KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:41 2014 Check: 00 .. Name: ENSP00000464050/1-938 Len: 969 Check: 4590 Weight: 1.00 Name: ENSTTRP00000006587/1-935 Len: 969 Check: 1199 Weight: 1.00 Name: ENSBTAP00000028046/1-946 Len: 969 Check: 716 Weight: 1.00 Name: bmy_17560T0/1-810 Len: 969 Check: 7045 Weight: 1.00 Name: BACU006129/1-923 Len: 969 Check: 2884 Weight: 1.00 // 1 50 ENSP00000464050/1-938 MNWNKGGPGT KRGFGFGGFA ISAGKKEEPK LPQQSHSAFG ATSSSSGFGK ENSTTRP00000006587/1-935 MNWNKGGPGT KRGFGFGGFA ISAGKKEEPK LPQQSHSAFG ATSS-SGFGK ENSBTAP00000028046/1-946 MNWNKGGPGT KRGFGFGGFA ISAGKKEEPK LPQQSHSAFG AASSASGFGK bmy_17560T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU006129/1-923 MNWNKGGPGT KRGFGFGGFA ISAGKKEEPK LPQQSHSAFG ATSS-SGFGK 51 100 ENSP00000464050/1-938 SAPPQLPSFY KIGSKRANFD EENAYFEDEE EDSSNVDLPY IPAENSPTRQ ENSTTRP00000006587/1-935 SAPPQLPSFY KIGSKRANFD EENAYFEDEE EDSSNVDLPY IPAENSPTRQ ENSBTAP00000028046/1-946 SAPPQLPSFY KIGSKRANFD EENAYFEDEE EDSSNVDLPY IPAENSPTRQ bmy_17560T0/1-810 ---------- ---------- ---------- ---------- ---------- BACU006129/1-923 SAPPQLPSFY KIGSKRANFD EENAYFEDEE EDSSNVDLPY IPXXTPPTRQ 101 150 ENSP00000464050/1-938 QFHSKPVDSD SDDDPLEAFM AEVEDQAARD MKRLEEKDKE RKNVKGIRDD ENSTTRP00000006587/1-935 QFHSKPVDSD SDDDPLEAFM AEVEDQAARD MKRLEEKDKE RKNVKGIRDD ENSBTAP00000028046/1-946 QFHSKPVDSD SDDDPLEAFM AEVEDQAARD MKRLEEKDKE RKNVKGIRDD bmy_17560T0/1-810 ---------- ---------- ---------- MKRLEEKDKE RKNVKGIRDD BACU006129/1-923 QFHSKPVDSD SDDDPLEAFM AEVE-ATARD MKRLEEKDKE RKNVKGIRDD 151 200 ENSP00000464050/1-938 IEEEDD---- ---------- QEAYFRYMAE NPTAGVVQEE EEDNLEYDSD ENSTTRP00000006587/1-935 IEEEDD---- ---------- QEAYFRYMAE NPTAGVVQEE EEDNLEYDSD ENSBTAP00000028046/1-946 IEEEDD---- ---------- QEAYFRYMAE NPTAGVVQEE EEDNLEYDSD bmy_17560T0/1-810 IEEEDDQLWD GEKGTRVSLS QEAYFRYMAE NPTAGVVQEE EEDNLEYDSD BACU006129/1-923 IEEEDD---- ---------- QEAYFRYMAE NPTAGVVQEE EEDNLEYDSD 201 250 ENSP00000464050/1-938 GNPIAPTKKI IDPLPPIDHS EIDYPPFEKN FYNEHEEITN