KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:45 2014 Check: 00 .. Name: ENSTTRP00000011962/1-548 Len: 572 Check: 6109 Weight: 1.00 Name: bmy_15429T0/1-537 Len: 572 Check: 8193 Weight: 1.00 Name: BACU012359/1-572 Len: 572 Check: 4225 Weight: 1.00 Name: ENSP00000302120/1-551 Len: 572 Check: 3879 Weight: 1.00 Name: ENSBTAP00000028059/1-551 Len: 572 Check: 3558 Weight: 1.00 // 1 50 ENSTTRP00000011962/1-548 MAENWKNCFE EELICPICLH VFVEPVQLPC KHNFCRGCIG EAWAKDSGLV bmy_15429T0/1-537 MAENWKNCFE EELICPICLH VFVEPVQLPC KHNFCRGCIG EAWAKDSGLV BACU012359/1-572 MAENWKNCFE EELICPICLH VFVEPVQLPC KHNFCRGCIG EAWAKDSGLV ENSP00000302120/1-551 MAENWKNCFE EELICPICLH VFVEPVQLPC KHNFCRGCIG EAWAKDSGLV ENSBTAP00000028059/1-551 MAENWKNCFE EELICPICLH VFVEPVQLPC KHNFCRGCIG EAWAKDSGLV 51 100 ENSTTRP00000011962/1-548 RCPECNQAYN QKPGLEKNLK LTNIVEKFNA LHVEKPPAAL HCVFCRRGPP bmy_15429T0/1-537 RCPECNQAYN QKPGLEKNLK LTNIVEKFNA LHVEKPPAAL HCVFCRRGPP BACU012359/1-572 RCPECNQAYN QKPGLEKNLK LTNIVEKFNA LHVEKPPAAL HCVFCRRGPP ENSP00000302120/1-551 RCPECNQAYN QKPGLEKNLK LTNIVEKFNA LHVEKPPAAL HCVFCRRGPP ENSBTAP00000028059/1-551 RCPECNQAYN QKPGLEKNLK LTNIVEKFNA LHVEKPPAAL HCVFCRRGPP 101 150 ENSTTRP00000011962/1-548 LPAQKVCLRC EAPCCQSHVQ THLQQPSTAR GHLLVEADDV RAWSCPQHNA bmy_15429T0/1-537 LPAQKVCLRC EAPCCQSHVQ THLQQPSTAR GHLLVEADDV RAWSCPQHNA BACU012359/1-572 LPAQKVCLRC EAPCCQSHVQ THLQQPSTAR GHLLVEADDV RAWSCPQHNA ENSP00000302120/1-551 LPAQKVCLRC EAPCCQSHVQ THLQQPSTAR GHLLVEADDV RAWSCPQHNA ENSBTAP00000028059/1-551 LPAQKVCLRC EAPCCQSHVQ THLQQPSTAR GHLLVEADDV RAWSCPQHNA 151 200 ENSTTRP00000011962/1-548 YRLYHCEAEQ VAVCQYCCYY SGAHQGHSVC DVEIRRNEIR ---------- bmy_15429T0/1-537 YRLYHCEAEQ VAVCQYCCYY SGAHQGHSVC D--------- ---------- BACU012359/1-572 YRLYHCEAEQ VAVCQYCCYY SGAHQGHSVC DVEIRRNEIR ATSQQPDSFT ENSP00000302120/1-551 YRLYHCEAEQ VAVCQYCCYY SGAHQGHSVC DVEIRRNEIR ---------- ENSBTAP00000028059/1-551 YRLYHCEAEQ VAVCQYCCYY SGAHQGHSVC DVEIRRNEIR ---------- 201 250 ENSTTRP00000011962/1-548 ----KMLMKQ QDRLEEREQD IEDQLYKLES DKRLVE---- ---EKVSQLK bmy_15429T0/1-537 ----KMLMKQ QDRLEEREQD IEDQLYKLES DKRLVE---- ---EKVSQLK BACU012359/1-572 GGIEKMLMKQ QDRLEEREQD IEDQLYKLES DKRLVEVAKP KPMEKVSQLK ENSP00000302120/1-551 ----KMLMKQ QDRLEEREQD IEDQLYKLES DKRLVE---- ---EKVNQLK ENSBTAP00000028059/1-551 ----KMLMKQ QDRLEEREQD IEDQLYKLES DKRLVE---- ---EKVSQLK 251 300 ENSTTRP00000011962/1-548 EEVRLQYEKL HQLLDEDLRQ TVEVLDK-QA KFCSENAA-A LHLGERMQEA bmy_15429T0/1-537 EEVRLQYEKL HQLLDEDLRQ TVEVLDKAQA KFCSENAAQA LHLGERMQEA BACU012359/1-572 EEVRLQYEKL HQLLDEDLRQ TVEVLDKAQA KFCSENAAQA LHLGERMQEA ENSP00000302120/1-551 EEVRLQYEKL HQLLDEDLRQ TVEVLDKAQA KFCSENAAQA LHLGERMQEA ENSBTAP00000028059/1-551 EEVRLQYEKL HQLLDEDLRQ TVEVLDKAQA KFCSENAAQA LHLGERMQEA 301 350 ENSTTRP00000011962/1-548 KKLLGSLQLL FD-TEDVSFM KNTKSVKILM DRTQTCTGSS LSPPKIGHLN bmy_15429T0/1-537 KKLLGSLQLL FDKTED---- -NTKSVKILM DRTQTCTGSS LSPPKIGHLN BACU012359/1-572 KKLLGSLQLL FDKTEDVSFM KNTKSVKILM DRTQTCTGSS LSPPKIGHLN ENSP00000302120/1-551 KKLLGSLQLL FDKTEDVSFM KNTKSVKILM DRTQTCTSSS LSPTKIGHLN ENSBTAP00000028059/1-551 KKLLGSLQLL FDKTEDVSFM KNTKSVKILM DRTQTCTGSS LSPPKIGHLN 351 400 ENSTTRP00000011962/1-548 SKLFLNEVAK KEKQLRKMLE GPFSTPVPFL QSVPLYPCGV SSSGAEKRKH bmy_15429T0/1-537 SKLFLNEVAK KEKQLRKMLE GPFSTPVPFL QSVPLYPCGV SSSGAEKRKH BACU012359/1-572 SKLFLNEVAK KEKQLRKMLE GPFSTPVPFL QSVPLYPCGV SSSGAEKRKH ENSP00000302120/1-551 SKLFLNEVAK KEKQLRKMLE GPFSTPVPFL QSVPLYPCGV SSSGAEKRKH ENSBTAP00000028059/1-551 SKLFLNEVAK KEKQLRKMLE GPFSTPVPFL QSVPLYPCGV SSSGAEKRKH 401 450 ENSTTRP00000011962/1-548 STAFPEASFL ETSSGPVGSQ YGAASTASGE GQSGQPLGPC SSTQHLVALP bmy_15429T0/1-537 STAFPEASFL ETSSGPVGSQ YGAASTASGE GQSGQPLGPC SSTQHLVALP BACU012359/1-572 STAFPEASFL ETSSGPVGSQ YGAASTASGE GQSGQPLGPC SSTQHLVALP ENSP00000302120/1-551 STAFPEASFL ETSSGPVGGQ YGAAGTASGE GQSGQPLGPC SSTQHLVALP ENSBTAP00000028059/1-551 STAFPEASFL ETSSGPVGGQ YGAAGTASGE GQSGQPLGPC SSTQHLVALP 451 500 ENSTTRP00000011962/1-548 GGAQPVHSSP VFPPSQYPNG SAAQQPMLPQ YGGRKILVCS VDNCYCSSVA bmy_15429T0/1-537 GGAQPVHSSP VFPPSQYPNG SAAQQPMLPQ YGGRKILVCS VDNCYCSSVA BACU012359/1-572 GGAQPVHSSP VFPPSQYPNG SAAQQPMLPQ YGGRKILVCS VDNCYCSSVA ENSP00000302120/1-551 GGAQPVHSSP VFPPSQYPNG SAAQQPMLPQ YGGRKILVCS VDNCYCSSVA ENSBTAP00000028059/1-551 GGAQPVHSSP VFPPSQYPNG SAAQQPMLPQ YGGRKILVCS VDNCYCSSVA 501 550 ENSTTRP00000011962/1-548 NHGGHQPYPR SGHFPWTVPS QEYSHALPPT PSVPQSLPSL AVRDWLDASQ bmy_15429T0/1-537 NHGGHQPYPR SGHFPWTVPS QEYSHALPPT PSVPQSLPSL AVRDWLDASQ BACU012359/1-572 NHGGHQPYPR SGHFPWTVPS QEYSHALPPT PSVPQSLPSL AVRDWLDASQ ENSP00000302120/1-551 NHGGHQPYPR SGHFPWTVPS QEYSHPLPPT PSVPQSLPSL AVRDWLDASQ ENSBTAP00000028059/1-551 NHGGHQPYPR SGHFPWTVPS QEYSHPLPPT PSVPQSLPGL AVRDWLDASQ 551 600 ENSTTRP00000011962/1-548 QPGHQDFYRV YGQPSTKHYV TS bmy_15429T0/1-537 QPGHQDFYRV YGQPSTKHYV TS BACU012359/1-572 QPGHQDFYRV YGQPSTKHYV TS ENSP00000302120/1-551 QPGHQDFYRV YGQPSTKHYV TS ENSBTAP00000028059/1-551 QPGHQDFYRV YGQPSTKHYV TS