KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:35:01 2014 Check: 00 .. Name: ENSTTRP00000000101/1-524 Len: 524 Check: 8654 Weight: 1.00 Name: ENSP00000245680/1-523 Len: 524 Check: 3954 Weight: 1.00 Name: ENSBTAP00000028113/1-524 Len: 524 Check: 6806 Weight: 1.00 Name: bmy_16583T0/1-511 Len: 524 Check: 5991 Weight: 1.00 Name: BACU014927/1-524 Len: 524 Check: 4659 Weight: 1.00 // 1 50 ENSTTRP00000000101/1-524 MVPPRHHRGA RRPGALSFSP PFRLKSDQFS GAALEDLKKA FKIRLQMVCV ENSP00000245680/1-523 MVPPRRHRGA GRPGVLSSSP PFRLRSAKFS GIALEDLRRA LKTRLQMVCV ENSBTAP00000028113/1-524 MVPPRHHPGA GRPGALSSSP PFRLRSSKFS GIALQDLRKA FKIRLQMVCV bmy_16583T0/1-511 ---------- ---GALSSSP PFRLRSAQFS GTALEDLRKA FKIRLQMVCV BACU014927/1-524 MVPPRHHRGA GRPGALSSSP PFRLRSAQFS GTALEDLRKA FKIRLQMVCV 51 100 ENSTTRP00000000101/1-524 FIMNRMNSQS SGFTQRRRMA LGIVILLLVD VIWVASSELT SXXXXXXXXX ENSP00000245680/1-523 FVMNRMNSQN SGFTQRRRMA LGIVILLLVD VIWVASSELT SYVFTQYNKP ENSBTAP00000028113/1-524 FIMNRMNSQS SGFTQRKRMA LGIVILLLVD VIWVASSELT SYVFTQYNKP bmy_16583T0/1-511 FIMNRMNSQS SGFTQRRRMA LGIVILLLVD VIWVASSELT SYVFTQYNKP BACU014927/1-524 FIMNRMNSQS SGFTQRRRMA LGIVILLLVD VIWVASSELT SYVFTQYNKP 101 150 ENSTTRP00000000101/1-524 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXF ADAEGYFAAC ENSP00000245680/1-523 FFSTFAKTSM FVLYLLGFII WKPWRQQCTR GLRGKHAAFF ADAEGYFAAC ENSBTAP00000028113/1-524 FFSTFAKTSM FVLYLLGFIV WKPWRQQCTR GFRGKHATFF ADAEGYFAAC bmy_16583T0/1-511 FFSTFAKTSM FVLYLLGFII WKPWRQQCTR GFRGKHAAFF ADAEGYFAAC BACU014927/1-524 FFSTFAKTSM FVLYLLGFII WKPWRQQCTR GFRGKHAAFF ADAEGYFAAC 151 200 ENSTTRP00000000101/1-524 TTDTTMNSSL SEPLYVPVKF HDLPSEKPEN TNTDTEKSPK KSRVRFSNIM ENSP00000245680/1-523 TTDTTMNSSL SEPLYVPVKF HDLPSEKPES TNIDTEKTPK KSRVRFSNIM ENSBTAP00000028113/1-524 TTDTTMNSSL SEPLYVPVKF HDLPSEKPEN TNIDTEKIPK KSRVRFSNIM bmy_16583T0/1-511 TTDTTMNSSL SEPLYVPVKF HDLPSEKPEN TNIDTEKSPK KSRVRFSNIM BACU014927/1-524 TTDTTMNSCL SEPLYVPVKF HDLPSEKPEN TNIDTEKSPK KSRVRFSNIM 201 250 ENSTTRP00000000101/1-524 EIRQLPSSHA LEAKLSRMSY PTVKEQESLL KTVGKLTATQ VAKISFFFCF ENSP00000245680/1-523 EIRQLPSSHA LEAKLSRMSY P-VKEQESIL KTVGKLTATQ VAKISFFFCF ENSBTAP00000028113/1-524 EIRQLPSSHA LEAKLSRMSY PTVKEQESLL KTVGKLTATQ VAKISFFFCF bmy_16583T0/1-511 EIRQLPSSHA LEAKLSRMSY PTVKEQESLL KTVGKLTATQ VAKISFFFCF