LTPQQLIDLR ENSTTRP00000006587/1-935 GNPIAPSKKI IDPLPPIDHS EIDYPPFEKN FYNEHEEITN LTPQQLIDLR ENSBTAP00000028046/1-946 GNPIAPSKKI IDPLPPIDHS EIDYPPFEKN FYNEHEEITN LTPQQLIDLR bmy_17560T0/1-810 GNPIAPSKKI IDPLPPIDHS EIDYPPFEKN FYNEHEEITN LTPQQLIDLR BACU006129/1-923 GNPIAPSKKI IDPLPPIDHS EIDYPPFEKN FYNEHEEITN LTPQQLIDLR 251 300 ENSP00000464050/1-938 HKLNLRVSGA APPRPGSSFA HFGFDEQLMH QIRKSEYTQP TPIQCQGVPV ENSTTRP00000006587/1-935 HKLNLRVSGA APPRPGSSFA HFGFDEQLMH QIRKSEYTQP TPIQCQGVPV ENSBTAP00000028046/1-946 HKLNLRVSGA APPRPGSSFA HFGFDEQLMH QIRKSEYTQP TPIQCQGVPV bmy_17560T0/1-810 HKLNLRVSGA APPRPGSSFA HFGFDEQLMH QIRKSEYTQP TPIQCQGVPV BACU006129/1-923 HKLNLRVSGA APPRPGSSFA HFGFDEQLMH QIRKSEYTQP TPIQCQGVPV 301 350 ENSP00000464050/1-938 ALSGRDMIGI AKTGSGKTAA FIWPMLIHIM DQKELEPGDG PIAVIVCPTR ENSTTRP00000006587/1-935 ALSGRDMIGI AKTGSGKTAA FIWPMLIHIM DQKELEPGDG PIAVIVCPTR ENSBTAP00000028046/1-946 ALSGRDMIGI AKTGSGKTAA FIWPMLIHIM DQKELEPGDG PIAVIVCPTR bmy_17560T0/1-810 ALSGRDMIGI AKTGSGKTAA FIWPMLIHIM DQKELEPGDG PIAVIVCPTR BACU006129/1-923 ALSGRDMIGI AKTGSGKTAA FIWPMLIHIM DQKELEPGDG PIAVIVCPTR 351 400 ENSP00000464050/1-938 ELCQQIHAEC KRFGKAYNLR SVAVYGGGSM WEQAKALQEG AEIVVCTP-- ENSTTRP00000006587/1-935 ELCQQIHAEC KRFGKAYNLR SVAVYGGGSM WEQAKALQEG AEIVVCTP-- ENSBTAP00000028046/1-946 ELCQQIHAEC KRFGKAYNLR SVAVYGGGSM WEQAKALQEG AEIVVCTP-- bmy_17560T0/1-810 ELCQQIHAEC KRFGKAYNLR SVAVYGGGSM WEQAKALQEG AEIVVCTPVK BACU006129/1-923 ELCQQIHAEC KRFGKAYNLR SVAVYGGGSM WEQAKALQEG AEIVVCTP-- 401 450 ENSP00000464050/1-938 -GRLIDHVKK KATNLQRVSY LVFDEADRMF DMGFEYQVRS IASHVRPDRQ ENSTTRP00000006587/1-935 -GRLIDHVKK KATNLQRVSY LVFDEADRMF DMGFEYQVRS IASHVRPDRQ ENSBTAP00000028046/1-946 -GRLIDHVKK KATNLQRVSY LVFDEADRMF DMGFEYQVRS IASHVRPDRQ bmy_17560T0/1-810 NGSMHTESIK NQKGVQK--- ---------- -----YQVRS IASHVRPDRQ BACU006129/1-923 -GRLIDHVKK KATNLQRVSY LVFDEADRMF DMGF------ ---------- 451 500 ENSP00000464050/1-938 TLLFSATFRK KIEKLARDIL IDPIRVVQGD IGEANEDVTQ IVEILHSGPS ENSTTRP00000006587/1-935 TLLFSATFRK