KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:39 2014 Check: 00 .. Name: ENSTTRP00000011795/1-381 Len: 407 Check: 1896 Weight: 1.00 Name: bmy_00879T0/1-234 Len: 407 Check: 8016 Weight: 1.00 Name: ENSP00000349594/1-383 Len: 407 Check: 8668 Weight: 1.00 Name: ENSBTAP00000028031/1-366 Len: 407 Check: 7294 Weight: 1.00 Name: BACU000282/1-359 Len: 407 Check: 41 Weight: 1.00 // 1 50 ENSTTRP00000011795/1-381 ---------- ----MEWGLM IISTMEPQVS NGPTSNTSNG PSSNNRNCPS bmy_00879T0/1-234 ---------- ---------- ---------- ---------- ---------- ENSP00000349594/1-383 MRLLLLREIV INESRNCSFM IISTMEPQVS NGPTSNTSNG PSSNNRNCPS ENSBTAP00000028031/1-366 ---------- -------MVM IISTMEPQVS NGPTSNTSNG PSSNNRNCPS BACU000282/1-359 ---------- ---------- ----MEPQVS NGPTSNTSNG PSSNNRNCPS 51 100 ENSTTRP00000011795/1-381 PMQTGAATDD SKTNLIVNYL PQNMTQEEFR SLFGSIGEIE SCKLVRDKIT bmy_00879T0/1-234 ---------- ---------- ---------- ---------- ---------- ENSP00000349594/1-383 PMQTGATTDD SKTNLIVNYL PQNMTQEEFR SLFGSIGEIE SCKLVRDKIT ENSBTAP00000028031/1-366 PMQTGAATDD SKTNLIVNYL PQNMTQEEFR SLFGSIGEIE SCKLVRDKIT BACU000282/1-359 PMQTGAATDD SKTNLIVNYL PQNMTQEEFR SLFGSIGEIE SCKLVRDKIT 101 150 ENSTTRP00000011795/1-381 GQSLGYGFVN YIDPKDAEKA INTLNGLRLQ TKTIKXXXXX XXXXXXXXXX bmy_00879T0/1-234 ---------- ---------- ---------- ---------- ---------- ENSP00000349594/1-383 GQSLGYGFVN YIDPKDAEKA INTLNGLRLQ TKTIKVSYAR PSSASIRDAN ENSBTAP00000028031/1-366 GQSLGYGFVN YIDPKDAEKA INTLNGLRLQ TKTIKVSYAR PSSASIRDAN BACU000282/1-359 GQSLGYGFVN YIDPKDAEKA INTLNGLRLQ TKTIKVSYAR PSSASIRDAN 151 200 ENSTTRP00000011795/1-381 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00879T0/1-234 ---------M TQKELEQLFS QYGRIITSRI LVDQVTGVSR GVGFIRFDKR ENSP00000349594/1-383 LYVSGLPKTM TQKELEQLFS QYGRIITSRI LVDQVTGVSR GVGFIRFDKR ENSBTAP00000028031/1-366 LYVSGLPKTM TQKELEQLFS QYGRIITSRI LVDQVTGVSR GVGFIRFDKR BACU000282/1-359 LYVSGLPKTM TQKELEQLFS QYGRIITSRI LVDQVTGVSR GVGFIRFDKR 201 250 ENSTTRP00000011795/1-381 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00879T0/1-234 IEAEEAIKGL NGQKPSGATE PITVKFANNP SQKSSQALLS QLYQSPNRRY ENSP00000349594/1-383 IEAEEAIKGL NGQKPSGATE PITVKFANNP SQKSSQALLS QLYQSPNRRY ENSBTAP00000028031/1-366 IEAEEAIKGL NGQKPSGATE PITVKFANNP SQKSSQALLS QLYQSPNRRY BACU000282/1-359 IEAEEAIKGL NGQKPSGATE PITVKFANNP SQKSSQALLS QLYQSPNRRY 251 300 ENSTTRP00000011795/1-381 XXXXXXXXXX XXLDNLLNMA Y--------- -GVRXXXXXX XXXXXXXXXX bmy_00879T0/1-234 PGPLHHQAQR FRFGELSECS HKGVPDLVWK LNLG------ --------RF ENSP00000349594/1-383 PGPLHHQAQR FRLDNLLNMA Y--------- -GVK------ --------RF ENSBTAP00000028031/1-366 PGPLHHQAQR FRLDNLLNMA Y--------- -GVK------ --------RF BACU000282/1-359 PGPLHHQAQR FRLDNLLNMA Y--------- -GVK------ --------RF 301 350 ENSTTRP00000011795/1-381 XXXXXDGMTS LVGMNI-GHT GTGWCI-VYN LSHDSDESVL WQLFGPFGAV bmy_00879T0/1-234 SPITIDGMTS LVGMNIPGHT GTGWCIFVYN LSPDSDESVL WQLFGPFGAV ENSP00000349594/1-383 SPITIDGMTS LVGMNIPGHT GTGWCIFVYN LSPDSDESVL WQLFGPFGAV ENSBTAP00000028031/1-366 SPITIDGMTS LVGMNIPGHT GTGWCIFVYN LSPDSDESVL WQLFGPFGAV BACU000282/1-359 SPITIDGMTS LVGMNIPGHT GTGWCIFVYN LSPDSDESVL WQLFGPFGAV 351 400 ENSTTRP00000011795/1-381 NNVKVIRDFN TNKCKGFGFV TMTNYDEAAM AIASLNGYRL GDRVLQVSFK bmy_00879T0/1-234 NNVKVIRDFN TNKCKGFGFV TMTNYDEAAM AIASLNGYRL GDRVLQVSFK ENSP00000349594/1-383 NNVKVIRDFN TNKCKGFGFV TMTNYDEAAM AIASLNGYRL GDRVLQVSFK ENSBTAP00000028031/1-366 NNVKVIRDFN TNKCKGFGFV TMTNYDEAAM AIASLNGYRL GDRVLQVSFK BACU000282/1-359 NNVKVIRDFN TNKCKGFGFV TMTNYDEAAM AIASLNGYRL GDRVLQVSFK 401 450 ENSTTRP00000011795/1-381 TNKAHKS bmy_00879T0/1-234 TNKAHKS ENSP00000349594/1-383 TNKAHKS ENSBTAP00000028031/1-366 TNKAHKS BACU000282/1-359 TNKAHKS