KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:44 2014 Check: 00 .. Name: ENSTTRP00000007930/1-518 Len: 543 Check: 360 Weight: 1.00 Name: ENSP00000238936/1-517 Len: 543 Check: 8681 Weight: 1.00 Name: ENSBTAP00000028052/1-517 Len: 543 Check: 5331 Weight: 1.00 Name: bmy_15425T0/1-542 Len: 543 Check: 2029 Weight: 1.00 Name: BACU012362/1-517 Len: 543 Check: 7333 Weight: 1.00 // 1 50 ENSTTRP00000007930/1-518 MGLGGPWAWL LGLPTAMVYG SLALFISVLH NVFLLYYVDT FVSVYKINKA ENSP00000238936/1-517 MGLGQPQAWL LGLPTAVVYG SLALFTTILH NVFLLYYVDT FVSVYKINKM ENSBTAP00000028052/1-517 MRLGGPWAWL LGLPTAVVYG SLALFVSVLH NVFLLYYVDT FVSVYKIDKA bmy_15425T0/1-542 MGLGGPWAWL LGLPTAMVYG SLALFISVLH NVFLLYYVDT FVSVYKINKA BACU012362/1-517 MGLGGPWAWL LGLPTAMVYG SLALFISVLH NVFLLYYVDT FVSVYKINKA 51 100 ENSTTRP00000007930/1-518 AFWVGETVFL LWNSLNDPLF GWLSDRQFLS SQPRSGARLS SRAVVLARVR ENSP00000238936/1-517 AFWVGETVFL LWNSLNDPLF GWLSDRQFLS SQPRSGAGLS SRAVVLARVQ ENSBTAP00000028052/1-517 AFWVGETVFL LWNSLNDPLF GWLSDRQFLS SQPRSGAGLS SRAVVLARVR bmy_15425T0/1-542 AFWVGETVFL LWNSLNDPLF GWLSDRQFLS SQPRSGARLS SRAVVLARVR BACU012362/1-517 AFWVGETVFL LWNSLNDPLF GWLSDRQFLS SQPRSGARLS SRAVVLARVR 101 150 ENSTTRP00000007930/1-518 ALGWHGPLLA LSFLAFWVPW APAGLQFLLC LCLYDGFLTL VDLHHHALLA ENSP00000238936/1-517 ALGWHGPLLA LSFLAFWVPW APAGLQFLLC LCLYDGFLTL VDLHHHALLA ENSBTAP00000028052/1-517 ALGWHGPLLA LSFLAFWVPW APAGLQFLLC LCLYDGFLTL VDLHHHALLA bmy_15425T0/1-542 ALGWHGPLLA LSFLAFWVPW APAGLQFLLC LCLYDGFLTL VDLHHHALLA BACU012362/1-517 ALGWHGPLLA LSFLAFWVPW APAGLQFLLC LCLYDGFLTL VDLHHHALLA 151 200 ENSTTRP00000007930/1-518 DLALSAHDRT HLNFYCSLFS AAGSLSVFAS YAFWNKEDFS SFRAFCLALA ENSP00000238936/1-517 DLALSAHDRT HLNFYCSLFS AAGSLSVFAS YAFWNKEDFS SFRAFCVTLA ENSBTAP00000028052/1-517 DLALSAHDRT HLNFYCSLFS AAGSLSVFAS YAFWNKEDFS SFRAFCLALA bmy_15425T0/1-542 DLALSAHDRT HLNFYCSLFS AAGSLSVFAS YAFWNKEDFS SFRAFCLALA BACU012362/1-517 DLALSAHDRT HLNFYCSLFS AAGSLSVFAS YAFWNKEDFS SFRAFCLALA 201 250 ENSTTRP00000007930/1-518 AGSGLGFVGA TRLLRWRVEA ASREPGCPTL AVDGGLCEEE ELLLGGEETG ENSP00000238936/1-517 VSSGLGFLGA TQLLRRRVEA ARKDPGCSGL VVDSGLC-GE ELLVGSEEAD ENSBTAP00000028052/1-517 TGSGLGFVGA ARLLRRRVEA AGREPGCPAM AVNDGLC-EE ELLVGGEEAG bmy_15425T0/1-542 AGSGLGFVGA TRLLRWRVEA ASREPGCPTL AVDGGLC-EE ELLLGGEEAG BACU012362/1-517 AGSGLGFVGA TRLLRWRVEA ASREPGCPTL