KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:34:57 2014 Check: 00 .. Name: ENSP00000285393/1-350 Len: 385 Check: 4990 Weight: 1.00 Name: ENSBTAP00000028091/1-351 Len: 385 Check: 8432 Weight: 1.00 Name: ENSTTRP00000002684/1-350 Len: 385 Check: 7788 Weight: 1.00 Name: bmy_15817T0/1-248 Len: 385 Check: 8726 Weight: 1.00 Name: BACU006251/1-351 Len: 385 Check: 5691 Weight: 1.00 // 1 50 ENSP00000285393/1-350 MLEGAELYFN VDHGYLEGLV RGCKASLLTQ QDYINLVQCE TLEDLKIHLQ ENSBTAP00000028091/1-351 MLESAELNFN ADHGYLEGLV RGCKAGLLTR RDYVNLVQCE NLEDLKIHLQ ENSTTRP00000002684/1-350 MLEGAELYFN ADHGYLEGLV RGCKAGLLTQ RDYINLVQCE TLEDLKIHLQ bmy_15817T0/1-248 ---------- ---------- ---------- ---------- ---------- BACU006251/1-351 MLEGAELYFN ADHGYLEGLV RGCKAGLLTQ QDYINLVQCE TLEDLKIHLQ 51 100 ENSP00000285393/1-350 TTDYGNFLAN HTNPLTVSKI DTEMRKRLCG EFEYFRNHSL EPLSTFLTYM ENSBTAP00000028091/1-351 TTDYGNFLAN QATPLTVSVI DTEMRKKLCR EFEYFRNHSL EPLSTFFTYM ENSTTRP00000002684/1-350 TTDYGNFLAN QTNPLTVSII DTEMRKKLCR EFEYFRNHSX XXXXXXXXXX bmy_15817T0/1-248 ---------- ---------- ---------- ---------- ---------- BACU006251/1-351 TTDYGNFLAN QTNPLTVSII DTEMRKKLCR EFEYFRNHSL EPLSTFFTYM 101 150 ENSP00000285393/1-350 TCSYMIDNVI LLMNGALQKK SVKEILGKCH PLGRFTEMEA VNIAETPSDL ENSBTAP00000028091/1-351 TCSYMIDNVI LLMNGALQNK PVKDVLVKCH PLGHFTEMEA VNIAETPSDL ENSTTRP00000002684/1-350 XCSYMIDNVI LLMNGALQKK SVKEILVKCH PLGRFTEMEA VNIAETPSDL bmy_15817T0/1-248 ---------- ---------- ---------- -------MEA VNIAETPSDL BACU006251/1-351 MCSYMIDNVI LLMNGALQKK SVKEILVKCH PLGRFTEMEA VNIAETPSDL 151 200 ENSP00000285393/1-350 FNAILIETPL APFFQDCMSE NALDELNIEL LRNKLYKSYL EAFYKFCKNH ENSBTAP00000028091/1-351 FNAILVETPL APFFQDCTSE NALDELNIEI LRNKLYKSYI EAFYKFCKNH ENSTTRP00000002684/1-350 FNAILVETPL APFFQDCMSE NTLDELNIEI LRNKLYKSYI EAFYKFCKNH bmy_15817T0/1-248 FNAILVETPL APFFQDCMSE NTLDELNIEI LRNKLYKSYI EAFYKFCKNH BACU006251/1-351 FNAILVETPL APFFQDCMSE NTLDELNIEI LRNKLYKSYI EAFYKFCKNH 201 250 ENSP00000285393/1-350 GDVTAEVMCP ILE------- ---------- ---------- FEADRRAFII ENSBTAP00000028091/1-351 GDVTAEVMCP ILE------- ---------- ---------- FEADRRAFII ENSTTRP00000002684/1-350 GDVTAEIMCP ILE------- ---------- ---------- FEADRRAFII bmy_15817T0/1-248 GDVTAEIMCP ILEISSVPTG PLACNVNLHM HEGLRPEIRM FEADRRAFII BACU006251/1-351 GDVTAEIMCP ILE------- ---------- ---------- FEADRRAFII 251 300 ENSP00000285393/1-350 TLNSFGTELS KEDRETLYPT FGKLYPEGLR LLAQAEDFDQ MKNVADHYGV ENSBTAP00000028091/1-351 TLNSFGTELS KEDRETLYPT CGKLHPEGLR LLAQAEDFEQ MKRVADSYGV ENSTTRP00000002684/1-350 TLNSFGTELS KEDRETLYPT CGKLYPEGLR LLAQAEDFEQ MKRVADH-GV bmy_15817T0/1-248 TLNSFGTELS KEDRETLYPT CGKLYPEGLR LLAQAEDFEQ MKRVADHYGV BACU006251/1-351 TLNSFGTELS KEDRETLYPT CGKLYPEGLR LLAQAEDFEQ MKRVADHYGV 301 350 ENSP00000285393/1-350 YKPLFEAVG- GSGGKTLEDV FYERE----- --VQMNVLAF NRQFHYGVFY ENSBTAP00000028091/1-351 YKPLFEAVSD SSGGKTLEDV FYERE----- --VQMNVLAF NRQFHYGVFY ENSTTRP00000002684/1-350 YKALFEAVGD GSGGKTLEDV FYERE----- --VQMNVLAF NRQFHYGVFY bmy_15817T0/1-248 YKPLFEAVGD GSGGKTLEDV FYERELIRPI DYVQMNVLAF NRQFHYGVFY BACU006251/1-351 YKPLFEAVGD GSGGKTLEDV FYERE----- --VQMNVLAF NRQFHYGVFY 351 400 ENSP00000285393/1-350 AYVKLKEQEI RNIVWIAECI SQRHRTKINS YIPIL ENSBTAP00000028091/1-351 AYTKLKEQEM RNIVWIAECI SQRQRTKINS YIPIL ENSTTRP00000002684/1-350 AYTKLKEQEI RNVVWIAECI SQRHRTKINS YIPIL bmy_15817T0/1-248 AYTKLKEQEM RNVVWIAECI SQRHRTKINS YIPIL BACU006251/1-351 AYTKLKEQEM RNVVWIAECI SQRHRTKINS YIPIL