KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:23 2014 Check: 00 .. Name: ENSTTRP00000000935/1-454 Len: 457 Check: 4348 Weight: 1.00 Name: bmy_20196T0/1-414 Len: 457 Check: 7861 Weight: 1.00 Name: ENSP00000318297/1-456 Len: 457 Check: 9393 Weight: 1.00 Name: BACU007928/1-456 Len: 457 Check: 9045 Weight: 1.00 Name: ENSBTAP00000027964/1-456 Len: 457 Check: 9071 Weight: 1.00 // 1 50 ENSTTRP00000000935/1-454 MKIEEVKSTT KTQRIASHSH VKGLGLDESG LAKQAASGLV GQENAREAC- bmy_20196T0/1-414 MKIEEVKSTT KTQRIASHSH VKGLGWTRAA WPSRRPRGSW AR-RTRARCG ENSP00000318297/1-456 MKIEEVKSTT KTQRIASHSH VKGLGLDESG LAKQAASGLV GQENAREAC- BACU007928/1-456 MKIEEVKSTT KTQRIASHSH VKGLGLDESG LAKQAASGLV GQENAREAC- ENSBTAP00000027964/1-456 MKIEEVKSTT KTQRIASHSH VKGLGLDESG LAKQAASGLV GQENAREAC- 51 100 ENSTTRP00000000935/1-454 GVIVELIKSK KMAGRAVLLA GPPGTGKTAL ALAIAQELGS KVPFCPMVGS bmy_20196T0/1-414 GMWCD----- ---------- ---------S GINQKQENGW KS--C-LVGR ENSP00000318297/1-456 GVIVELIKSK KMAGRAVLLA GPPGTGKTAL ALAIAQELGS KVPFCPMVGS BACU007928/1-456 GVIVELIKSK KMAGRAVLLA GPPGTGKTAL ALAIAQELGS KVPFCPMVGS ENSBTAP00000027964/1-456 GVIVELIKSK KMAGRAVLLA GPPGTGKTAL ALAIAQELGS KVPFCPMVGS 101 150 ENSTTRP00000000935/1-454 EVYSTEIKKT EVLMENFRRA IGLRIKETKE VYEGEVXXXX XXXXXXXXXX bmy_20196T0/1-414 ASWNWQ---- ---------- -GLRIKETKE VYEGEVTELT PCETENPMGG ENSP00000318297/1-456 EVYSTEIKKT EVLMENFRRA IGLRIKETKE VYEGEVTELT PCETENPMGG BACU007928/1-456 EVYSTEIKKT EVLMENFRRA IGLRIKETKE VYEGEVTELT PCETENPMGG ENSBTAP00000027964/1-456 EVYSTEIKKT EVLMENFRRA IGLRIKETKE VYEGEVTELT PCETENPMGG 151 200 ENSTTRP00000000935/1-454 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_20196T0/1-414 YGKTISHVII GLKTAKGTKQ LKLDPSIFES LQKERVEAGD VIYIEANSGA ENSP00000318297/1-456 YGKTISHVII GLKTAKGTKQ LKLDPSIFES LQKERVEAGD VIYIEANSGA BACU007928/1-456 YGKTISHVII GLKTAKGTKQ LKLDPSIFES LQKERVEAGD VIYIEANSGA ENSBTAP00000027964/1-456 YGKTISHVII GLKTAKGTKQ LKLDPSIFES LQKERVEAGD VIYIEANSGA 201 250 ENSTTRP00000000935/1-454 XXXXXXXXXX XXXXXXXXXX XXPLPKGDVH KKKEIIQDVT LHDLDVANAR bmy_20196T0/1-414 VKRQGRCDTY ATEFDLEAEE YVPLPKGDVH KKKEIIQDVT LHDLDVANAR ENSP00000318297/1-456 VKRQGRCDTY ATEFDLEAEE YVPLPKGDVH KKKEIIQDVT LHDLDVANAR BACU007928/1-456 VKRQGRCDTY ATEFDLEAEE YVPLPKGDVH KKKEIIQDVT LHDLDVANAR ENSBTAP00000027964/1-456 VKRQGRCDTY ATEFDLEAEE YVPLPKGDVH KKKEIIQDVT LHDLDVANAR 251 300 ENSTTRP00000000935/1-454 PQG--DILSM MGXXXXXXXX XXXXKLRGEI NKVVNKYIDQ GVAELVPGVL bmy_20196T0/1-414 PQGGQDILSM MGQLMKPKKT EITDKLRGEI NKVVNKYIDQ GVAELVPGVL ENSP00000318297/1-456 PQGGQDILSM MGQLMKPKKT EITDKLRGEI NKVVNKYIDQ GIAELVPGVL BACU007928/1-456 PQGGQDILSM MGQLMKPKKT EITDKLRGEI NKVVNKYIDQ GVAELVPGVL ENSBTAP00000027964/1-456 PQGGQDILSM MGQLMKPKKT EITDKLRGEI NKVVNKYIDQ GVAELVPGVL 301 350 ENSTTRP00000000935/1-454 FVDEVHMLDI ECFTYLHRAL ESSIAPIVIF ASNRGNCVIR GTEDIASPHG bmy_20196T0/1-414 FVDEVHMLDI ECFTYLHRAL ESSIAPIVIF ASNRGNCVIR GTEDITSPHG ENSP00000318297/1-456 FVDEVHMLDI ECFTYLHRAL ESSIAPIVIF ASNRGNCVIR GTEDITSPHG BACU007928/1-456 FVDEVHMLDI ECFTYLHRAL ESSIAPIVIF ASNRGNCVIR GTEDITSPHG ENSBTAP00000027964/1-456 FVDEVHMLDI ECFTYLHRAL ESSIAPIVIF ASNRGNCVIR GTEDVTSPHG 351 400 ENSTTRP00000000935/1-454 IPLDLLDRVM IIRATLYTPQ EMKQXXXXXX XXXXXXXXXX XXXXXXXXXT bmy_20196T0/1-414 IPLDLLDRVM IIRTMLYTPQ EMKQIIKIRA QTEGINISEE ALNHLGEIGT ENSP00000318297/1-456 IPLDLLDRVM IIRTMLYTPQ EMKQIIKIRA QTEGINISEE ALNHLGEIGT BACU007928/1-456 IPLDLLDRVM IIRTMLYTPQ EMKQIIKIRA QTEGINISEE ALNHLGEIGT ENSBTAP00000027964/1-456 IPLDLLDRVM IIRTMLYTPQ EMKQIIKIRA QTEGINISEE ALNHLGEIGT 401 450 ENSTTRP00000000935/1-454 KTTLRYAVQL LTPANLLAKI NGKDGIEKEH VEEISELFYD AKSSAKILAD bmy_20196T0/1-414 KTTLRYAVQL LTPANLLAKI NGKDGIEKEH VEEISELFYD AKSSAKILAD ENSP00000318297/1-456 KTTLRYSVQL LTPANLLAKI NGKDSIEKEH VEEISELFYD AKSSAKILAD BACU007928/1-456 KTTLRYAVQL LTPANLLAKI NGKDGIEKEH VEEISELFYD AKSSAKILAD ENSBTAP00000027964/1-456 KTTLRYAVQL LTPANLLAKI NGKDGIEKEH VEEISELFYD AKSSAKILAD 451 500 ENSTTRP00000000935/1-454 QQDKYMK bmy_20196T0/1-414 QQDKYMK ENSP00000318297/1-456 QQDKYMK BACU007928/1-456 QQDKYMK ENSBTAP00000027964/1-456 QQDKYMK