KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:01 2014 Check: 00 .. Name: BACU002773/1-481 Len: 482 Check: 2314 Weight: 1.00 Name: ENSP00000314223/1-384 Len: 482 Check: 6569 Weight: 1.00 Name: ENSBTAP00000028110/1-383 Len: 482 Check: 3907 Weight: 1.00 Name: bmy_21722T0/1-382 Len: 482 Check: 493 Weight: 1.00 Name: ENSTTRP00000008871/1-383 Len: 482 Check: 2783 Weight: 1.00 // 1 50 BACU002773/1-481 MTNS-STSTS SATGGSLLLL CEEEESWAGR RIPVSLLYSG LAIGGTLANG ENSP00000314223/1-384 MTNSSSTSTS STTGGSLLLL CEEEESWAGR RIPVSLLYSG LAIGGTLANG ENSBTAP00000028110/1-383 MTNS-STSTS STTGGSLLLL CEEEESWAGR RIPVSLLYSG LAIGGTLANG bmy_21722T0/1-382 MTNS-STSTS SATGGSLLLL CEEEESWAGR RIPVSLLYSG LAIGGTLANG ENSTTRP00000008871/1-383 MTNS-STSTS SATGGSLLLL CEEEESWAGR RIPVSLLYSG LAIGGTLANG 51 100 BACU002773/1-481 MVIYLVSSFR KLQTTSNAFI VNGCAADLSV CALWMPQEAV LGLLPAGSAE ENSP00000314223/1-384 MVIYLVSSFR KLQTTSNAFI VNGCAADLSV CALWMPQEAV LGLLPTGSAE ENSBTAP00000028110/1-383 MVIYLVSSFR KLQTTSNAFI VNGCAADLSV CALWMPQEAV LGLLPAGSVE bmy_21722T0/1-382 MVIYLVSSFR KLQTTSNAFI VNGCAADLSV CALWMPQEAV LGLLPAGSAE ENSTTRP00000008871/1-383 MVIYLVSSFR KLQTTSNAFI VNGCAADLSV CALWMPQEAV LGLLPAGSAE 101 150 BACU002773/1-481 PPGDWXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000314223/1-384 PPADWDGAGG SYRLLRGGLL GLGLTVSLLS HCLVALNRYL LITRAPATYQ ENSBTAP00000028110/1-383 PPGDWDGAGG SYRLLRGGLL GLGLTVSLLS HCLVALNRYL LITRAPATYQ bmy_21722T0/1-382 PPGDWDGAGG SYRLLRGGLL GLGLTVSLLS HCLVALNRYL LITRAPATYQ ENSTTRP00000008871/1-383 PPGDWDGAGG SYRLLRGGLL GLGLTVSLLS HCLVALNRYL LITRAPATYQ 151 200 BACU002773/1-481 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000314223/1-384 ALYQRRHTAG MLALSWALAL GLVLLLPPWA PRPGAAPPRV HYPALLAAAA ENSBTAP00000028110/1-383 ALYQRRHTAG MLALSWALAL GLVLLLPPWA PRPGAAPPRV HYPALLAAGA bmy_21722T0/1-382 ALYQRRHTAG MLALSWALAL GLVLLLPPWA PRPGAAPPRV HYPALLAAAA ENSTTRP00000008871/1-383 ALYQRRHTAG MLALSWALAL GLVLLLPPWA PRPGAAPPRV HYPALLAAAA 201 250 BACU002773/1-481 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000314223/1-384 LLAQTALLLH CYLGIVRRVR VSVKRVSVLN FHLLHQLPGC AAAAAAFPGA ENSBTAP00000028110/1-383 LLAQTALLLH CYLGIVRRVR VSVKRVSVLN FHLLHQLPGC AAAAAAFPGA bmy_21722T0/1-382 LLAQTALLLH CYLGIVRRVR VSVKRVSVLN FHLLHQLPGC -AAAAAFPGA ENSTTRP00000008871/1-383 LLAQTALLLH CYLGIVRRVR VSVKRVSVLN FHLLHQLPGC -AAAAAFPGA 251 300 BACU002773/1-481 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000314223/1-384 QHAPGPGGAA HPAQAQPLPP ALHPRRAQRR LSGLSVLLLC CVFLLATQPL ENSBTAP00000028110/1-383 PHAPGPGGAQ LPAQAQPLPA ALHPRRAQRR LSGLSVLLLC CVFLLATQPL bmy_21722T0/1-382 PHAPGPAGTA HPAQAQPLPP ALHPRRAQRR LSGLSVLLLC CVFLLATQPL ENSTTRP00000008871/1-383 PHAPGPGGAA HPAQAQPLPP ALHPRRAQRR LSGLSVLLLC CVFLLATQPL 301 350 BACU002773/1-481 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000314223/1-384 VWVSLASGFS LPVPWGVQAA SWLLCCALSA LNPLLYTWRN EEFRRSVRSV ENSBTAP00000028110/1-383 VWVSLASGFS LPVPWGVQAA SWLLCCALSA LNPLLYTWRN EEFRRSVRSV bmy_21722T0/1-382 VWVSLASGFS LPVPWGVQAA SWLLCCALSA LNPLLYTWRN EEFRRSVRSV ENSTTRP00000008871/1-383 VWVSLASGFS LPVPWGVQAA SWLLCCALSA LNPLLYTWRN EEFRRSVRSV 351 400 BACU002773/1-481 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000314223/1-384 LPGVGD-AAA AAVAATA--- ---------- ---------- ---------- ENSBTAP00000028110/1-383 LPGIGD-AAA AAAAATA--- ---------- ---------- ---------- bmy_21722T0/1-382 LPGIGD-AAA AAAAATA--- ---------- ---------- ---------- ENSTTRP00000008871/1-383 LPGIGDAAAA AAAAATA--- ---------- ---------- ---------- 401 450 BACU002773/1-481 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXWALAP QASTGDPGRA ENSP00000314223/1-384 ---------- ---------- ---------- --------VP AVSQAQLGTR ENSBTAP00000028110/1-383 ---------- ---------- ---------- --------VP AVSQAQLGTR bmy_21722T0/1-382 ---------- ---------- ---------- --------VP AVSQAQLGTR ENSTTRP00000008871/1-383 ---------- ---------- ---------- --------MP AVSQAQLGTR 451 500 BACU002773/1-481 GGKRRFPASI ALGHHRLVIL ESIPCLNEDS CG ENSP00000314223/1-384 AAGQHW---- ---------- ---------- -- ENSBTAP00000028110/1-383 AAGQHW---- ---------- ---------- -- bmy_21722T0/1-382 AAGQHW---- ---------- ---------- -- ENSTTRP00000008871/1-383 AAGQHW---- ---------- ---------- --