KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:21 2014 Check: 00 .. Name: BACU002212/1-184 Len: 264 Check: 3009 Weight: 1.00 Name: bmy_06373T0/1-209 Len: 264 Check: 3222 Weight: 1.00 Name: ENSP00000246792/1-218 Len: 264 Check: 1140 Weight: 1.00 Name: ENSTTRP00000005211/1-218 Len: 264 Check: 1847 Weight: 1.00 Name: ENSBTAP00000027944/1-218 Len: 264 Check: 2877 Weight: 1.00 // 1 50 BACU002212/1-184 --MGRDRDPE RGRQTQKRGR DPEGGGPRKS GLRGRATSPL L----GHCSK bmy_06373T0/1-209 MSSGAASGTG RGR------- -PRGGGPGPG DPPPSETHKL VVVGGGGVGK ENSP00000246792/1-218 MSSGAASGTG RGR------- -PRGGGPGPG DPPPSETHKL VVVGGGGVGK ENSTTRP00000005211/1-218 MSSGAASGTG RGR------- -PRGGGPGPG DPPPSETHKL VVVGGGGVGK ENSBTAP00000027944/1-218 MSSGAASGTG RGR------- -PRGGVPGPG DPPPSETHKL VVVGGGGVGK 51 100 BACU002212/1-184 GVLFPPH-QS YFVSDYDPTI EDSYTKICMV DGVPARLDSE GGRGDGGRGS bmy_06373T0/1-209 SALTIQFIQS YFVSDYDPTI EDSYTKICMV DGVPARLD-- ---------- ENSP00000246792/1-218 SALTIQFIQS YFVSDYDPTI EDSYTKICSV DGIPARLD-- ---------- ENSTTRP00000005211/1-218 SALTIQFIQS YFVSDYDPTI EDSYTKICMV DGVPARLD-- ---------- ENSBTAP00000027944/1-218 SALTIQFIQS YFVSDYDPTI EDSYTKICTV DGVPARLD-- ---------- 101 150 BACU002212/1-184 GRAEGFGGGG GWREPRPHRG PSPLPAVLDT AGQEEFGAMR EQYMRAGHGF bmy_06373T0/1-209 ---------- ---------- ------ILDT AGQEEFGAMR EQYMRAGHGF ENSP00000246792/1-218 ---------- ---------- ------ILDT AGQEEFGAMR EQYMRAGHGF ENSTTRP00000005211/1-218 ---------- ---------- ------ILDT AGQEEFGAMR EQYMRAGHGF ENSBTAP00000027944/1-218 ---------- ---------- ------ILDT AGQEEFGAMR EQYMRAGHGF 151 200 BACU002212/1-184 LLVFAINDRQ S--------- ---------- ---------- ---------- bmy_06373T0/1-209 LLVFAINDRQ SFNEVGKLFT QILRVKDRDD TP-------- -PPCRRRLDS ENSP00000246792/1-218 LLVFAINDRQ SFNEVGKLFT QILRVKDRDD FPVVLVGNKA DLESQRQVPR ENSTTRP00000005211/1-218 LLVFAINDRQ SFNEVGKLFT QILRVKDRDD FPIVLVGNKA DLETQRQVPR ENSBTAP00000027944/1-218 LLVFAINDRQ SFNEVGKLFT QILRVKDRDD FPVVLVGNKA DLETQRQVPR 201 250 BACU002212/1-184 -------ASH HVAYFEASAK LRLNVDEAFE QLVRAVR--- ---------- bmy_06373T0/1-209 ISVWEAPSGA PPETPHASAK LRLNVDEAFE QLVRAVRKYQ EQELPPCPPS ENSP00000246792/1-218 SEASAFGASH HVAYFEASAK LRLNVDEAFE QLVRAVRKYQ EQELPPSPPS ENSTTRP00000005211/1-218 SEASTFSASH HVAYFEASAK LRLNVDEAFE QLVRAVRKYQ EQELPPCPPS ENSBTAP00000027944/1-218 SEASTFSASH HVAYFEASAK LRLNVDEAFE QLVRAVRKYQ EQELPPSPPS 251 300 BACU002212/1-184 ---------- ---- bmy_06373T0/1-209 APRKKDGGCP CVLL ENSP00000246792/1-218 APRKKGGGCP CVLL ENSTTRP00000005211/1-218 APRKKDGGCP CVLL ENSBTAP00000027944/1-218 APRKKAGGCP CVLL