KIEKLARDIL IDPIRVVQGD IGEANEDVTQ IVEILHSGPS ENSBTAP00000028046/1-946 TLLFSATFRK KIEKLARDIL IDPIRVVQGD IGEANEDVTQ IVEILHSG-S bmy_17560T0/1-810 TLLFSATFRK KIEKLARDIL IDPIRVVQGD IGEANEDVTQ IVEILHSGPS BACU006129/1-923 ALLFSATFRK KIEKLARDIL IDPIRVVQGD IGEANEDVTQ IVEILHSGPS 501 550 ENSP00000464050/1-938 KWNWLTRRLV EFTSSGSVLL FVTKKANAEE LANNLKQEGH NLGLLHGDMD ENSTTRP00000006587/1-935 KWNWLTRRLV EFTSSGSVLL FVTKKANAEE LANNLKQEGH SLGLLHGDMD ENSBTAP00000028046/1-946 KWNWLTRRLV EFTSSGSVLL FVTKKANAEE LANNLKQEGH NLGLLHGDMD bmy_17560T0/1-810 KWNWLTRRLV EFTSSGSVLL FVTKKANAEE LANNLKQEGH DLGLLHGDMD BACU006129/1-923 KWNWLTRRLV EFTSSGSVLL FVTKKANAEE LANNLKQEGH NLGLLHGDMD 551 600 ENSP00000464050/1-938 QSERNKVISD FKKKDIPVLV ATDVAARGLD IPSIKTVINY DVARDIDTHT ENSTTRP00000006587/1-935 QSERNKVISD FKKKDIPVLV ATDVAARGLD IPSIKTVINY DVARDIDTHT ENSBTAP00000028046/1-946 QSERNKVISD FKKKDIPVLV ATDVAARGLD IPSIKTVINY DVARDIDTHT bmy_17560T0/1-810 QSERNKVISD FKKKDIPVLV ATDVAARGLD IPSIKTVINY DVARDIDTHT BACU006129/1-923 QSERNKVISD FKKKDIPVLV ATDVAARGLD IPSIKTVINY DVARDIDTHT 601 650 ENSP00000464050/1-938 HRIGRTGRAG EKGVAYTLLT PKDSNFAGDL VRNLEGANQH VSKELLDLAM ENSTTRP00000006587/1-935 HRIGRTGRAG EKGVAYTLLT PKDSNFAGDL VRNLEGANQH VSKELLDLAM ENSBTAP00000028046/1-946 HRIGRTGRAG EKGVAYTLLT PKDSNFAGDL VRNLEGANQH VSKELLDLAM bmy_17560T0/1-810 HRIGRTGRAG EKGVAYTLLT PKDSNFAGDL VRNLEGANQH VTKELLDLAM BACU006129/1-923 HRIGRTGRAG EKGVAYTLLT PKDSNFAGDL VRNLEGANQH VTKELLDLAM 651 700 ENSP00000464050/1-938 QNAWFRKSRF KGGKGKKLNI GGGGLGYRER PGLGSENMDR G-NNNVMSNY ENSTTRP00000006587/1-935 QNAWFRKSRF KGGKGKKLNI GGGGLGYRER PGLGSENTDR GSNNNVMSNY ENSBTAP00000028046/1-946 QNAWFRKSRF KGGKGKKLNI GGGGLGYRER PGLGSENSDR GSNNNVMSNY bmy_17560T0/1-810 QNAWFRKSRF KGGKGKKLNI GGGGLGYRER PGLGSENTDR GSNNNVMSNY BACU006129/1-923 QNAWFRKSRF KGGKGKKLNI GGGGLGYRER PGLGSENTDR GSNNNVMSNY 701 750 ENSP00000464050/1-938 EAYKPSTGAM GDRLTAMKAA FQSQYKSHFV AASLSNQKAG SSAAGASGWT ENSTTRP00000006587/1-935 EAYKPSTGAM GDRLTAMKAA FQSQYKSHFV AASLTNQKAG SSAAGASGWT