BACU014927/1-524 EIRQLPSSHA LEAKLSRMSY PTVKEQESLL KTVGKLTATQ VAKISFFFCF 251 300 ENSTTRP00000000101/1-524 VWFLANLSYQ EALSDTKVAI VNILSSTSGL FTLILAAMFP SNSGDRFTLS ENSP00000245680/1-523 VWFLANLSYQ EALSDTQVAI VNILSSTSGL FTLILAAVFP SNSGDRFTLS ENSBTAP00000028113/1-524 VWFLANFSYQ EALSDTQVAI VNILSSTSGL FTLILAAMFP SNSGDRFTLS bmy_16583T0/1-511 VWFLANLSYQ EALSDTKVAI VNILSSTSGL FTLILAAMFP SNSGDRFTLS BACU014927/1-524 VWFLANLSYQ EALSDTKVAI VNILSSTSGL FTLILAAMFP SNSGDRFTLS 301 350 ENSTTRP00000000101/1-524 KLLAVILSIG GVVLVNLSES EKSAGRDPIG SIWSLVGAML YAVYIVMIKR ENSP00000245680/1-523 KLLAVILSIG GVVLVNLAGS EKPAGRDTVG SIWSLAGAML YAVYIVMIKR ENSBTAP00000028113/1-524 KLLAVILSIG GVVLVNLSGS EKSPGRNTIG SIWSLVGAML YAVYIVMIKR bmy_16583T0/1-511 KLLAVILSIG GVVLVNLSGS EKSAGRDPIG SIWSLVGAML YAVYIVMIKR BACU014927/1-524 KLLAVILSIG GVVLVNLSES EKSAGRDPIG SIWSLVGAML YAVYIVMIKR 351 400 ENSTTRP00000000101/1-524 KVDREDKLDI PMFFGFVGLF NLLLLWPGFF LLHYTGFEDF EFPNKVVLMC ENSP00000245680/1-523 KVDREDKLDI PMFFGFVGLF NLLLLWPGFF LLHYTGFEDF EFPNKVVLMC ENSBTAP00000028113/1-524 KVDREDKLDI PMFFGFVGLF NLLLLWPGFF LLHYTGFEDF EFPNKVVLMC bmy_16583T0/1-511 KVDREDKLDI PMFFGFVGLF NLLLLWPGFF LLHYTGFEDF EFPNKVVLMC BACU014927/1-524 KVDREDKLDI PMFFGFVGLF NLLLLWPGFF LLHYTGFEDF EFPNKVVLMC 401 450 ENSTTRP00000000101/1-524 IIINGLIGTV LSEFLWLWGC FLTSSLIGTL ALSLTIPLSI IADMCMQKVQ ENSP00000245680/1-523 IIINGLIGTV LSEFLWLWGC FLTSSLIGTL ALSLTIPLSI IADMCMQKVQ ENSBTAP00000028113/1-524 IVINGLIGTV LSEFLWLWGC FLTSSLIGTL ALSLTIPLSI IADMCMQKVQ bmy_16583T0/1-511 IIINGLIGTV LSEFLWLWGC FLTSSLIGTL ALSLTIPLSI IADMCMQKVQ BACU014927/1-524 IIINGLIGTV LSEFLWLWGC FLTSSLIGTL ALSLTIPLSI IADMCMQKVQ 451 500 ENSTTRP00000000101/1-524 FSWLFFAGAI PVFFSFFIVT LLCHYNNWDP VMVGIRRIFA FICRKHRIQR ENSP00000245680/1-523 FSWLFFAGAI PVFFSFFIVT LLCHYNNWDP VMVGIRRIFA FICRKHRIQR ENSBTAP00000028113/1-524 FSWLFFAGAI PVFFSFFIAT LLCHYNNWDP VMVGIRRIFA FICRKHRIQK bmy_16583T0/1-511 FSWLFFAGAI PVFFSFFIVT LLCHYNNWDP VMVGIRRIFA FICRKHRIQR BACU014927/1-524 FSWLFFAGAI PVFFSFFIVT LLCHYNNWDP VMVGIRRIFA FICRKHRIQR 501 550 ENSTTRP00000000101/1-524 VPEDSEQCES LIPMHGVSQE DGAS ENSP00000245680/1-523 VPEDSEQCES LISMHSVSQE DGAS ENSBTAP00000028113/1-524 VPEDSEQCES LIPMHGVSQE DGAS bmy_16583T0/1-511 VPEDSEQCES LIPLHGVSQE DGAS BACU014927/1-524 VPEDSEQCES LIPMHGVSQE DGAS