNARRY DRAHSNPDFL PVDNCLQSVL GQRVDLPEDF QMNYDLWLER ENSBTAP00000027922/1-837 NIERFNARRY DRAHSNPDFL PVDNCLQSVL GQRVDLPEDF QMNYDLWLER 951 1000 ENSTTRP00000015217/1-836 EVFSKPISWE ELLQ bmy_11921T0/1-964 EVFSKPISWE ELLQ ENSP00000358810/1-837 EVFSKPISWE ELLQ ENSBTAP00000027922/1-837 EVFSKPISWE ELLQ