KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:34:40 2014  Check: 00 ..

 Name: ENSP00000291934/1-177     Len:    210  Check:  6573  Weight:  1.00
 Name: ENSBTAP00000028044/1-180  Len:    210  Check:  7724  Weight:  1.00
 Name: ENSTTRP00000002276/1-172  Len:    210  Check:  3015  Weight:  1.00
 Name: bmy_16780T0/1-206         Len:    210  Check:  4900  Weight:  1.00
 Name: BACU009043/1-164          Len:    210  Check:  4468  Weight:  1.00

//


                          1                                                   50
ENSP00000291934/1-177     MLGCGIPALG LLLLLQGSA- ---------- ---------- ---------D 
ENSBTAP00000028044/1-180  MVGSGIPALG LLLLMQGSA- ---------- ---------- ---------D 
ENSTTRP00000002276/1-172  MVGSGIPALG LFLLMQGSV- ---------- ---------- ---------D 
bmy_16780T0/1-206         MVGSGIPALG LFLLMQGSVG EGADERVREL SRGPPHPPYS LPTPLFSFTD 
BACU009043/1-164          MVGSGIPALG LFLLMQGSV- ---------- ---------- ---------- 


                          51                                                 100
ENSP00000291934/1-177     GNGIQGFFYP WSCEGDIWDR ESCGGQAAID SPNLCLRLRC CYRNGVCYHQ 
ENSBTAP00000028044/1-180  GNGIQGFFYP WSCEGDVWDR ESCGGQAAIE NPNLCLRLRC CYRDGVCYHQ 
ENSTTRP00000002276/1-172  GNGIQGFFYP WSCEGDVWER ESCGGQVAIE NPNLCLRLRC CYRNGVCYHQ 
bmy_16780T0/1-206         GNGIQGFFYP WSCEGDVWDR ESCGGQAAIE NPNLCLRLRC CYRDGVCYHQ 
BACU009043/1-164          ---------- -GCEGDVWDR ESCGGQAAIE NPNLCLRLRC CYRDGVCYHQ 


                          101                                                150
ENSP00000291934/1-177     RPDENVRRKH MWALVWTCSG LLLLSCSICL FWWAKRRDVL HMPGFLAGPC 
ENSBTAP00000028044/1-180  RPDENMRRKH MWALGWTCGG LLFLITSICL FWWARRHDML RLPWFLKGKC 
ENSTTRP00000002276/1-172  RPDENMQRKH MWALGWMCGG LLFLISSICL FWWAKRRDML RLPWFMKGKC 
bmy_16780T0/1-206         RPDENMRRKH MWALGWTCGG LLFLISSICL FWWAKRRDML RLPWFLKGKC 
BACU009043/1-164          RPDENMRRKH MWALGWTCGG LLFLISSICL FWWAKRRDVL RLPWFLKGKC 


                          151                                                200
ENSP00000291934/1-177     DMSKSVSLLS KHRG--TKKT PSTGSV-PVA LSKESRDVEG GTEGEGTEEG 
ENSBTAP00000028044/1-180  DLSRTVSLLS KDRTPSEKKT PSVGSIPPAA PTEGALDVSG GTEGEGTEGG 
ENSTTRP00000002276/1-172  NLSQTVSLLP KHRA---KKM ASIGSM---- PTEGALDISG GTDEEGTEGG 
bmy_16780T0/1-206         NLSRTVSLLS KDRTLSKKKT ASIGSM---- PTEGALDVSG GTDGEGTEGG 
BACU009043/1-164          NLSGTVSLLS KDRTPSEKKT ASIGSM---- LTEGALDVSG GTDGEGTEGG 


                          201                                                250
ENSP00000291934/1-177     EETEGEEEED 
ENSBTAP00000028044/1-180  EETEGGDEDD 
ENSTTRP00000002276/1-172  -ETEAGEEED 
bmy_16780T0/1-206         EETEAGEEED 
BACU009043/1-164          EETEAGEEEE