KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:29 2014 Check: 00 .. Name: ENSP00000245810/1-156 Len: 222 Check: 7120 Weight: 1.00 Name: ENSBTAP00000027984/1-156 Len: 222 Check: 9274 Weight: 1.00 Name: ENSTTRP00000009810/1-153 Len: 222 Check: 2244 Weight: 1.00 Name: BACU002573/1-189 Len: 222 Check: 4406 Weight: 1.00 Name: bmy_06920T0/1-181 Len: 222 Check: 2777 Weight: 1.00 // 1 50 ENSP00000245810/1-156 MAVGKFLLGS LLLLSLQLGQ GWGPDARGVP VADGEFSSEQ VAKAGGTWLG ENSBTAP00000027984/1-156 MATGRVLLGS LLLLILRLDF GGSQGAWEAL VAERELSSEP AVDR-----E ENSTTRP00000009810/1-153 MATGRVLLGS LLLLTLHLDL RGGPGAWGAS VAEEELLSEP VVDR-----G BACU002573/1-189 MATGRVLLGS LLLLILHLDL RGGPGAWGAL VGEEELLSEP VVER-----G bmy_06920T0/1-181 MATGRVLLGS LLLLILHLDL RGGPGAWGAS VAEEELLSEP VVDR-----G 51 100 ENSP00000245810/1-156 THRP------ ---------- ---------- ----LARLRR ALSGPCQLWS ENSBTAP00000027984/1-156 TQRPQLGKD- ---------- ---------- ----WARLRR ALTSPCQLWS ENSTTRP00000009810/1-153 TWRPQL---- ---------- ---------- ----GTRPRR ALAGPCQLWS BACU002573/1-189 TRRPQL---- ---------- ---------- ----GARPRR ALAGPCQLWS bmy_06920T0/1-181 IRRPQLGKDP QNPVRSPTPA RPDPARSQLP LVPAGARPRR ALAGPCQLWS 101 150 ENSP00000245810/1-156 LTLSVAELGL GYASEEKVIF RYCAGSCPRG ARTQHGLALA RLQGQGRAHG ENSBTAP00000027984/1-156 LSLPVAELGL GYTSEETVIF RYCAGSCPRG ARTQHGLTLA RLQGQGRAHG ENSTTRP00000009810/1-153 LPLPVAELGL GYTSEETVIF RYCAGSCPRG ARTQHGLTLA RLRGQGRAHG BACU002573/1-189 LPLPVAELGL GYTSEETVIF RYCAGSCPRG ARTQHGLTLA RLRGQGRAHG bmy_06920T0/1-181 LPLPVAELGL GYTSEETVIF RYCAGSCPRG ARTQHGLTLA RLRGQGRAHG 151 200 ENSP00000245810/1-156 GPCCRPTRYT DVAFLDDRHR ---------- ---------- ---------- ENSBTAP00000027984/1-156 GPCCRPTRYA DVTFLDDHHR ---------- ---------- ---------- ENSTTRP00000009810/1-153 GPCCRPTRYA DVAFLDDRHR ---------- ---------- ---------- BACU002573/1-189 GPCCRPTRYA DVAFLDDRHR WQRLPPPPAG XXXXXXXXXX XXXXXXXXXX bmy_06920T0/1-181 GPCCRPTRYA DVAFLDDRHR ---------- ---------- ---------- 201 250 ENSP00000245810/1-156 ------WQRL PQLSAAACGC GG ENSBTAP00000027984/1-156 ------WQRL PQLSAAACGC SG ENSTTRP00000009810/1-153 ------WQRL PQLSAAACGC GG BACU002573/1-189 XXXXHRWQRL PQLSAAACGC GG bmy_06920T0/1-181 ------WQRL PQLSAAACGC GG