ENSBTAP00000028046/1-946 EAYKPSTGAM GDRLTAMKAA FQSQYKSHFV AASLSNQKAG SSAAGASGWT bmy_17560T0/1-810 EAYKPSTGAM GDRLTAMKAA FQSQYKSHFV AASLTNQKAG SSAAGASGWT BACU006129/1-923 EAYKPSTGAM GDRLTAMKAA FQSQYKSHFV AASLTNQKAG SSAAGASGWT 751 800 ENSP00000464050/1-938 SAGSLNSVPT NSAQQ-GHNS PDSPVTSAAK GIPGFGNTGN ISGAPVTYPS ENSTTRP00000006587/1-935 SAGSLNSVPT NSAQQQGHNS PDSPIASATK GIPGFGSTGN LSSAPVTYPS ENSBTAP00000028046/1-946 SAGSLNSVPT NSAQQ-GHSS PDSPIASATK GIPGFGSPGN LSSAPVTYPS bmy_17560T0/1-810 SAGSLNSVPS SSAQQ-GRNS PDSPTSSATK GIPGFGSAGN LSSAPVTYPP BACU006129/1-923 SAGSLNSVPS SSAQQ-GRSS PDSPTSSAAK GIPGFGSAGN LSSAPVTYPP 801 850 ENSP00000464050/1-938 AGAQGVNNTA SGNNSREGTG GSNGKRERYT ENRGSSRHSH GETGNRHSDS ENSTTRP00000006587/1-935 AGAQGVNNTA SGNNGREGIG GGNGKRERYT ENRGGSRHSH GESGNRHGDS ENSBTAP00000028046/1-946 AGAPGVNNTA SGSNSREGTG GGNGKRERYT ENRGGSRHSH GESGNRHGDS bmy_17560T0/1-810 AGAQGVNNTA SGNNSREGIG GGNGKRERYT ENRGGSRHSH GESGNRHGDS BACU006129/1-923 AGAQGVNNTA SGNNSREGIG GGNGKRERYT ENRGGSRHSH GESGNRHGDS 851 900 ENSP00000464050/1-938 PRHGDGGR-- ----HGDGYR HPESSS---- --RHTDGHRH GENRHGGSAG ENSTTRP00000006587/1-935 PRHGDGGR-- ----HGEGYR YPESSS---- --RHADGHPH GENRHGGGGG ENSBTAP00000028046/1-946 PRHGDGGRHG DGGRHGDGYR YPESSSRHTD SRRHADGHPH GENRHGGGGG bmy_17560T0/1-810 PRHGDGAR-- ----HGEGYR YPESSSRHAD GRRHADGHPH GENRHGGGGG BACU006129/1-923 PRHGDGAR-- ----HGEGYR YPESSSRHAD GRRHADGHPH GENRHGGGGG 901 950 ENSP00000464050/1-938 RHGENRGAND GRNGESRKEA FNRESKMEPK MEPKVDSSKM DKVDSKTDKT ENSTTRP00000006587/1-935 RHGESRGAND GRNGESRKEI CNRES----K VDPKVDSTKM DKMDSKTDKT ENSBTAP00000028046/1-946 RHGESRGAND GRNGESRKES CNRES----K MDPKVDSPKV DKMDSKTDKT bmy_17560T0/1-810 RHGESRGAND GRNGESRKES CTRES----K MDPKVDSTKT DKTDSKTDKT BACU006129/1-923 RHGESRGAND GRNGESRKES CTRES----K MDPKVDSTKT DKMDSKTDKT 951 1000 ENSP00000464050/1-938 ADGFAVPEPP KRKKSRWDS ENSTTRP00000006587/1-935 TDGFAVPEPP KRKKSRWDS ENSBTAP00000028046/1-946 PDGFAVPEPP KRKKSRWDS bmy_17560T0/1-810 TDGFAVPEPP KRKKSRWDS BACU006129/1-923 TDGFAVPEPP KRKKSRWDS