KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:18 2014 Check: 00 .. Name: ENSP00000358807/1-343 Len: 343 Check: 7724 Weight: 1.00 Name: ENSBTAP00000027924/1-343 Len: 343 Check: 9002 Weight: 1.00 Name: bmy_11923T0/1-269 Len: 343 Check: 5972 Weight: 1.00 Name: BACU020401/1-250 Len: 343 Check: 9847 Weight: 1.00 Name: ENSTTRP00000015219/1-250 Len: 343 Check: 9379 Weight: 1.00 // 1 50 ENSP00000358807/1-343 MDPEHCAPFR VGPAPGPYVA SGDEPPGPQG TPAAAPHLHP APPRGPRLTR ENSBTAP00000027924/1-343 MDPERCAPFG VGPGPGPYAA AGDEPPGPQG TPAAASHLHP APPRGPRLTR bmy_11923T0/1-269 ---------M AGPA-----A SMDAMHGASG APA------- ---------- BACU020401/1-250 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015219/1-250 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000358807/1-343 FPACGPLEPY LPEPAKPPAK YLQDLGPGPA LNGGHFYEGP AEAEEKTSKA ENSBTAP00000027924/1-343 FPACGPLEPY LPEPAKPPAK YLQDLGPGPA LNGGHFYESP EEAEEKASKA bmy_11923T0/1-269 ---------- ---------- ---------- ---------- ---EEKASKA BACU020401/1-250 ---------- ---------- ---------- ---------- ---EEKASKA ENSTTRP00000015219/1-250 ---------- ---------- ---------- ---------- ---EEKASKA 101 150 ENSP00000358807/1-343 ASFPQLPLDC RGGPRDGPSN LQGSPGPCLA SLHLPLSPGL PDSMELAKNK ENSBTAP00000027924/1-343 ASFPQLPLDC RGGPRDGTSN LPGSPGPCLA SLRVPLSPGL PDSVELAKNK bmy_11923T0/1-269 ASFPQLPLDC RGGPRDGPSN LPGSPGPCLA SLRVPLSPGL PDSMELAKNK BACU020401/1-250 ASFPQLPLDC RGGPRDGPSN LPGSPGPCLA SLRVPLSPGL PDSMELAKNK ENSTTRP00000015219/1-250 ASFPQLPLDC RGGPRDGPSN LPGSPGPCLA GLRVPLSPGL PDSMELAKNK 151 200 ENSP00000358807/1-343 SKKRRNRTTF STFQLEELEK VFQKTHYPDV YAREQLALRT DLTEARVQVW ENSBTAP00000027924/1-343 SKKRRNRTTF STFQLEELEK VFQKTHYPDV YAREQLAVRT DLTEARVQVW bmy_11923T0/1-269 SKKRRNRTTF STFQLEELEK VFQKTHYPDV YAREQLALRT DLTEARVQVW BACU020401/1-250 SKKRRNRTTF STFQLEELEK VFQKTHYPDV YAREQLALRT DLTEARVQVW ENSTTRP00000015219/1-250 SKKRRNRTTF STFQLEELEK VFQKTHYPDV YAREQLALRT DLTEARVQVW 201 250 ENSP00000358807/1-343 FQNRRAKWRK RERYGKIQEG RNPFTAAYDI SVLPRTDSHP QLQNSLWASP ENSBTAP00000027924/1-343 FQNRRAKWRK RERYGKIQEG RNPFTSAYDI SMLPRTDSHP QLQNSLWPSS bmy_11923T0/1-269 FQNRRAKWRK RERYGKIQEG RNPFTSAYDI SMLPRTDSHP QLQNSLWPSP BACU020401/1-250 FQNRRAKWRK RERYGKIQEG RNPFTSAYDI SMLPRTDSHP QLQNSLWPSP ENSTTRP00000015219/1-250 FQNRRAKWRK RERYGKIQEG RNPFTSAYDI SMLPRTDSHP QLQNSLWPSP 251 300 ENSP00000358807/1-343 GSGSPGGPCL VSPEGIPSPC MSPYSHPHGS VAGFMGVPAP SAAHPGIYSI ENSBTAP00000027924/1-343 GSGSPGGPCL VSPEGVPSPC MSPYSHPHGN VAGFMGVPTS PGAHPGIYSI bmy_11923T0/1-269 GSGSPRGPCL MSPEGIPSPC MSPYSHSHGN VAGFMGVPAS PGAHPGIYSI BACU020401/1-250 GSGSPRGPCL MSPEGIPSPC MSPYSHSHGN VAGFMGVPAS PGAHPGIYSI ENSTTRP00000015219/1-250 GSGSPRGPCL MSPEGIPSPC MSPYSHSHGN VAGFMGVPAS PGAHPGIYSI 301 350 ENSP00000358807/1-343 HGFPPTLGGH SFEPSSDGDY KSPSLVSLRV KPKEPPGLLN WTT ENSBTAP00000027924/1-343 HGFSPALGGH SFEPSPDGDY KSPSLISLRV KPKEPPSLLN WTT bmy_11923T0/1-269 HGFSPALGGP SFEPSPDGDY KSPSLISLRV KSKEPPSLLN WTT BACU020401/1-250 HGFSPALGGP SFEPSPDGDY KSPSLISLRV KSKEPPSLLN WTT ENSTTRP00000015219/1-250 HGFSPALGGP SFEPSPDGDY KSPSLISLRV KSKEPPSLLN WTT