AVDGGLC-EE ELLLGGEEAG 251 300 ENSTTRP00000007930/1-518 SITLGQYLRQ LARHRNFLWF VGMDLVQVFH CHFNSNFFPL FLEHLLSDHI ENSP00000238936/1-517 SITLGRYLRQ LARHRNFLWF VSMDLVQVFH CHFNSNFFPL FLEHLLSDHI ENSBTAP00000028052/1-517 SITLGQYLQQ LARHRNFLWF VGMDLVQVFH CHFNSNFFPL FLEHLLSDHI bmy_15425T0/1-542 SITLGQYLRQ LARHRNFLWF VGMDLVQVFH CHFNSNFFPL FLEHLLSDHI BACU012362/1-517 SITLGQYLRQ LARHRNFLWF VGMDLVQVFH CHFNSNFFPL FLEHLLSDHI 301 350 ENSTTRP00000007930/1-518 SLSTGSFLLG ISYVAPHLNN LYFLPLCRRW GVYAVVRGLF LLKLGLSLLM ENSP00000238936/1-517 SLSTGSILLG LSYVAPHLNN LYFLSLCRRW GVYAVVRGLF LLKLGLSLLM ENSBTAP00000028052/1-517 SLSTGSFLLG ISYVAPHLNN LYFLPLCRRW GVYAVVRGLF LLKLGLSLLM bmy_15425T0/1-542 SLSTGSFLLG ISYVAPHLNN LYFLPLCRRW GVYAVVRGLF LLKLGLSLLM BACU012362/1-517 SLSTGSFLLG ISYVAPHLNN LYFLPLCRRW GVYAVVRGLF LLKLGLSLLM 351 400 ENSTTRP00000007930/1-518 LCAGPDRPGL LCLFIA---- ---------- ---------- -XXXXXXXXX ENSP00000238936/1-517 LLAGPDHLSL LCLFIA---- ---------- ---------- -SNRVFTEGT ENSBTAP00000028052/1-517 LLAGPDHPGL LCLFIA---- ---------- ---------- -SNRVFTEGT bmy_15425T0/1-542 LLAGPDRPGL LCLFIARYAL PSLIPTPLSH PFIFVCSLST GSNRVFTEGT BACU012362/1-517 LLAGPDRPGL LCLFIA---- ---------- ---------- -SNRVFTEGT 401 450 ENSTTRP00000007930/1-518 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000238936/1-517 CKLLTLVVTD LVDEDLVLNH RKQAASALLF GMVALVTKPG QTFAPLLGTW ENSBTAP00000028052/1-517 CKLLTLVVTD LVDEDLVLNH RKQAASALLF GMVALVTKPG QTFAPLLGTW bmy_15425T0/1-542 CKLLTLVVTD LVDEDLVLNH RKQAASALLF GMVALVTKPG QTFAPLLGTW BACU012362/1-517 CKLLTLVVTD LVDEDLVLNH RKQAASALLF GMVALVTKPG QTFAPLLGTW 451 500 ENSTTRP00000007930/1-518 XXXXXXXHDL FQQPALTPVG SAQPWPEPPA PPPPQAPTLR QGCFYLLVLV ENSP00000238936/1-517 LLCFYTGHDL FQQSLITPVG SAHPWPEPPA PAPAQAPTLR QGCFYLLVLV ENSBTAP00000028052/1-517 LLCFYTGHDL FQQHPPAPVG SAQPWPEPPA PPPAQAPPLR QGCFYLLVLV bmy_15425T0/1-542 LLCFYTGHDL FQQPALTPVG SAQPWPEPPA PPPPQAPTLR QGCFHLLVLV BACU012362/1-517 LLCFYTGHDL FQQPALTPVG SAQPWPEPPA PPPPQAPTLR QGCFYLLVLV 501 550 ENSTTRP00000007930/1-518 PLTCALLQLF TWSQFTLYGR RLHAVKAQRQ NLSRAQTLDI KMV ENSP00000238936/1-517 PITCALLQLF TWSQFTLHGR RLHMVKAQRQ NLSQAQTLDV KMV ENSBTAP00000028052/1-517 PIACALLQLF TWSQFTLHGR RLHMVKAQRQ SLSRAQTLDV KMV bmy_15425T0/1-542 PITCALLQLF TWSQFTLYGR RLHTVKAQRQ NLSRAQTLDV KTV BACU012362/1-517 PITCALLQLF TWSQFTLYGR RLHAVKAQRQ NLSRAQTLDV KMV